RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 HSCBQ8IWL3 235 aa11.11□□□□□ -0.63
CCDC144B-201ENST00000285176 FAM89AQ96GI7 184 aa11.11□□□□□ -0.63
CCDC144B-201ENST00000285176 ADAMTSL3P82987 1691 aa11.11□□□□□ -0.63
CCDC144B-201ENST00000285176 ZBTB7BO15156 539 aaPredicted RBP11.11□□□□□ -0.63
CCDC144B-201ENST00000285176 CERKQ8TCT0 537 aa11.11□□□□□ -0.63
CCDC144B-201ENST00000285176 DNAJC2Q99543 621 aaKnown RBP11.11□□□□□ -0.63
CCDC144B-201ENST00000285176 ZBTB40Q9NUA8 1239 aa11.11□□□□□ -0.63
CCDC144B-201ENST00000285176 ZNF853P0CG23 659 aa11.1□□□□□ -0.63
CCDC144B-201ENST00000285176 CARD10Q9BWT7 1032 aa11.1□□□□□ -0.63
CCDC144B-201ENST00000285176 GOLGB1Q14789 3259 aaKnown RBP11.1□□□□□ -0.63
CCDC144B-201ENST00000285176 PNMA6EA0A0J9YXQ4 647 aa11.1□□□□□ -0.63
CCDC144B-201ENST00000285176 PIGBQ92521 554 aa11.1□□□□□ -0.63
CCDC144B-201ENST00000285176 HYPKQ9NX55 129 aa11.1□□□□□ -0.63
CCDC144B-201ENST00000285176 TRMT112Q9UI30 125 aaKnown RBP11.1□□□□□ -0.63
CCDC144B-201ENST00000285176 SOS2Q07890 1332 aaPredicted RBP11.09□□□□□ -0.63
CCDC144B-201ENST00000285176 QTRT2Q9H974 415 aaKnown RBP11.09□□□□□ -0.63
CCDC144B-201ENST00000285176 ITSN1Q15811 1721 aa11.09□□□□□ -0.63
CCDC144B-201ENST00000285176 HTATSF1O43719 755 aaKnown RBP11.09□□□□□ -0.63
CCDC144B-201ENST00000285176 IPO9Q96P70 1041 aaKnown RBP11.09□□□□□ -0.63
CCDC144B-201ENST00000285176 FOXD4L5Q5VV16 416 aaPredicted RBP11.09□□□□□ -0.63
CCDC144B-201ENST00000285176 FOXD4L4Q8WXT5 416 aaPredicted RBP11.09□□□□□ -0.63
CCDC144B-201ENST00000285176 ANO2Q9NQ90 1003 aa11.09□□□□□ -0.63
CCDC144B-201ENST00000285176 ZNF219Q9P2Y4 722 aaPredicted RBP11.09□□□□□ -0.63
CCDC144B-201ENST00000285176 FGD1P98174 961 aa11.08□□□□□ -0.64
CCDC144B-201ENST00000285176 AACSQ86V21 672 aa11.08□□□□□ -0.64
CCDC144B-201ENST00000285176 NDUFB9Q9Y6M9 179 aa11.08□□□□□ -0.64
CCDC144B-201ENST00000285176 STK11IPQ8N1F8 1099 aa11.08□□□□□ -0.64
CCDC144B-201ENST00000285176 RNF123Q5XPI4 1314 aa11.08□□□□□ -0.64
CCDC144B-201ENST00000285176 FOXD4L6Q3SYB3 417 aaPredicted RBP11.08□□□□□ -0.64
CCDC144B-201ENST00000285176 FOXD4L3Q6VB84 417 aaPredicted RBP11.08□□□□□ -0.64
CCDC144B-201ENST00000285176 CLASRPQ8N2M8 674 aaKnown RBP11.08□□□□□ -0.64
CCDC144B-201ENST00000285176 LRRCC1Q9C099 1032 aa11.08□□□□□ -0.64
CCDC144B-201ENST00000285176 PTPRCP08575 1304 aa11.07□□□□□ -0.64
CCDC144B-201ENST00000285176 KSR2Q6VAB6 950 aa11.07□□□□□ -0.64
CCDC144B-201ENST00000285176 HELBQ8NG08 1087 aaPredicted RBP11.07□□□□□ -0.64
CCDC144B-201ENST00000285176 LMBR1LQ6UX01 489 aa11.07□□□□□ -0.64
CCDC144B-201ENST00000285176 TRIM44Q96DX7 344 aaPredicted RBP11.07□□□□□ -0.64
CCDC144B-201ENST00000285176 DDX21Q9NR30 783 aaKnown RBP eCLIP11.07□□□□□ -0.64
CCDC144B-201ENST00000285176 CNNM1Q9NRU3 951 aa11.07□□□□□ -0.64
CCDC144B-201ENST00000285176 ZNF594Q96JF6 807 aaPredicted RBP11.07□□□□□ -0.64
CCDC144B-201ENST00000285176 TRIM37O94972 964 aa11.06□□□□□ -0.64
CCDC144B-201ENST00000285176 BOLA2Q9H3K6 86 aa11.06□□□□□ -0.64
CCDC144B-201ENST00000285176 ZBTB1Q9Y2K1 713 aa11.06□□□□□ -0.64
CCDC144B-201ENST00000285176 SEC24BO95487 1268 aa11.06□□□□□ -0.64
CCDC144B-201ENST00000285176 CEP85Q6P2H3 762 aa11.06□□□□□ -0.64
CCDC144B-201ENST00000285176 IQSEC3Q9UPP2 1182 aaPredicted RBP11.06□□□□□ -0.64
CCDC144B-201ENST00000285176 HCLS1P14317 486 aaPredicted RBP11.06□□□□□ -0.64
CCDC144B-201ENST00000285176 DZIP3Q86Y13 1208 aaKnown RBP11.06□□□□□ -0.64
CCDC144B-201ENST00000285176 SYNE4Q8N205 404 aa11.06□□□□□ -0.64
CCDC144B-201ENST00000285176 SNRKQ9NRH2 765 aa11.06□□□□□ -0.64
CCDC144B-201ENST00000285176 GRM8O00222 908 aa11.05□□□□□ -0.64
CCDC144B-201ENST00000285176 GNPATO15228 680 aa11.05□□□□□ -0.64
CCDC144B-201ENST00000285176 CCDC57Q2TAC2 916 aa11.05□□□□□ -0.64
CCDC144B-201ENST00000285176 FBXW7Q969H0 707 aa11.05□□□□□ -0.64
CCDC144B-201ENST00000285176 BICC1Q9H694 974 aaKnown RBP11.05□□□□□ -0.64
CCDC144B-201ENST00000285176 AFF2P51816 1311 aa11.05□□□□□ -0.64
CCDC144B-201ENST00000285176 BACH2Q9BYV9 841 aa11.05□□□□□ -0.64
CCDC144B-201ENST00000285176 KIAA1211Q6ZU35 1233 aa11.05□□□□□ -0.64
CCDC144B-201ENST00000285176 USP44Q9H0E7 712 aa11.05□□□□□ -0.64
CCDC144B-201ENST00000285176 RTN4Q9NQC3 1192 aaKnown RBP11.05□□□□□ -0.64
CCDC144B-201ENST00000285176 RTL1A6NKG5 1358 aa11.05□□□□□ -0.64
CCDC144B-201ENST00000285176 FKBP4Q02790 459 aaKnown RBP eCLIP11.05□□□□□ -0.64
CCDC144B-201ENST00000285176 BCL11BQ9C0K0 894 aaPredicted RBP11.05□□□□□ -0.64
CCDC144B-201ENST00000285176 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.05□□□□□ -0.64
CCDC144B-201ENST00000285176 RPAP2Q8IXW5 612 aaPredicted RBP11.04□□□□□ -0.64
CCDC144B-201ENST00000285176 CHMP4CQ96CF2 233 aa11.04□□□□□ -0.64
CCDC144B-201ENST00000285176 COL3A1P02461 1466 aaPredicted RBP11.04□□□□□ -0.64
CCDC144B-201ENST00000285176 PTF1AQ7RTS3 328 aa11.04□□□□□ -0.64
CCDC144B-201ENST00000285176 UNC5CLQ8IV45 518 aa11.04□□□□□ -0.64
CCDC144B-201ENST00000285176 NIP7Q9Y221 180 aaKnown RBP eCLIP11.04□□□□□ -0.64
CCDC144B-201ENST00000285176 SSH2Q76I76 1423 aa11.04□□□□□ -0.64
CCDC144B-201ENST00000285176 DEKP35659 375 aaKnown RBP11.04□□□□□ -0.64
CCDC144B-201ENST00000285176 GCC1Q96CN9 775 aa11.04□□□□□ -0.64
CCDC144B-201ENST00000285176 PXDNQ92626 1479 aa11.04□□□□□ -0.64
CCDC144B-201ENST00000285176 DTNBO60941 627 aa11.03□□□□□ -0.64
CCDC144B-201ENST00000285176 ZPR1O75312 459 aa11.03□□□□□ -0.64
CCDC144B-201ENST00000285176 ARHGAP45Q92619 1136 aa11.03□□□□□ -0.64
CCDC144B-201ENST00000285176 DIAPH3Q9NSV4 1193 aa11.03□□□□□ -0.64
CCDC144B-201ENST00000285176 CWC27Q6UX04 472 aaKnown RBP11.03□□□□□ -0.64
CCDC144B-201ENST00000285176 CCNL1Q9UK58 526 aaPredicted RBP11.03□□□□□ -0.64
CCDC144B-201ENST00000285176 GPATCH3Q96I76 525 aa11.03□□□□□ -0.64
CCDC144B-201ENST00000285176 SUCLG2Q96I99 432 aa11.03□□□□□ -0.64
CCDC144B-201ENST00000285176 NALCNQ8IZF0 1738 aa11.03□□□□□ -0.64
CCDC144B-201ENST00000285176 MEGF6O75095 1541 aa11.03□□□□□ -0.64
CCDC144B-201ENST00000285176 VPS37DQ86XT2 251 aa11.03□□□□□ -0.64
CCDC144B-201ENST00000285176 SEPT12Q8IYM1 358 aa11.03□□□□□ -0.64
CCDC144B-201ENST00000285176 CWC25Q9NXE8 425 aaPredicted RBP11.03□□□□□ -0.64
CCDC144B-201ENST00000285176 JAG2Q9Y219 1238 aa11.03□□□□□ -0.64
CCDC144B-201ENST00000285176 KIF20BQ96Q89 1820 aa11.02□□□□□ -0.64
CCDC144B-201ENST00000285176 MCCP23508 829 aa11.02□□□□□ -0.64
CCDC144B-201ENST00000285176 AK7Q96M32 723 aa11.02□□□□□ -0.64
CCDC144B-201ENST00000285176 LARP6Q9BRS8 491 aaKnown RBP11.02□□□□□ -0.64
CCDC144B-201ENST00000285176 FSD1Q9BTV5 496 aa11.02□□□□□ -0.64
CCDC144B-201ENST00000285176 HDAC5Q9UQL6 1122 aa11.02□□□□□ -0.64
CCDC144B-201ENST00000285176 SIRT2Q8IXJ6 389 aa11.02□□□□□ -0.65
CCDC144B-201ENST00000285176 LINS1Q8NG48 757 aa11.02□□□□□ -0.65
CCDC144B-201ENST00000285176 MPHOSPH8Q99549 860 aa11.02□□□□□ -0.65
CCDC144B-201ENST00000285176 TOMM22Q9NS69 142 aa11.02□□□□□ -0.65
CCDC144B-201ENST00000285176 KDRP35968 1356 aa11.02□□□□□ -0.65
CCDC144B-201ENST00000285176 LOC102724428A0A0B4J2F2 783 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms