RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 CTNNA3Q9UI47 895 aa13.75□□□□□ -0.21
TROAP-201ENST00000257909 LIMCH1Q9UPQ0 1083 aa13.75□□□□□ -0.21
TROAP-201ENST00000257909 PAXBP1Q9Y5B6 917 aa13.75□□□□□ -0.21
TROAP-201ENST00000257909 TTC14Q96N46 770 aa13.74□□□□□ -0.21
TROAP-201ENST00000257909 SLC4A10Q6U841 1118 aa13.73□□□□□ -0.21
TROAP-201ENST00000257909 AEBP1Q8IUX7 1158 aa13.73□□□□□ -0.21
TROAP-201ENST00000257909 DDX41Q9UJV9 622 aaKnown RBP13.73□□□□□ -0.21
TROAP-201ENST00000257909 RAD50Q92878 1312 aa13.73□□□□□ -0.21
TROAP-201ENST00000257909 PTGS1P23219 599 aa13.73□□□□□ -0.21
TROAP-201ENST00000257909 TPRNQ4KMQ1 711 aa13.73□□□□□ -0.21
TROAP-201ENST00000257909 GNAI3P08754 354 aa13.72□□□□□ -0.21
TROAP-201ENST00000257909 AK2P54819 239 aa13.72□□□□□ -0.21
TROAP-201ENST00000257909 RTF1Q92541 710 aaKnown RBP13.72□□□□□ -0.21
TROAP-201ENST00000257909 ATP8B2P98198 1209 aa13.72□□□□□ -0.21
TROAP-201ENST00000257909 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.72□□□□□ -0.21
TROAP-201ENST00000257909 SNX14Q9Y5W7 946 aa13.72□□□□□ -0.21
TROAP-201ENST00000257909 MORC2Q9Y6X9 1032 aaPredicted RBP13.72□□□□□ -0.21
TROAP-201ENST00000257909 ARHGEF10O15013 1369 aa13.72□□□□□ -0.21
TROAP-201ENST00000257909 NPM1P06748 294 aaKnown RBP eCLIP13.71□□□□□ -0.21
TROAP-201ENST00000257909 BBXQ8WY36 941 aaPredicted RBP13.71□□□□□ -0.21
TROAP-201ENST00000257909 COG3Q96JB2 828 aa13.71□□□□□ -0.21
TROAP-201ENST00000257909 TNNT1P13805 278 aa13.71□□□□□ -0.21
TROAP-201ENST00000257909 DNM1Q05193 864 aaKnown RBP13.71□□□□□ -0.21
TROAP-201ENST00000257909 MAP3K11Q16584 847 aa13.71□□□□□ -0.21
TROAP-201ENST00000257909 FBXO31Q5XUX0 539 aaPredicted RBP13.71□□□□□ -0.21
TROAP-201ENST00000257909 UNC5CLQ8IV45 518 aa13.71□□□□□ -0.21
TROAP-201ENST00000257909 CCDC112Q8NEF3 446 aa13.71□□□□□ -0.21
TROAP-201ENST00000257909 MON2Q7Z3U7 1717 aa13.7□□□□□ -0.22
TROAP-201ENST00000257909 IGSF3O75054 1194 aa13.7□□□□□ -0.22
TROAP-201ENST00000257909 RUFY3Q7L099 469 aa13.7□□□□□ -0.22
TROAP-201ENST00000257909 NME9Q86XW9 330 aa13.7□□□□□ -0.22
TROAP-201ENST00000257909 DLC1Q96QB1 1528 aa13.7□□□□□ -0.22
TROAP-201ENST00000257909 SGSM2O43147 1006 aa13.7□□□□□ -0.22
TROAP-201ENST00000257909 CCDC186Q7Z3E2 898 aa13.7□□□□□ -0.22
TROAP-201ENST00000257909 C16orf45Q96MC5 204 aaPredicted RBP13.7□□□□□ -0.22
TROAP-201ENST00000257909 NUP62CLQ9H1M0 184 aa13.7□□□□□ -0.22
TROAP-201ENST00000257909 MTMR6Q9Y217 621 aa13.7□□□□□ -0.22
TROAP-201ENST00000257909 F6X3S4 739 aa13.69□□□□□ -0.22
TROAP-201ENST00000257909 MCM10Q7L590 875 aa13.69□□□□□ -0.22
TROAP-201ENST00000257909 ZSCAN31Q96LW9 406 aaPredicted RBP13.69□□□□□ -0.22
TROAP-201ENST00000257909 IL25Q9H293 177 aa13.69□□□□□ -0.22
TROAP-201ENST00000257909 ZRANB1Q9UGI0 708 aa13.69□□□□□ -0.22
TROAP-201ENST00000257909 NRKQ7Z2Y5 1582 aa13.69□□□□□ -0.22
TROAP-201ENST00000257909 PNMA6EA0A0J9YXQ4 647 aa13.69□□□□□ -0.22
TROAP-201ENST00000257909 CCDC66A2RUB6 948 aa13.69□□□□□ -0.22
TROAP-201ENST00000257909 SLFN14P0C7P3 912 aa13.69□□□□□ -0.22
TROAP-201ENST00000257909 GJB2P29033 226 aa13.69□□□□□ -0.22
TROAP-201ENST00000257909 TYRO3Q06418 890 aa13.69□□□□□ -0.22
TROAP-201ENST00000257909 WAPLQ7Z5K2 1190 aa13.69□□□□□ -0.22
TROAP-201ENST00000257909 DRC7Q8IY82 874 aa13.69□□□□□ -0.22
TROAP-201ENST00000257909 SH2B1Q9NRF2 756 aaPredicted RBP13.69□□□□□ -0.22
TROAP-201ENST00000257909 MRVI1Q9Y6F6 885 aa13.69□□□□□ -0.22
TROAP-201ENST00000257909 NRXN3Q9Y4C0 1643 aa13.69□□□□□ -0.22
TROAP-201ENST00000257909 RRS1Q15050 365 aaKnown RBP13.68□□□□□ -0.22
TROAP-201ENST00000257909 G2E3Q7L622 706 aa13.68□□□□□ -0.22
TROAP-201ENST00000257909 KIF18AQ8NI77 898 aa13.68□□□□□ -0.22
TROAP-201ENST00000257909 ELP1O95163 1332 aa13.68□□□□□ -0.22
TROAP-201ENST00000257909 CPS1P31327 1500 aa13.68□□□□□ -0.22
TROAP-201ENST00000257909 GTF2E1P29083 439 aaPredicted RBP13.68□□□□□ -0.22
TROAP-201ENST00000257909 SULT6B1Q6IMI4 303 aa13.68□□□□□ -0.22
TROAP-201ENST00000257909 ZSCAN25Q6NSZ9 544 aa13.68□□□□□ -0.22
TROAP-201ENST00000257909 LSG1Q9H089 658 aaKnown RBP13.68□□□□□ -0.22
TROAP-201ENST00000257909 NAP1L2Q9ULW6 460 aaPredicted RBP13.68□□□□□ -0.22
TROAP-201ENST00000257909 AKAP12Q02952 1782 aa13.68□□□□□ -0.22
TROAP-201ENST00000257909 CRB1P82279 1406 aa13.68□□□□□ -0.22
TROAP-201ENST00000257909 FAM193AP78312 1265 aa13.67□□□□□ -0.22
TROAP-201ENST00000257909 KRT85P78386 507 aa13.67□□□□□ -0.22
TROAP-201ENST00000257909 LUZP1Q86V48 1076 aa13.67□□□□□ -0.22
TROAP-201ENST00000257909 PLA2G4DQ86XP0 818 aa13.67□□□□□ -0.22
TROAP-201ENST00000257909 KRT222Q8N1A0 295 aa13.67□□□□□ -0.22
TROAP-201ENST00000257909 CCDC171Q6TFL3 1326 aa13.67□□□□□ -0.22
TROAP-201ENST00000257909 C3P01024 1663 aa13.67□□□□□ -0.22
TROAP-201ENST00000257909 ZNF75DP51815 510 aa13.67□□□□□ -0.22
TROAP-201ENST00000257909 VPS53Q5VIR6 699 aa13.67□□□□□ -0.22
TROAP-201ENST00000257909 STK31Q9BXU1 1019 aa13.67□□□□□ -0.22
TROAP-201ENST00000257909 TRIM5Q9C035 493 aa13.67□□□□□ -0.22
TROAP-201ENST00000257909 HYPKQ9NX55 129 aa13.67□□□□□ -0.22
TROAP-201ENST00000257909 RAB11FIP3O75154 756 aa13.66□□□□□ -0.22
TROAP-201ENST00000257909 LRMPQ12912 555 aa13.66□□□□□ -0.22
TROAP-201ENST00000257909 TERF2Q15554 542 aa13.66□□□□□ -0.22
TROAP-201ENST00000257909 TPD52L1Q16890 204 aaPredicted RBP13.66□□□□□ -0.22
TROAP-201ENST00000257909 ZNF397Q8NF99 534 aaPredicted RBP13.66□□□□□ -0.22
TROAP-201ENST00000257909 TMEM51Q9NW97 253 aa13.66□□□□□ -0.22
TROAP-201ENST00000257909 CASTP20810 708 aaKnown RBP13.66□□□□□ -0.22
TROAP-201ENST00000257909 CCDC83Q8IWF9 413 aa13.66□□□□□ -0.22
TROAP-201ENST00000257909 RASEFQ8IZ41 740 aa13.66□□□□□ -0.22
TROAP-201ENST00000257909 CNTROBQ8N137 903 aa13.66□□□□□ -0.22
TROAP-201ENST00000257909 TDRD7Q8NHU6 1098 aaKnown RBP13.66□□□□□ -0.22
TROAP-201ENST00000257909 TNMDQ9H2S6 317 aa13.66□□□□□ -0.22
TROAP-201ENST00000257909 CBX8Q9HC52 389 aa13.66□□□□□ -0.22
TROAP-201ENST00000257909 CDC25BP30305 580 aa13.65□□□□□ -0.22
TROAP-201ENST00000257909 CEP135Q66GS9 1140 aa13.65□□□□□ -0.22
TROAP-201ENST00000257909 SOS1Q07889 1333 aaPredicted RBP13.65□□□□□ -0.22
TROAP-201ENST00000257909 VPS37CA5D8V6 355 aaPredicted RBP13.65□□□□□ -0.22
TROAP-201ENST00000257909 CAVIN2O95810 425 aa13.65□□□□□ -0.22
TROAP-201ENST00000257909 EIF4A2Q14240 407 aaKnown RBP13.65□□□□□ -0.22
TROAP-201ENST00000257909 ITSN1Q15811 1721 aa13.65□□□□□ -0.22
TROAP-201ENST00000257909 ANO6Q4KMQ2 910 aa13.65□□□□□ -0.22
TROAP-201ENST00000257909 CREBRFQ8IUR6 639 aa13.65□□□□□ -0.22
TROAP-201ENST00000257909 TM6SF1Q9BZW5 370 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms