RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 CAVIN1Q6NZI2 390 aaKnown RBP12.86□□□□□ -0.35
ERCC3-201ENST00000285398 CHD1LQ86WJ1 897 aa12.86□□□□□ -0.35
ERCC3-201ENST00000285398 RAPGEF4Q8WZA2 1011 aa12.86□□□□□ -0.35
ERCC3-201ENST00000285398 RTF1Q92541 710 aaKnown RBP12.86□□□□□ -0.35
ERCC3-201ENST00000285398 ABCA3Q99758 1704 aa12.86□□□□□ -0.35
ERCC3-201ENST00000285398 TMEM132AQ24JP5 1023 aa12.86□□□□□ -0.35
ERCC3-201ENST00000285398 IL17REQ8NFR9 667 aa12.86□□□□□ -0.35
ERCC3-201ENST00000285398 CCDC39Q9UFE4 941 aa12.86□□□□□ -0.35
ERCC3-201ENST00000285398 NCLP19338 710 aaKnown RBP12.85□□□□□ -0.35
ERCC3-201ENST00000285398 GAS2L2Q8NHY3 880 aa12.85□□□□□ -0.35
ERCC3-201ENST00000285398 CCDC94Q9BW85 323 aaPredicted RBP12.85□□□□□ -0.35
ERCC3-201ENST00000285398 LNPKQ9C0E8 428 aa12.85□□□□□ -0.35
ERCC3-201ENST00000285398 MBIPQ9NS73 344 aa12.85□□□□□ -0.35
ERCC3-201ENST00000285398 NOB1Q9ULX3 412 aaKnown RBP12.85□□□□□ -0.35
ERCC3-201ENST00000285398 WDR17Q8IZU2 1322 aa12.85□□□□□ -0.35
ERCC3-201ENST00000285398 MCTP1Q6DN14 999 aa12.85□□□□□ -0.35
ERCC3-201ENST00000285398 TSPYL6Q8N831 410 aa12.85□□□□□ -0.35
ERCC3-201ENST00000285398 C8orf37Q96NL8 207 aa12.85□□□□□ -0.35
ERCC3-201ENST00000285398 RBSNQ9H1K0 784 aa12.85□□□□□ -0.35
ERCC3-201ENST00000285398 COL5A2P05997 1499 aaPredicted RBP12.84□□□□□ -0.35
ERCC3-201ENST00000285398 IL16Q14005 1332 aa12.84□□□□□ -0.35
ERCC3-201ENST00000285398 DLG5Q8TDM6 1919 aa12.84□□□□□ -0.35
ERCC3-201ENST00000285398 GNAT3A8MTJ3 354 aa12.84□□□□□ -0.35
ERCC3-201ENST00000285398 MEGF6O75095 1541 aa12.84□□□□□ -0.35
ERCC3-201ENST00000285398 DMTNQ08495 405 aa12.83□□□□□ -0.36
ERCC3-201ENST00000285398 LMBRD1Q9NUN5 540 aa12.83□□□□□ -0.36
ERCC3-201ENST00000285398 IPO8O15397 1037 aaKnown RBP12.82□□□□□ -0.36
ERCC3-201ENST00000285398 PRIM1P49642 420 aaKnown RBP12.82□□□□□ -0.36
ERCC3-201ENST00000285398 LMOD3Q0VAK6 560 aa12.82□□□□□ -0.36
ERCC3-201ENST00000285398 PLEKHO1Q53GL0 409 aaPredicted RBP12.82□□□□□ -0.36
ERCC3-201ENST00000285398 TATP17735 454 aaPredicted RBP12.81□□□□□ -0.36
ERCC3-201ENST00000285398 SAMD1Q6SPF0 538 aaPredicted RBP12.81□□□□□ -0.36
ERCC3-201ENST00000285398 C8orf58Q8NAV2 365 aa12.81□□□□□ -0.36
ERCC3-201ENST00000285398 DDX54Q8TDD1 881 aaKnown RBP12.81□□□□□ -0.36
ERCC3-201ENST00000285398 CCDC9Q9Y3X0 531 aaKnown RBP12.81□□□□□ -0.36
ERCC3-201ENST00000285398 MAP3K5Q99683 1374 aa12.81□□□□□ -0.36
ERCC3-201ENST00000285398 TBC1D9Q6ZT07 1266 aa12.81□□□□□ -0.36
ERCC3-201ENST00000285398 CFAP44Q96MT7 982 aa12.81□□□□□ -0.36
ERCC3-201ENST00000285398 ARID3AQ99856 593 aa12.81□□□□□ -0.36
ERCC3-201ENST00000285398 CYP27B1O15528 508 aa12.81□□□□□ -0.36
ERCC3-201ENST00000285398 RABEP1Q15276 862 aa12.81□□□□□ -0.36
ERCC3-201ENST00000285398 C1orf141Q5JVX7 400 aa12.81□□□□□ -0.36
ERCC3-201ENST00000285398 NGLY1Q96IV0 654 aa12.81□□□□□ -0.36
ERCC3-201ENST00000285398 RBM42Q9BTD8 480 aaKnown RBP12.81□□□□□ -0.36
ERCC3-201ENST00000285398 COL22A1Q8NFW1 1626 aaPredicted RBP12.8□□□□□ -0.36
ERCC3-201ENST00000285398 GCC1Q96CN9 775 aa12.8□□□□□ -0.36
ERCC3-201ENST00000285398 CWC22Q9HCG8 908 aaKnown RBP12.8□□□□□ -0.36
ERCC3-201ENST00000285398 LMO7Q8WWI1 1683 aa12.8□□□□□ -0.36
ERCC3-201ENST00000285398 ZNF853P0CG23 659 aa12.8□□□□□ -0.36
ERCC3-201ENST00000285398 GNAI1P63096 354 aa12.8□□□□□ -0.36
ERCC3-201ENST00000285398 ALDH1L2Q3SY69 923 aa12.8□□□□□ -0.36
ERCC3-201ENST00000285398 LRSAM1Q6UWE0 723 aa12.8□□□□□ -0.36
ERCC3-201ENST00000285398 IFT57Q9NWB7 429 aa12.8□□□□□ -0.36
ERCC3-201ENST00000285398 TSPYL4Q9UJ04 414 aa12.8□□□□□ -0.36
ERCC3-201ENST00000285398 ZHX1Q9UKY1 873 aaPredicted RBP12.8□□□□□ -0.36
ERCC3-201ENST00000285398 KCNQ3O43525 872 aa12.79□□□□□ -0.36
ERCC3-201ENST00000285398 CYP2E1P05181 493 aaPredicted RBP12.79□□□□□ -0.36
ERCC3-201ENST00000285398 PRDM10Q9NQV6 1147 aa12.79□□□□□ -0.36
ERCC3-201ENST00000285398 KIAA2012Q0VF49 1180 aa12.79□□□□□ -0.36
ERCC3-201ENST00000285398 MYRIPQ8NFW9 859 aa12.79□□□□□ -0.36
ERCC3-201ENST00000285398 NECTIN2Q92692 538 aa12.79□□□□□ -0.36
ERCC3-201ENST00000285398 CARD10Q9BWT7 1032 aa12.79□□□□□ -0.36
ERCC3-201ENST00000285398 CHMP4BQ9H444 224 aaKnown RBP12.79□□□□□ -0.36
ERCC3-201ENST00000285398 FBXO3Q9UK99 471 aa12.79□□□□□ -0.36
ERCC3-201ENST00000285398 CRB1P82279 1406 aa12.79□□□□□ -0.36
ERCC3-201ENST00000285398 ZSCAN20P17040 1043 aaPredicted RBP12.78□□□□□ -0.36
ERCC3-201ENST00000285398 AMOTQ4VCS5 1084 aa12.78□□□□□ -0.36
ERCC3-201ENST00000285398 HMGN5P82970 282 aaKnown RBP12.78□□□□□ -0.36
ERCC3-201ENST00000285398 AKAP4Q5JQC9 854 aa12.78□□□□□ -0.36
ERCC3-201ENST00000285398 ANKRD45Q5TZF3 282 aa12.78□□□□□ -0.36
ERCC3-201ENST00000285398 PRIMPOLQ96LW4 560 aa12.78□□□□□ -0.36
ERCC3-201ENST00000285398 GTPBP4Q9BZE4 634 aaKnown RBP12.78□□□□□ -0.36
ERCC3-201ENST00000285398 JCADQ9P266 1359 aa12.78□□□□□ -0.36
ERCC3-201ENST00000285398 NCAPD2Q15021 1401 aa12.78□□□□□ -0.36
ERCC3-201ENST00000285398 CHL1O00533 1208 aa12.77□□□□□ -0.36
ERCC3-201ENST00000285398 PRPF40AO75400 957 aaKnown RBP12.77□□□□□ -0.36
ERCC3-201ENST00000285398 CDC45O75419 566 aa12.77□□□□□ -0.36
ERCC3-201ENST00000285398 IL2RBP14784 551 aa12.77□□□□□ -0.36
ERCC3-201ENST00000285398 BRPF1P55201 1214 aaPredicted RBP12.77□□□□□ -0.36
ERCC3-201ENST00000285398 PHKG2P15735 406 aa12.77□□□□□ -0.37
ERCC3-201ENST00000285398 FAM208AQ9UK61 1670 aaKnown RBP12.77□□□□□ -0.37
ERCC3-201ENST00000285398 KIF20AO95235 890 aa12.76□□□□□ -0.37
ERCC3-201ENST00000285398 PTMAP06454 111 aaKnown RBP12.76□□□□□ -0.37
ERCC3-201ENST00000285398 TEFQ10587 303 aa12.76□□□□□ -0.37
ERCC3-201ENST00000285398 SLC39A6Q13433 755 aa12.76□□□□□ -0.37
ERCC3-201ENST00000285398 TWISTNBQ3B726 338 aaPredicted RBP12.76□□□□□ -0.37
ERCC3-201ENST00000285398 RNMTO43148 476 aaKnown RBP12.76□□□□□ -0.37
ERCC3-201ENST00000285398 DNTTIP2Q5QJE6 756 aaKnown RBP12.76□□□□□ -0.37
ERCC3-201ENST00000285398 ZCRB1Q8TBF4 217 aaKnown RBP12.76□□□□□ -0.37
ERCC3-201ENST00000285398 SPG7Q9UQ90 795 aa12.76□□□□□ -0.37
ERCC3-201ENST00000285398 ABCC6O95255 1503 aa12.76□□□□□ -0.37
ERCC3-201ENST00000285398 NFATC2IPQ8NCF5 419 aa12.75□□□□□ -0.37
ERCC3-201ENST00000285398 GPT2Q8TD30 523 aa12.75□□□□□ -0.37
ERCC3-201ENST00000285398 ZNF428Q96B54 188 aa12.75□□□□□ -0.37
ERCC3-201ENST00000285398 LRP6O75581 1613 aa12.75□□□□□ -0.37
ERCC3-201ENST00000285398 AK9Q5TCS8 1911 aa12.75□□□□□ -0.37
ERCC3-201ENST00000285398 ZBTB7BO15156 539 aaPredicted RBP12.75□□□□□ -0.37
ERCC3-201ENST00000285398 VAMP4O75379 141 aa12.75□□□□□ -0.37
ERCC3-201ENST00000285398 MBD3O95983 291 aa12.75□□□□□ -0.37
ERCC3-201ENST00000285398 MEX3CQ5U5Q3 659 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms