RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 CCDC196A0A1B0GTZ2 297 aa15.98■□□□□ 0.15
PRPF38A-201ENST00000257181 DDX11L8A8MPP1 907 aa15.98■□□□□ 0.15
PRPF38A-201ENST00000257181 ALDH1B1P30837 517 aa15.98■□□□□ 0.15
PRPF38A-201ENST00000257181 TMEM132AQ24JP5 1023 aa15.98■□□□□ 0.15
PRPF38A-201ENST00000257181 NOB1Q9ULX3 412 aaKnown RBP15.98■□□□□ 0.15
PRPF38A-201ENST00000257181 QTRT2Q9H974 415 aaKnown RBP15.98■□□□□ 0.15
PRPF38A-201ENST00000257181 APBA3O96018 575 aa15.97■□□□□ 0.15
PRPF38A-201ENST00000257181 PPP4R3AQ6IN85 833 aa15.97■□□□□ 0.15
PRPF38A-201ENST00000257181 SMC3Q9UQE7 1217 aa15.97■□□□□ 0.15
PRPF38A-201ENST00000257181 HOXC9P31274 260 aa15.97■□□□□ 0.15
PRPF38A-201ENST00000257181 IMMTQ16891 758 aaKnown RBP15.97■□□□□ 0.15
PRPF38A-201ENST00000257181 CLEC11AQ9Y240 323 aa15.97■□□□□ 0.15
PRPF38A-201ENST00000257181 NPC1L1Q9UHC9 1359 aa15.97■□□□□ 0.15
PRPF38A-201ENST00000257181 TMC4Q7Z404 712 aa15.96■□□□□ 0.15
PRPF38A-201ENST00000257181 GLRX3O76003 335 aaKnown RBP15.96■□□□□ 0.15
PRPF38A-201ENST00000257181 AACSQ86V21 672 aa15.96■□□□□ 0.15
PRPF38A-201ENST00000257181 CRBNQ96SW2 442 aa15.96■□□□□ 0.15
PRPF38A-201ENST00000257181 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.96■□□□□ 0.151e-7■■■□□ 18.3
PRPF38A-201ENST00000257181 AGLP35573 1532 aa15.96■□□□□ 0.15
PRPF38A-201ENST00000257181 H0YIN7 160 aa15.96■□□□□ 0.15
PRPF38A-201ENST00000257181 MCTP1Q6DN14 999 aa15.96■□□□□ 0.15
PRPF38A-201ENST00000257181 DZIP3Q86Y13 1208 aaKnown RBP15.96■□□□□ 0.15
PRPF38A-201ENST00000257181 DNTTIP2Q5QJE6 756 aaKnown RBP15.96■□□□□ 0.14
PRPF38A-201ENST00000257181 USHBP1Q8N6Y0 703 aa15.96■□□□□ 0.14
PRPF38A-201ENST00000257181 GRIPAP1Q4V328 841 aa15.95■□□□□ 0.14
PRPF38A-201ENST00000257181 ANKRD13DQ6ZTN6 518 aa15.95■□□□□ 0.14
PRPF38A-201ENST00000257181 CCDC12Q8WUD4 166 aaPredicted RBP15.95■□□□□ 0.14
PRPF38A-201ENST00000257181 ZNF396Q96N95 335 aaPredicted RBP15.95■□□□□ 0.14
PRPF38A-201ENST00000257181 HMGB1P09429 215 aaKnown RBP15.95■□□□□ 0.14
PRPF38A-201ENST00000257181 SH2D4AQ9H788 454 aa15.95■□□□□ 0.14
PRPF38A-201ENST00000257181 SEC63Q9UGP8 760 aaKnown RBP15.95■□□□□ 0.14
PRPF38A-201ENST00000257181 SYNMO15061 1565 aa15.94■□□□□ 0.14
PRPF38A-201ENST00000257181 ATP2B2Q01814 1243 aa15.94■□□□□ 0.14
PRPF38A-201ENST00000257181 TTC37Q6PGP7 1564 aa15.94■□□□□ 0.14
PRPF38A-201ENST00000257181 ZNF444Q8N0Y2 327 aaPredicted RBP15.94■□□□□ 0.14
PRPF38A-201ENST00000257181 NUCB2P80303 420 aa15.94■□□□□ 0.14
PRPF38A-201ENST00000257181 JCADQ9P266 1359 aa15.94■□□□□ 0.14
PRPF38A-201ENST00000257181 CNBD1Q8NA66 436 aa15.94■□□□□ 0.14
PRPF38A-201ENST00000257181 ARHGAP45Q92619 1136 aa15.94■□□□□ 0.14
PRPF38A-201ENST00000257181 IPO7O95373 1038 aaKnown RBP15.94■□□□□ 0.14
PRPF38A-201ENST00000257181 ZFYP08048 801 aaPredicted RBP15.94■□□□□ 0.14
PRPF38A-201ENST00000257181 RDXP35241 583 aaKnown RBP15.94■□□□□ 0.14
PRPF38A-201ENST00000257181 ZC3H12CQ9C0D7 883 aaKnown RBP15.94■□□□□ 0.14
PRPF38A-201ENST00000257181 BLMP54132 1417 aaPredicted RBP15.93■□□□□ 0.14
PRPF38A-201ENST00000257181 MBD5Q9P267 1494 aa15.93■□□□□ 0.14
PRPF38A-201ENST00000257181 ZSCAN31Q96LW9 406 aaPredicted RBP15.93■□□□□ 0.14
PRPF38A-201ENST00000257181 ERBB4Q15303 1308 aa15.93■□□□□ 0.14
PRPF38A-201ENST00000257181 DHX8Q14562 1220 aaKnown RBP15.93■□□□□ 0.14
PRPF38A-201ENST00000257181 SAMD1Q6SPF0 538 aaPredicted RBP15.93■□□□□ 0.14
PRPF38A-201ENST00000257181 CRNKL1Q9BZJ0 848 aaKnown RBP15.93■□□□□ 0.14
PRPF38A-201ENST00000257181 MKNK2Q9HBH9 465 aa15.93■□□□□ 0.14
PRPF38A-201ENST00000257181 NIP7Q9Y221 180 aaKnown RBP eCLIP15.93■□□□□ 0.14
PRPF38A-201ENST00000257181 U3KPZ7 1027 aaPredicted RBP15.93■□□□□ 0.14
PRPF38A-201ENST00000257181 SBNO2Q9Y2G9 1366 aa15.92■□□□□ 0.14
PRPF38A-201ENST00000257181 DESP17661 470 aa15.92■□□□□ 0.14
PRPF38A-201ENST00000257181 PDE4BQ07343 736 aa15.92■□□□□ 0.14
PRPF38A-201ENST00000257181 NOP58Q9Y2X3 529 aaKnown RBP15.92■□□□□ 0.14
PRPF38A-201ENST00000257181 AEBP1Q8IUX7 1158 aa15.92■□□□□ 0.14
PRPF38A-201ENST00000257181 DPY19L2Q6NUT2 758 aa15.92■□□□□ 0.14
PRPF38A-201ENST00000257181 ACSBG1Q96GR2 724 aa15.92■□□□□ 0.14
PRPF38A-201ENST00000257181 NLGN1Q8N2Q7 840 aa15.92■□□□□ 0.14
PRPF38A-201ENST00000257181 BMP2KQ9NSY1 1161 aaPredicted RBP15.92■□□□□ 0.14
PRPF38A-201ENST00000257181 TPRNQ4KMQ1 711 aa15.91■□□□□ 0.14
PRPF38A-201ENST00000257181 MCM10Q7L590 875 aa15.91■□□□□ 0.14
PRPF38A-201ENST00000257181 GCC2Q8IWJ2 1684 aa15.91■□□□□ 0.14
PRPF38A-201ENST00000257181 ABCC3O15438 1527 aa15.91■□□□□ 0.14
PRPF38A-201ENST00000257181 GNPATO15228 680 aa15.91■□□□□ 0.14
PRPF38A-201ENST00000257181 CCDC73Q6ZRK6 1079 aa15.91■□□□□ 0.14
PRPF38A-201ENST00000257181 IQCA1Q86XH1 822 aa15.91■□□□□ 0.14
PRPF38A-201ENST00000257181 FKBP4Q02790 459 aaKnown RBP eCLIP15.91■□□□□ 0.14
PRPF38A-201ENST00000257181 UNC5CLQ8IV45 518 aa15.91■□□□□ 0.14
PRPF38A-201ENST00000257181 PHAXQ9H814 394 aaKnown RBP15.91■□□□□ 0.14
PRPF38A-201ENST00000257181 TET3O43151 1660 aa15.91■□□□□ 0.14
PRPF38A-201ENST00000257181 NCOA3Q9Y6Q9 1424 aa15.91■□□□□ 0.14
PRPF38A-201ENST00000257181 KRT27Q7Z3Y8 459 aa15.9■□□□□ 0.14
PRPF38A-201ENST00000257181 ATP7BP35670 1465 aa15.9■□□□□ 0.14
PRPF38A-201ENST00000257181 LDHAL6AQ6ZMR3 332 aa15.9■□□□□ 0.14
PRPF38A-201ENST00000257181 ZNF76P36508 570 aa15.89■□□□□ 0.14
PRPF38A-201ENST00000257181 RBM6P78332 1123 aaKnown RBP15.89■□□□□ 0.14
PRPF38A-201ENST00000257181 CARD10Q9BWT7 1032 aa15.89■□□□□ 0.14
PRPF38A-201ENST00000257181 CEP131Q9UPN4 1083 aa15.89■□□□□ 0.14
PRPF38A-201ENST00000257181 RNMTO43148 476 aaKnown RBP15.89■□□□□ 0.13
PRPF38A-201ENST00000257181 CYP46A1Q9Y6A2 500 aa15.89■□□□□ 0.13
PRPF38A-201ENST00000257181 GOLGA6L19H0YKK7 550 aa15.89■□□□□ 0.13
PRPF38A-201ENST00000257181 FLIIQ13045 1269 aa15.89■□□□□ 0.13
PRPF38A-201ENST00000257181 FAM98CQ17RN3 349 aaKnown RBP15.89■□□□□ 0.13
PRPF38A-201ENST00000257181 FEZ1Q99689 392 aa15.89■□□□□ 0.13
PRPF38A-201ENST00000257181 ABCF2Q9UG63 623 aa15.88■□□□□ 0.13
PRPF38A-201ENST00000257181 IDH1O75874 414 aaKnown RBP15.88■□□□□ 0.13
PRPF38A-201ENST00000257181 KIF5BP33176 963 aa15.88■□□□□ 0.13
PRPF38A-201ENST00000257181 KSR2Q6VAB6 950 aa15.88■□□□□ 0.13
PRPF38A-201ENST00000257181 CNKSR1Q969H4 720 aa15.88■□□□□ 0.13
PRPF38A-201ENST00000257181 EIF4A2Q14240 407 aaKnown RBP15.88■□□□□ 0.13
PRPF38A-201ENST00000257181 RRP12Q5JTH9 1297 aaKnown RBP15.88■□□□□ 0.13
PRPF38A-201ENST00000257181 NOC3LQ8WTT2 800 aaKnown RBP15.88■□□□□ 0.13
PRPF38A-201ENST00000257181 IL15P40933 162 aaPredicted RBP15.88■□□□□ 0.13
PRPF38A-201ENST00000257181 CC2D2BQ6DHV5 1058 aa15.88■□□□□ 0.13
PRPF38A-201ENST00000257181 GNAT2P19087 354 aa15.88■□□□□ 0.13
PRPF38A-201ENST00000257181 RAB34Q9BZG1 259 aa15.88■□□□□ 0.13
PRPF38A-201ENST00000257181 SLFN5Q08AF3 891 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms