RNA–Protein interactions for RNA: ENST00000271620.7

PRUNE1-201, Transcript of prune exopolyphosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRUNE1, Length 2,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-201ENST00000271620 ZC3H6P61129 1189 aaKnown RBP13.21□□□□□ -0.29
PRUNE1-201ENST00000271620 PA2G4Q9UQ80 394 aaKnown RBP13.21□□□□□ -0.29
PRUNE1-201ENST00000271620 SSH3Q8TE77 659 aa13.21□□□□□ -0.29
PRUNE1-201ENST00000271620 BEND3Q5T5X7 828 aa13.2□□□□□ -0.3
PRUNE1-201ENST00000271620 DDX17Q92841 729 aaKnown RBP13.2□□□□□ -0.3
PRUNE1-201ENST00000271620 CYP2E1P05181 493 aaPredicted RBP13.2□□□□□ -0.3
PRUNE1-201ENST00000271620 KLHL40Q2TBA0 621 aa13.2□□□□□ -0.3
PRUNE1-201ENST00000271620 CWC27Q6UX04 472 aaKnown RBP13.2□□□□□ -0.3
PRUNE1-201ENST00000271620 LMBRD1Q9NUN5 540 aa13.2□□□□□ -0.3
PRUNE1-201ENST00000271620 NSFL1CQ9UNZ2 370 aaKnown RBP13.2□□□□□ -0.3
PRUNE1-201ENST00000271620 SPG7Q9UQ90 795 aa13.2□□□□□ -0.3
PRUNE1-201ENST00000271620 ANKARQ7Z5J8 1434 aa13.2□□□□□ -0.3
PRUNE1-201ENST00000271620 FER1L4A9Z1Z3 1794 aa13.2□□□□□ -0.3
PRUNE1-201ENST00000271620 MAP3K2Q9Y2U5 619 aa13.2□□□□□ -0.3
PRUNE1-201ENST00000271620 ERBB4Q15303 1308 aa13.19□□□□□ -0.3
PRUNE1-201ENST00000271620 SLC39A6Q13433 755 aa13.19□□□□□ -0.3
PRUNE1-201ENST00000271620 C1orf141Q5JVX7 400 aa13.19□□□□□ -0.3
PRUNE1-201ENST00000271620 DDX54Q8TDD1 881 aaKnown RBP13.19□□□□□ -0.3
PRUNE1-201ENST00000271620 C9orf78Q9NZ63 289 aaPredicted RBP13.19□□□□□ -0.3
PRUNE1-201ENST00000271620 CEMIPQ8WUJ3 1361 aa13.19□□□□□ -0.3
PRUNE1-201ENST00000271620 CPA1P15085 419 aa13.19□□□□□ -0.3
PRUNE1-201ENST00000271620 PIP4K2AP48426 406 aaPredicted RBP13.19□□□□□ -0.3
PRUNE1-201ENST00000271620 ANKRD24Q8TF21 1146 aa13.19□□□□□ -0.3
PRUNE1-201ENST00000271620 GDPD2Q9HCC8 539 aa13.19□□□□□ -0.3
PRUNE1-201ENST00000271620 MCCP23508 829 aa13.18□□□□□ -0.3
PRUNE1-201ENST00000271620 GPT2Q8TD30 523 aa13.18□□□□□ -0.3
PRUNE1-201ENST00000271620 PI4K2BQ8TCG2 481 aa13.18□□□□□ -0.3
PRUNE1-201ENST00000271620 CWC22Q9HCG8 908 aaKnown RBP13.18□□□□□ -0.3
PRUNE1-201ENST00000271620 STAP2Q9UGK3 403 aa13.18□□□□□ -0.3
PRUNE1-201ENST00000271620 PLEKHO1Q53GL0 409 aaPredicted RBP13.17□□□□□ -0.3
PRUNE1-201ENST00000271620 AKAP4Q5JQC9 854 aa13.17□□□□□ -0.3
PRUNE1-201ENST00000271620 TRIM44Q96DX7 344 aaPredicted RBP13.17□□□□□ -0.3
PRUNE1-201ENST00000271620 XRN1Q8IZH2 1706 aaKnown RBP13.17□□□□□ -0.3
PRUNE1-201ENST00000271620 NASPP49321 788 aaPredicted RBP13.17□□□□□ -0.3
PRUNE1-201ENST00000271620 ZSCAN23Q3MJ62 389 aa13.17□□□□□ -0.3
PRUNE1-201ENST00000271620 KCNH5Q8NCM2 988 aa13.17□□□□□ -0.3
PRUNE1-201ENST00000271620 JARID2Q92833 1246 aaPredicted RBP13.17□□□□□ -0.3
PRUNE1-201ENST00000271620 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.17□□□□□ -0.3
PRUNE1-201ENST00000271620 ADCY9O60503 1353 aa13.17□□□□□ -0.3
PRUNE1-201ENST00000271620 RNMTO43148 476 aaKnown RBP13.17□□□□□ -0.3
PRUNE1-201ENST00000271620 CLEC17AQ6ZS10 378 aa13.17□□□□□ -0.3
PRUNE1-201ENST00000271620 MARF1Q9Y4F3 1742 aaKnown RBP13.17□□□□□ -0.3
PRUNE1-201ENST00000271620 FAM208AQ9UK61 1670 aaKnown RBP13.16□□□□□ -0.3
PRUNE1-201ENST00000271620 MYL6BP14649 208 aa13.16□□□□□ -0.3
PRUNE1-201ENST00000271620 POLA2Q14181 598 aa13.16□□□□□ -0.3
PRUNE1-201ENST00000271620 KIF1BPQ96EK5 621 aa13.16□□□□□ -0.3
PRUNE1-201ENST00000271620 SIL1Q9H173 461 aa13.16□□□□□ -0.3
PRUNE1-201ENST00000271620 PXDNQ92626 1479 aa13.16□□□□□ -0.3
PRUNE1-201ENST00000271620 GIGYF1O75420 1035 aaPredicted RBP13.16□□□□□ -0.3
PRUNE1-201ENST00000271620 ARHGEF25Q86VW2 580 aa13.16□□□□□ -0.3
PRUNE1-201ENST00000271620 RASEFQ8IZ41 740 aa13.16□□□□□ -0.3
PRUNE1-201ENST00000271620 KLHDC4Q8TBB5 520 aa13.16□□□□□ -0.3
PRUNE1-201ENST00000271620 PRIM1P49642 420 aaKnown RBP13.15□□□□□ -0.3
PRUNE1-201ENST00000271620 BABAM1Q9NWV8 329 aa13.15□□□□□ -0.3
PRUNE1-201ENST00000271620 DBF4Q9UBU7 674 aaPredicted RBP13.15□□□□□ -0.3
PRUNE1-201ENST00000271620 LTN1O94822 1766 aa13.15□□□□□ -0.3
PRUNE1-201ENST00000271620 SYCE3A1L190 88 aa13.14□□□□□ -0.31
PRUNE1-201ENST00000271620 CABLES1Q8TDN4 633 aa13.14□□□□□ -0.31
PRUNE1-201ENST00000271620 RGPD2P0DJD1 1756 aa13.14□□□□□ -0.31
PRUNE1-201ENST00000271620 LRRC37A3O60309 1634 aa13.14□□□□□ -0.31
PRUNE1-201ENST00000271620 TMEM63CQ9P1W3 806 aa13.14□□□□□ -0.31
PRUNE1-201ENST00000271620 ESPNB1AK53 854 aa13.14□□□□□ -0.31
PRUNE1-201ENST00000271620 RAB11FIP3O75154 756 aa13.14□□□□□ -0.31
PRUNE1-201ENST00000271620 PTMSP20962 102 aa13.14□□□□□ -0.31
PRUNE1-201ENST00000271620 NLRP2Q9NX02 1062 aa13.14□□□□□ -0.31
PRUNE1-201ENST00000271620 RNF214Q8ND24 703 aa13.13□□□□□ -0.31
PRUNE1-201ENST00000271620 CCDC8Q9H0W5 538 aaPredicted RBP13.13□□□□□ -0.31
PRUNE1-201ENST00000271620 SGSM2O43147 1006 aa13.13□□□□□ -0.31
PRUNE1-201ENST00000271620 HSPA4P34932 840 aa13.13□□□□□ -0.31
PRUNE1-201ENST00000271620 KRT28Q7Z3Y7 464 aa13.13□□□□□ -0.31
PRUNE1-201ENST00000271620 CNTROBQ8N137 903 aa13.13□□□□□ -0.31
PRUNE1-201ENST00000271620 CLASRPQ8N2M8 674 aaKnown RBP13.13□□□□□ -0.31
PRUNE1-201ENST00000271620 NAP1L5Q96NT1 182 aaPredicted RBP13.13□□□□□ -0.31
PRUNE1-201ENST00000271620 RBSNQ9H1K0 784 aa13.13□□□□□ -0.31
PRUNE1-201ENST00000271620 PROSER2Q86WR7 435 aaPredicted RBP13.12□□□□□ -0.31
PRUNE1-201ENST00000271620 NFATC2IPQ8NCF5 419 aa13.12□□□□□ -0.31
PRUNE1-201ENST00000271620 KIAA1211Q6ZU35 1233 aa13.12□□□□□ -0.31
PRUNE1-201ENST00000271620 AACSQ86V21 672 aa13.12□□□□□ -0.31
PRUNE1-201ENST00000271620 ISY1Q9ULR0 285 aaKnown RBP13.12□□□□□ -0.31
PRUNE1-201ENST00000271620 SNX14Q9Y5W7 946 aa13.12□□□□□ -0.31
PRUNE1-201ENST00000271620 NFAT5O94916 1531 aa13.12□□□□□ -0.31
PRUNE1-201ENST00000271620 PTH1RQ03431 593 aa13.11□□□□□ -0.31
PRUNE1-201ENST00000271620 AMOTQ4VCS5 1084 aa13.11□□□□□ -0.31
PRUNE1-201ENST00000271620 KSR2Q6VAB6 950 aa13.11□□□□□ -0.31
PRUNE1-201ENST00000271620 SUCLG2Q96I99 432 aa13.11□□□□□ -0.31
PRUNE1-201ENST00000271620 BICC1Q9H694 974 aaKnown RBP13.11□□□□□ -0.31
PRUNE1-201ENST00000271620 IFIT2P09913 472 aaKnown RBP13.11□□□□□ -0.31
PRUNE1-201ENST00000271620 COL9A3Q14050 684 aaPredicted RBP13.11□□□□□ -0.31
PRUNE1-201ENST00000271620 CHRNA2Q15822 529 aa13.11□□□□□ -0.31
PRUNE1-201ENST00000271620 DIAPH3Q9NSV4 1193 aa13.11□□□□□ -0.31
PRUNE1-201ENST00000271620 TLR7Q9NYK1 1049 aaKnown RBP13.11□□□□□ -0.31
PRUNE1-201ENST00000271620 BRD1O95696 1058 aa13.11□□□□□ -0.31
PRUNE1-201ENST00000271620 CASTP20810 708 aaKnown RBP13.11□□□□□ -0.31
PRUNE1-201ENST00000271620 AK2P54819 239 aa13.11□□□□□ -0.31
PRUNE1-201ENST00000271620 ANAPC15P60006 121 aa13.11□□□□□ -0.31
PRUNE1-201ENST00000271620 ADCK5Q3MIX3 580 aa13.11□□□□□ -0.31
PRUNE1-201ENST00000271620 LSG1Q9H089 658 aaKnown RBP13.11□□□□□ -0.31
PRUNE1-201ENST00000271620 CCDC9Q9Y3X0 531 aaKnown RBP13.11□□□□□ -0.31
PRUNE1-201ENST00000271620 GADD45BO75293 160 aaPredicted RBP13.1□□□□□ -0.31
PRUNE1-201ENST00000271620 CUL4AQ13619 759 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms