RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 STK32BQ9NY57 414 aa10.18□□□□□ -0.78
GTF3C3-201ENST00000263956 GNPATO15228 680 aa10.17□□□□□ -0.78
GTF3C3-201ENST00000263956 PIP4K2AP48426 406 aaPredicted RBP10.17□□□□□ -0.78
GTF3C3-201ENST00000263956 IGHMBP2P38935 993 aaKnown RBP10.17□□□□□ -0.78
GTF3C3-201ENST00000263956 SPINK5Q9NQ38 1064 aaPredicted RBP10.17□□□□□ -0.78
GTF3C3-201ENST00000263956 TBC1D2BQ9UPU7 963 aa10.17□□□□□ -0.78
GTF3C3-201ENST00000263956 SETDB2Q96T68 719 aa10.17□□□□□ -0.78
GTF3C3-201ENST00000263956 TRAPPC3LQ5T215 181 aa10.16□□□□□ -0.78
GTF3C3-201ENST00000263956 CCDC87Q9NVE4 849 aa10.16□□□□□ -0.78
GTF3C3-201ENST00000263956 CEP126Q9P2H0 1117 aa10.16□□□□□ -0.78
GTF3C3-201ENST00000263956 ALDH1L1O75891 902 aa10.16□□□□□ -0.78
GTF3C3-201ENST00000263956 DDRGK1Q96HY6 314 aa10.16□□□□□ -0.78
GTF3C3-201ENST00000263956 CCDC85AQ96PX6 553 aaPredicted RBP10.16□□□□□ -0.78
GTF3C3-201ENST00000263956 CPDO75976 1380 aa10.16□□□□□ -0.78
GTF3C3-201ENST00000263956 NBPF5PQ86XG9 351 aaPredicted RBP10.16□□□□□ -0.78
GTF3C3-201ENST00000263956 SIL1Q9H173 461 aa10.16□□□□□ -0.78
GTF3C3-201ENST00000263956 NOL10Q9BSC4 688 aaKnown RBP10.16□□□□□ -0.78
GTF3C3-201ENST00000263956 CYP27B1O15528 508 aa10.15□□□□□ -0.78
GTF3C3-201ENST00000263956 LINS1Q8NG48 757 aa10.15□□□□□ -0.78
GTF3C3-201ENST00000263956 A1BGP04217 495 aa10.15□□□□□ -0.78
GTF3C3-201ENST00000263956 UBE3BQ7Z3V4 1068 aa10.15□□□□□ -0.78
GTF3C3-201ENST00000263956 FBXW7Q969H0 707 aa10.15□□□□□ -0.78
GTF3C3-201ENST00000263956 NIP7Q9Y221 180 aaKnown RBP eCLIP10.15□□□□□ -0.78
GTF3C3-201ENST00000263956 IFIT5Q13325 482 aaKnown RBP10.15□□□□□ -0.79
GTF3C3-201ENST00000263956 FAM182BQ5T319 152 aa10.15□□□□□ -0.79
GTF3C3-201ENST00000263956 FBXO41Q8TF61 875 aa10.15□□□□□ -0.79
GTF3C3-201ENST00000263956 KCNQ3O43525 872 aa10.14□□□□□ -0.79
GTF3C3-201ENST00000263956 GIGYF1O75420 1035 aaPredicted RBP10.14□□□□□ -0.79
GTF3C3-201ENST00000263956 TRIM37O94972 964 aa10.14□□□□□ -0.79
GTF3C3-201ENST00000263956 DIAPH3Q9NSV4 1193 aa10.14□□□□□ -0.79
GTF3C3-201ENST00000263956 IFT172Q9UG01 1749 aa10.14□□□□□ -0.79
GTF3C3-201ENST00000263956 LOC102724428A0A0B4J2F2 783 aa10.14□□□□□ -0.79
GTF3C3-201ENST00000263956 SIK1P57059 783 aa10.14□□□□□ -0.79
GTF3C3-201ENST00000263956 RUFY2Q8WXA3 655 aa10.14□□□□□ -0.79
GTF3C3-201ENST00000263956 GNL3LQ9NVN8 582 aaKnown RBP10.14□□□□□ -0.79
GTF3C3-201ENST00000263956 C20orf194Q5TEA3 1177 aa10.14□□□□□ -0.79
GTF3C3-201ENST00000263956 RPGRQ92834 1020 aaKnown RBP10.14□□□□□ -0.79
GTF3C3-201ENST00000263956 LRRCC1Q9C099 1032 aa10.14□□□□□ -0.79
GTF3C3-201ENST00000263956 ASAP1Q9ULH1 1129 aa10.14□□□□□ -0.79
GTF3C3-201ENST00000263956 LRRFIP2Q9Y608 721 aaKnown RBP10.14□□□□□ -0.79
GTF3C3-201ENST00000263956 SPATA31A1Q5TZJ5 1347 aa10.14□□□□□ -0.79
GTF3C3-201ENST00000263956 SSH2Q76I76 1423 aa10.14□□□□□ -0.79
GTF3C3-201ENST00000263956 ST5P78524 1137 aa10.13□□□□□ -0.79
GTF3C3-201ENST00000263956 ITSN1Q15811 1721 aa10.13□□□□□ -0.79
GTF3C3-201ENST00000263956 ANKRD18BA2A2Z9 1011 aa10.13□□□□□ -0.79
GTF3C3-201ENST00000263956 CCDC158Q5M9N0 1113 aa10.13□□□□□ -0.79
GTF3C3-201ENST00000263956 NYXQ9GZU5 481 aa10.13□□□□□ -0.79
GTF3C3-201ENST00000263956 PHAXQ9H814 394 aaKnown RBP10.13□□□□□ -0.79
GTF3C3-201ENST00000263956 CD163L1Q9NR16 1453 aa10.13□□□□□ -0.79
GTF3C3-201ENST00000263956 TPTE2Q6XPS3 522 aa10.13□□□□□ -0.79
GTF3C3-201ENST00000263956 PLBD2Q8NHP8 589 aa10.13□□□□□ -0.79
GTF3C3-201ENST00000263956 ERBB4Q15303 1308 aa10.13□□□□□ -0.79
GTF3C3-201ENST00000263956 UTP14AQ9BVJ6 771 aaKnown RBP10.13□□□□□ -0.79
GTF3C3-201ENST00000263956 NAP1L2Q9ULW6 460 aaPredicted RBP10.13□□□□□ -0.79
GTF3C3-201ENST00000263956 ZNF142P52746 1687 aaPredicted RBP10.13□□□□□ -0.79
GTF3C3-201ENST00000263956 NCAPD2Q15021 1401 aa10.12□□□□□ -0.79
GTF3C3-201ENST00000263956 GRM8O00222 908 aa10.12□□□□□ -0.79
GTF3C3-201ENST00000263956 BARGINQ6ZT62 677 aa10.12□□□□□ -0.79
GTF3C3-201ENST00000263956 PIGBQ92521 554 aa10.12□□□□□ -0.79
GTF3C3-201ENST00000263956 CDC5LQ99459 802 aaKnown RBP10.12□□□□□ -0.79
GTF3C3-201ENST00000263956 USP16Q9Y5T5 823 aa10.12□□□□□ -0.79
GTF3C3-201ENST00000263956 SPATA31A5Q5VU36 1347 aa10.12□□□□□ -0.79
GTF3C3-201ENST00000263956 SPATA31A7Q8IWB4 1347 aa10.12□□□□□ -0.79
GTF3C3-201ENST00000263956 OVOS2A0A0G2JMS6 1433 aa10.12□□□□□ -0.79
GTF3C3-201ENST00000263956 USP32Q8NFA0 1604 aa10.12□□□□□ -0.79
GTF3C3-201ENST00000263956 METTL24Q5JXM2 366 aa10.12□□□□□ -0.79
GTF3C3-201ENST00000263956 DDX46Q7L014 1031 aaKnown RBP10.12□□□□□ -0.79
GTF3C3-201ENST00000263956 NLRP3Q96P20 1036 aa10.11□□□□□ -0.79
GTF3C3-201ENST00000263956 PDZRN3Q9UPQ7 1066 aa10.11□□□□□ -0.79
GTF3C3-201ENST00000263956 POLD1P28340 1107 aa10.11□□□□□ -0.79
GTF3C3-201ENST00000263956 MFAP1P55081 439 aaKnown RBP10.11□□□□□ -0.79
GTF3C3-201ENST00000263956 FLAD1Q8NFF5 587 aa10.11□□□□□ -0.79
GTF3C3-201ENST00000263956 PARP3Q9Y6F1 533 aa10.11□□□□□ -0.79
GTF3C3-201ENST00000263956 RAB11FIP3O75154 756 aa10.11□□□□□ -0.79
GTF3C3-201ENST00000263956 PARP10Q53GL7 1025 aa10.11□□□□□ -0.79
GTF3C3-201ENST00000263956 G2E3Q7L622 706 aa10.11□□□□□ -0.79
GTF3C3-201ENST00000263956 KIF1AQ12756 1690 aa10.1□□□□□ -0.79
GTF3C3-201ENST00000263956 CCDC152Q4G0S7 254 aa10.1□□□□□ -0.79
GTF3C3-201ENST00000263956 TTC39AQ5SRH9 613 aa10.1□□□□□ -0.79
GTF3C3-201ENST00000263956 KIF1BPQ96EK5 621 aa10.1□□□□□ -0.79
GTF3C3-201ENST00000263956 AKAP2Q9Y2D5 859 aa10.1□□□□□ -0.79
GTF3C3-201ENST00000263956 ADGRB2O60241 1585 aa10.1□□□□□ -0.79
GTF3C3-201ENST00000263956 JARID2Q92833 1246 aaPredicted RBP10.1□□□□□ -0.79
GTF3C3-201ENST00000263956 EXOC6BQ9Y2D4 811 aa10.1□□□□□ -0.79
GTF3C3-201ENST00000263956 METTL22Q9BUU2 404 aaPredicted RBP10.1□□□□□ -0.79
GTF3C3-201ENST00000263956 POLR1AO95602 1720 aaPredicted RBP10.1□□□□□ -0.79
GTF3C3-201ENST00000263956 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.1□□□□□ -0.79
GTF3C3-201ENST00000263956 AACSQ86V21 672 aa10.1□□□□□ -0.79
GTF3C3-201ENST00000263956 MEIS3Q99687 375 aa10.1□□□□□ -0.79
GTF3C3-201ENST00000263956 IFIT1P09914 478 aaKnown RBP10.09□□□□□ -0.79
GTF3C3-201ENST00000263956 ZNF853P0CG23 659 aa10.09□□□□□ -0.79
GTF3C3-201ENST00000263956 LDHAL6AQ6ZMR3 332 aa10.09□□□□□ -0.79
GTF3C3-201ENST00000263956 KNDC1Q76NI1 1749 aa10.09□□□□□ -0.79
GTF3C3-201ENST00000263956 AMOTL1Q8IY63 956 aa10.09□□□□□ -0.79
GTF3C3-201ENST00000263956 NRXN3Q9Y4C0 1643 aa10.09□□□□□ -0.79
GTF3C3-201ENST00000263956 CWF19L2Q2TBE0 894 aaKnown RBP10.09□□□□□ -0.79
GTF3C3-201ENST00000263956 VSIG10Q8N0Z9 540 aa10.09□□□□□ -0.79
GTF3C3-201ENST00000263956 CNTROBQ8N137 903 aa10.09□□□□□ -0.79
GTF3C3-201ENST00000263956 IL1RAPL2Q9NP60 686 aa10.09□□□□□ -0.79
GTF3C3-201ENST00000263956 FAM161AQ3B820 660 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms