RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 STK3Q13188 491 aa11.14□□□□□ -0.63
CKAP2-201ENST00000258607 MCTP1Q6DN14 999 aa11.14□□□□□ -0.63
CKAP2-201ENST00000258607 PALD1Q9ULE6 856 aa11.14□□□□□ -0.63
CKAP2-201ENST00000258607 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.14□□□□□ -0.63
CKAP2-201ENST00000258607 PIK3R4Q99570 1358 aa11.14□□□□□ -0.63
CKAP2-201ENST00000258607 INTS3Q68E01 1043 aaKnown RBP11.13□□□□□ -0.63
CKAP2-201ENST00000258607 BTG4Q9NY30 223 aa11.13□□□□□ -0.63
CKAP2-201ENST00000258607 TLR7Q9NYK1 1049 aaKnown RBP11.13□□□□□ -0.63
CKAP2-201ENST00000258607 AGLP35573 1532 aa11.13□□□□□ -0.63
CKAP2-201ENST00000258607 BICDL1Q6ZP65 573 aa11.13□□□□□ -0.63
CKAP2-201ENST00000258607 BICC1Q9H694 974 aaKnown RBP11.13□□□□□ -0.63
CKAP2-201ENST00000258607 CDC42BPGQ6DT37 1551 aa11.13□□□□□ -0.63
CKAP2-201ENST00000258607 A0A087WZG4 1122 aa11.13□□□□□ -0.63
CKAP2-201ENST00000258607 NEXNQ0ZGT2 675 aa11.13□□□□□ -0.63
CKAP2-201ENST00000258607 RPAP2Q8IXW5 612 aaPredicted RBP11.13□□□□□ -0.63
CKAP2-201ENST00000258607 NPHP4O75161 1426 aaPredicted RBP11.12□□□□□ -0.63
CKAP2-201ENST00000258607 CYP27B1O15528 508 aa11.12□□□□□ -0.63
CKAP2-201ENST00000258607 BMP2KLQ5H9B9 411 aa11.12□□□□□ -0.63
CKAP2-201ENST00000258607 ZNF790Q6PG37 636 aa11.12□□□□□ -0.63
CKAP2-201ENST00000258607 TTLL7Q6ZT98 887 aa11.12□□□□□ -0.63
CKAP2-201ENST00000258607 RAB11FIP4Q86YS3 637 aa11.12□□□□□ -0.63
CKAP2-201ENST00000258607 NRXN3Q9Y4C0 1643 aa11.12□□□□□ -0.63
CKAP2-201ENST00000258607 AKAP4Q5JQC9 854 aa11.12□□□□□ -0.63
CKAP2-201ENST00000258607 LRRC2Q9BYS8 371 aa11.12□□□□□ -0.63
CKAP2-201ENST00000258607 G3BP1Q13283 466 aaKnown RBP eCLIP11.11□□□□□ -0.63
CKAP2-201ENST00000258607 ARHGAP45Q92619 1136 aa11.11□□□□□ -0.63
CKAP2-201ENST00000258607 PANK2Q9BZ23 570 aa11.11□□□□□ -0.63
CKAP2-201ENST00000258607 DIAPH3Q9NSV4 1193 aa11.11□□□□□ -0.63
CKAP2-201ENST00000258607 SLAIN2Q9P270 581 aa11.11□□□□□ -0.63
CKAP2-201ENST00000258607 DBF4Q9UBU7 674 aaPredicted RBP11.11□□□□□ -0.63
CKAP2-201ENST00000258607 TBC1D2BQ9UPU7 963 aa11.11□□□□□ -0.63
CKAP2-201ENST00000258607 GIGYF1O75420 1035 aaPredicted RBP11.11□□□□□ -0.63
CKAP2-201ENST00000258607 FGD1P98174 961 aa11.11□□□□□ -0.63
CKAP2-201ENST00000258607 DIP2AQ14689 1571 aa11.11□□□□□ -0.63
CKAP2-201ENST00000258607 KIAA1211Q6ZU35 1233 aa11.11□□□□□ -0.63
CKAP2-201ENST00000258607 CADPS2Q86UW7 1296 aa11.11□□□□□ -0.63
CKAP2-201ENST00000258607 RHPN1Q8TCX5 695 aa11.11□□□□□ -0.63
CKAP2-201ENST00000258607 SUCLG2Q96I99 432 aa11.11□□□□□ -0.63
CKAP2-201ENST00000258607 TAF7LQ5H9L4 462 aa11.11□□□□□ -0.63
CKAP2-201ENST00000258607 MED14O60244 1454 aa11.11□□□□□ -0.63
CKAP2-201ENST00000258607 ERBB3P21860 1342 aa11.11□□□□□ -0.63
CKAP2-201ENST00000258607 SNAP23O00161 211 aa11.1□□□□□ -0.63
CKAP2-201ENST00000258607 CLASRPQ8N2M8 674 aaKnown RBP11.1□□□□□ -0.63
CKAP2-201ENST00000258607 SIRT1Q96EB6 747 aa11.1□□□□□ -0.63
CKAP2-201ENST00000258607 EPHA10Q5JZY3 1008 aa11.1□□□□□ -0.63
CKAP2-201ENST00000258607 DDX46Q7L014 1031 aaKnown RBP11.1□□□□□ -0.63
CKAP2-201ENST00000258607 HELBQ8NG08 1087 aaPredicted RBP11.1□□□□□ -0.63
CKAP2-201ENST00000258607 PTPRCP08575 1304 aa11.1□□□□□ -0.63
CKAP2-201ENST00000258607 GORABQ5T7V8 394 aa11.1□□□□□ -0.63
CKAP2-201ENST00000258607 BRINP3Q76B58 766 aa11.1□□□□□ -0.63
CKAP2-201ENST00000258607 FSD1Q9BTV5 496 aa11.1□□□□□ -0.63
CKAP2-201ENST00000258607 IQSEC3Q9UPP2 1182 aaPredicted RBP11.1□□□□□ -0.63
CKAP2-201ENST00000258607 NPHP1O15259 732 aa11.09□□□□□ -0.63
CKAP2-201ENST00000258607 TIMM10P62072 90 aa11.09□□□□□ -0.63
CKAP2-201ENST00000258607 CCDC129Q6ZRS4 1044 aa11.09□□□□□ -0.63
CKAP2-201ENST00000258607 FAM89AQ96GI7 184 aa11.09□□□□□ -0.63
CKAP2-201ENST00000258607 ASAP1Q9ULH1 1129 aa11.09□□□□□ -0.63
CKAP2-201ENST00000258607 CRB1P82279 1406 aa11.09□□□□□ -0.63
CKAP2-201ENST00000258607 UBR1Q8IWV7 1749 aa11.09□□□□□ -0.63
CKAP2-201ENST00000258607 IFNL2Q8IZJ0 200 aa11.09□□□□□ -0.63
CKAP2-201ENST00000258607 RNF214Q8ND24 703 aa11.09□□□□□ -0.63
CKAP2-201ENST00000258607 TNPO1Q92973 898 aaKnown RBP11.09□□□□□ -0.63
CKAP2-201ENST00000258607 DNAJC5Q9H3Z4 198 aa11.09□□□□□ -0.63
CKAP2-201ENST00000258607 FERMT3Q86UX7 667 aa11.08□□□□□ -0.64
CKAP2-201ENST00000258607 TRAK2O60296 914 aa11.08□□□□□ -0.64
CKAP2-201ENST00000258607 FKBP4Q02790 459 aaKnown RBP eCLIP11.08□□□□□ -0.64
CKAP2-201ENST00000258607 PRPF40BQ6NWY9 871 aaKnown RBP11.08□□□□□ -0.64
CKAP2-201ENST00000258607 LMBR1LQ6UX01 489 aa11.08□□□□□ -0.64
CKAP2-201ENST00000258607 ANKRD13DQ6ZTN6 518 aa11.08□□□□□ -0.64
CKAP2-201ENST00000258607 FAM227BQ96M60 508 aa11.08□□□□□ -0.64
CKAP2-201ENST00000258607 DDX49Q9Y6V7 483 aaKnown RBP11.08□□□□□ -0.64
CKAP2-201ENST00000258607 C3P01024 1663 aa11.08□□□□□ -0.64
CKAP2-201ENST00000258607 ARHGEF10O15013 1369 aa11.08□□□□□ -0.64
CKAP2-201ENST00000258607 NPHP3Q7Z494 1330 aa11.08□□□□□ -0.64
CKAP2-201ENST00000258607 ERC2O15083 957 aa11.08□□□□□ -0.64
CKAP2-201ENST00000258607 ATP8B2P98198 1209 aa11.08□□□□□ -0.64
CKAP2-201ENST00000258607 SLC4A8Q2Y0W8 1093 aa11.08□□□□□ -0.64
CKAP2-201ENST00000258607 CHST3Q7LGC8 479 aa11.08□□□□□ -0.64
CKAP2-201ENST00000258607 CHMP5Q9NZZ3 219 aa11.08□□□□□ -0.64
CKAP2-201ENST00000258607 PXDNQ92626 1479 aa11.07□□□□□ -0.64
CKAP2-201ENST00000258607 K7ELQ4 463 aaPredicted RBP11.07□□□□□ -0.64
CKAP2-201ENST00000258607 PRPF40AO75400 957 aaKnown RBP11.07□□□□□ -0.64
CKAP2-201ENST00000258607 RBM27Q9P2N5 1060 aaKnown RBP11.07□□□□□ -0.64
CKAP2-201ENST00000258607 FER1L4A9Z1Z3 1794 aa11.07□□□□□ -0.64
CKAP2-201ENST00000258607 DDX58O95786 925 aaKnown RBP11.07□□□□□ -0.64
CKAP2-201ENST00000258607 NECAB1Q8N987 351 aa11.07□□□□□ -0.64
CKAP2-201ENST00000258607 ZCRB1Q8TBF4 217 aaKnown RBP11.07□□□□□ -0.64
CKAP2-201ENST00000258607 SEC62Q99442 399 aaKnown RBP11.07□□□□□ -0.64
CKAP2-201ENST00000258607 AK9Q5TCS8 1911 aa11.07□□□□□ -0.64
CKAP2-201ENST00000258607 KIF20BQ96Q89 1820 aa11.07□□□□□ -0.64
CKAP2-201ENST00000258607 PHKG2P15735 406 aa11.07□□□□□ -0.64
CKAP2-201ENST00000258607 COL9A3Q14050 684 aaPredicted RBP11.07□□□□□ -0.64
CKAP2-201ENST00000258607 GRM8O00222 908 aa11.06□□□□□ -0.64
CKAP2-201ENST00000258607 MCM4P33991 863 aa11.06□□□□□ -0.64
CKAP2-201ENST00000258607 AMOTQ4VCS5 1084 aa11.06□□□□□ -0.64
CKAP2-201ENST00000258607 BEND3Q5T5X7 828 aa11.06□□□□□ -0.64
CKAP2-201ENST00000258607 CEBPZQ03701 1054 aaKnown RBP11.06□□□□□ -0.64
CKAP2-201ENST00000258607 CAVIN1Q6NZI2 390 aaKnown RBP11.06□□□□□ -0.64
CKAP2-201ENST00000258607 DNAJC10Q8IXB1 793 aa11.06□□□□□ -0.64
CKAP2-201ENST00000258607 FBXW7Q969H0 707 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms