RNA–Protein interactions for RNA: ENST00000267101.7

ERBB3-201, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB3, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-201ENST00000267101 CHPF2Q9P2E5 772 aa13.28□□□□□ -0.28
ERBB3-201ENST00000267101 CEP126Q9P2H0 1117 aa13.28□□□□□ -0.28
ERBB3-201ENST00000267101 TMEM94Q12767 1356 aa13.28□□□□□ -0.28
ERBB3-201ENST00000267101 CWC22Q9HCG8 908 aaKnown RBP13.27□□□□□ -0.28
ERBB3-201ENST00000267101 EXOC6BQ9Y2D4 811 aa13.27□□□□□ -0.28
ERBB3-201ENST00000267101 PRPF40AO75400 957 aaKnown RBP13.27□□□□□ -0.29
ERBB3-201ENST00000267101 BTG4Q9NY30 223 aa13.27□□□□□ -0.29
ERBB3-201ENST00000267101 SETBP1Q9Y6X0 1596 aa13.27□□□□□ -0.29
ERBB3-201ENST00000267101 K7ELQ4 463 aaPredicted RBP13.27□□□□□ -0.29
ERBB3-201ENST00000267101 DDB1Q16531 1140 aa13.27□□□□□ -0.29
ERBB3-201ENST00000267101 RNF214Q8ND24 703 aa13.27□□□□□ -0.29
ERBB3-201ENST00000267101 SDF4Q9BRK5 362 aa13.27□□□□□ -0.29
ERBB3-201ENST00000267101 AGLP35573 1532 aa13.27□□□□□ -0.29
ERBB3-201ENST00000267101 ZNF592Q92610 1267 aa13.27□□□□□ -0.29
ERBB3-201ENST00000267101 DCAF5Q96JK2 942 aa13.27□□□□□ -0.29
ERBB3-201ENST00000267101 RAD21O60216 631 aa13.26□□□□□ -0.29
ERBB3-201ENST00000267101 NUTM1Q86Y26 1132 aa13.26□□□□□ -0.29
ERBB3-201ENST00000267101 SLC39A6Q13433 755 aa13.26□□□□□ -0.29
ERBB3-201ENST00000267101 ZSCAN25Q6NSZ9 544 aa13.26□□□□□ -0.29
ERBB3-201ENST00000267101 CCAR2Q8N163 923 aaKnown RBP13.26□□□□□ -0.29
ERBB3-201ENST00000267101 CCDC85AQ96PX6 553 aaPredicted RBP13.26□□□□□ -0.29
ERBB3-201ENST00000267101 ZBTB3Q9H5J0 574 aa13.26□□□□□ -0.29
ERBB3-201ENST00000267101 A0A087WZG4 1122 aa13.25□□□□□ -0.29
ERBB3-201ENST00000267101 IPO7O95373 1038 aaKnown RBP13.25□□□□□ -0.29
ERBB3-201ENST00000267101 CWC25Q9NXE8 425 aaPredicted RBP13.25□□□□□ -0.29
ERBB3-201ENST00000267101 TRMT112Q9UI30 125 aaKnown RBP13.25□□□□□ -0.29
ERBB3-201ENST00000267101 PI4KAP2A4QPH2 592 aa13.25□□□□□ -0.29
ERBB3-201ENST00000267101 SMARCA5O60264 1052 aaPredicted RBP13.25□□□□□ -0.29
ERBB3-201ENST00000267101 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.25□□□□□ -0.29
ERBB3-201ENST00000267101 PI4KAP1Q8N8J0 262 aa13.25□□□□□ -0.29
ERBB3-201ENST00000267101 AKAP2Q9Y2D5 859 aa13.25□□□□□ -0.29
ERBB3-201ENST00000267101 ACSBG1Q96GR2 724 aa13.25□□□□□ -0.29
ERBB3-201ENST00000267101 CYP46A1Q9Y6A2 500 aa13.25□□□□□ -0.29
ERBB3-201ENST00000267101 CEP89Q96ST8 783 aa13.25□□□□□ -0.29
ERBB3-201ENST00000267101 NFATC2IPQ8NCF5 419 aa13.24□□□□□ -0.29
ERBB3-201ENST00000267101 METTL24Q5JXM2 366 aa13.24□□□□□ -0.29
ERBB3-201ENST00000267101 MX1P20591 662 aa13.24□□□□□ -0.29
ERBB3-201ENST00000267101 SART3Q15020 963 aaKnown RBP13.24□□□□□ -0.29
ERBB3-201ENST00000267101 USP6P35125 1406 aa13.24□□□□□ -0.29
ERBB3-201ENST00000267101 SOS1Q07889 1333 aaPredicted RBP13.24□□□□□ -0.29
ERBB3-201ENST00000267101 LETM1O95202 739 aaPredicted RBP13.23□□□□□ -0.29
ERBB3-201ENST00000267101 FKBP4Q02790 459 aaKnown RBP eCLIP13.23□□□□□ -0.29
ERBB3-201ENST00000267101 HOMER1Q86YM7 354 aa13.23□□□□□ -0.29
ERBB3-201ENST00000267101 AATKQ6ZMQ8 1374 aa13.23□□□□□ -0.29
ERBB3-201ENST00000267101 FIBPO43427 364 aa13.23□□□□□ -0.29
ERBB3-201ENST00000267101 CIZ1Q9ULV3 898 aaPredicted RBP13.23□□□□□ -0.29
ERBB3-201ENST00000267101 AK7Q96M32 723 aa13.23□□□□□ -0.29
ERBB3-201ENST00000267101 XBP1P17861 261 aa13.23□□□□□ -0.29
ERBB3-201ENST00000267101 ATP6V1AP38606 617 aa13.23□□□□□ -0.29
ERBB3-201ENST00000267101 IFIT5Q13325 482 aaKnown RBP13.23□□□□□ -0.29
ERBB3-201ENST00000267101 ANKRD13DQ6ZTN6 518 aa13.23□□□□□ -0.29
ERBB3-201ENST00000267101 SMARCC1Q92922 1105 aaPredicted RBP13.23□□□□□ -0.29
ERBB3-201ENST00000267101 VAMP4O75379 141 aa13.23□□□□□ -0.29
ERBB3-201ENST00000267101 CDCA7Q9BWT1 371 aaPredicted RBP13.23□□□□□ -0.29
ERBB3-201ENST00000267101 NAT10Q9H0A0 1025 aaKnown RBP13.23□□□□□ -0.29
ERBB3-201ENST00000267101 BABAM1Q9NWV8 329 aa13.22□□□□□ -0.29
ERBB3-201ENST00000267101 ANXA1P04083 346 aa13.22□□□□□ -0.29
ERBB3-201ENST00000267101 A0A0U1RQG5 324 aaPredicted RBP13.22□□□□□ -0.29
ERBB3-201ENST00000267101 PCMTD1Q96MG8 357 aaPredicted RBP13.22□□□□□ -0.29
ERBB3-201ENST00000267101 ANKARQ7Z5J8 1434 aa13.22□□□□□ -0.29
ERBB3-201ENST00000267101 SLC3A2P08195 630 aaKnown RBP13.22□□□□□ -0.29
ERBB3-201ENST00000267101 ANKRD1Q15327 319 aa13.22□□□□□ -0.29
ERBB3-201ENST00000267101 TSPYL6Q8N831 410 aa13.22□□□□□ -0.29
ERBB3-201ENST00000267101 XAGE3Q8WTP9 111 aa13.22□□□□□ -0.29
ERBB3-201ENST00000267101 PIK3C2BO00750 1634 aa13.22□□□□□ -0.29
ERBB3-201ENST00000267101 ANKRD18BA2A2Z9 1011 aa13.21□□□□□ -0.29
ERBB3-201ENST00000267101 GPTP24298 496 aa13.21□□□□□ -0.29
ERBB3-201ENST00000267101 CCDC39Q9UFE4 941 aa13.21□□□□□ -0.29
ERBB3-201ENST00000267101 WDR33Q9C0J8 1336 aaKnown RBP13.21□□□□□ -0.29
ERBB3-201ENST00000267101 ATP5J2-PTCD1G3V325 749 aa13.21□□□□□ -0.29
ERBB3-201ENST00000267101 KINO60870 393 aaKnown RBP13.21□□□□□ -0.29
ERBB3-201ENST00000267101 BRMS1Q9HCU9 246 aa13.21□□□□□ -0.29
ERBB3-201ENST00000267101 TRIM35Q9UPQ4 493 aa13.21□□□□□ -0.29
ERBB3-201ENST00000267101 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.29
ERBB3-201ENST00000267101 BCORL1Q5H9F3 1711 aa13.21□□□□□ -0.3
ERBB3-201ENST00000267101 PREX1Q8TCU6 1659 aa13.21□□□□□ -0.3
ERBB3-201ENST00000267101 NBPF6Q5VWK0 638 aa13.2□□□□□ -0.3
ERBB3-201ENST00000267101 NBPF4Q96M43 638 aa13.2□□□□□ -0.3
ERBB3-201ENST00000267101 CDC42BPGQ6DT37 1551 aa13.2□□□□□ -0.3
ERBB3-201ENST00000267101 KSR2Q6VAB6 950 aa13.2□□□□□ -0.3
ERBB3-201ENST00000267101 PPP1R42Q7Z4L9 355 aa13.2□□□□□ -0.3
ERBB3-201ENST00000267101 GLRX3O76003 335 aaKnown RBP13.2□□□□□ -0.3
ERBB3-201ENST00000267101 MCM4P33991 863 aa13.2□□□□□ -0.3
ERBB3-201ENST00000267101 CWC27Q6UX04 472 aaKnown RBP13.2□□□□□ -0.3
ERBB3-201ENST00000267101 PRR36Q9H6K5 1346 aa13.2□□□□□ -0.3
ERBB3-201ENST00000267101 COPS6Q7L5N1 327 aa13.2□□□□□ -0.3
ERBB3-201ENST00000267101 TSPY26PQ9H489 355 aa13.2□□□□□ -0.3
ERBB3-201ENST00000267101 PPP1R1BQ9UD71 204 aaPredicted RBP13.2□□□□□ -0.3
ERBB3-201ENST00000267101 FAM13BQ9NYF5 915 aa13.19□□□□□ -0.3
ERBB3-201ENST00000267101 ALDH1L1O75891 902 aa13.19□□□□□ -0.3
ERBB3-201ENST00000267101 SKAP1Q86WV1 359 aa13.19□□□□□ -0.3
ERBB3-201ENST00000267101 SPINK5Q9NQ38 1064 aaPredicted RBP13.19□□□□□ -0.3
ERBB3-201ENST00000267101 OLFM4Q6UX06 510 aa13.19□□□□□ -0.3
ERBB3-201ENST00000267101 NACAP1Q9BZK3 213 aa13.19□□□□□ -0.3
ERBB3-201ENST00000267101 CTDP1Q9Y5B0 961 aaPredicted RBP13.19□□□□□ -0.3
ERBB3-201ENST00000267101 BLOC1S2Q6QNY1 142 aa13.19□□□□□ -0.3
ERBB3-201ENST00000267101 NEXMIFQ5QGS0 1516 aa13.19□□□□□ -0.3
ERBB3-201ENST00000267101 IGHDP01880 384 aa13.18□□□□□ -0.3
ERBB3-201ENST00000267101 HDAC1Q13547 482 aaPredicted RBP13.18□□□□□ -0.3
ERBB3-201ENST00000267101 CCDC70Q6NSX1 233 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms