RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 MAP3K19Q56UN5 1328 aa4.74□□□□□ -1.65
UFM1-201ENST00000239878 MEGF6O75095 1541 aa4.74□□□□□ -1.65
UFM1-201ENST00000239878 NOM1Q5C9Z4 860 aaKnown RBP4.74□□□□□ -1.65
UFM1-201ENST00000239878 NLRP13Q86W25 1043 aa4.74□□□□□ -1.65
UFM1-201ENST00000239878 AXIN2Q9Y2T1 843 aa4.74□□□□□ -1.65
UFM1-201ENST00000239878 UBR2Q8IWV8 1755 aa4.74□□□□□ -1.65
UFM1-201ENST00000239878 ERBB3P21860 1342 aa4.73□□□□□ -1.65
UFM1-201ENST00000239878 SPATA31A1Q5TZJ5 1347 aa4.73□□□□□ -1.65
UFM1-201ENST00000239878 VIRMAQ69YN4 1812 aaKnown RBP4.73□□□□□ -1.65
UFM1-201ENST00000239878 CARNS1A5YM72 827 aa4.73□□□□□ -1.65
UFM1-201ENST00000239878 TBC1D12O60347 775 aa4.73□□□□□ -1.65
UFM1-201ENST00000239878 CC2D2BQ6DHV5 1058 aa4.73□□□□□ -1.65
UFM1-201ENST00000239878 FRAT1Q92837 279 aaPredicted RBP4.73□□□□□ -1.65
UFM1-201ENST00000239878 POLR3GLQ9BT43 218 aa4.73□□□□□ -1.65
UFM1-201ENST00000239878 CANXP27824 592 aaKnown RBP4.73□□□□□ -1.65
UFM1-201ENST00000239878 UNC5CLQ8IV45 518 aa4.73□□□□□ -1.65
UFM1-201ENST00000239878 IP6K1Q92551 441 aa4.73□□□□□ -1.65
UFM1-201ENST00000239878 SECISBP2LQ93073 1101 aaKnown RBP4.73□□□□□ -1.65
UFM1-201ENST00000239878 POLKQ9UBT6 870 aa4.73□□□□□ -1.65
UFM1-201ENST00000239878 LY75O60449 1722 aa4.73□□□□□ -1.65
UFM1-201ENST00000239878 QSER1Q2KHR3 1735 aa4.73□□□□□ -1.65
UFM1-201ENST00000239878 AFF2P51816 1311 aa4.73□□□□□ -1.65
UFM1-201ENST00000239878 WDR17Q8IZU2 1322 aa4.73□□□□□ -1.65
UFM1-201ENST00000239878 SMARCA5O60264 1052 aaPredicted RBP4.72□□□□□ -1.65
UFM1-201ENST00000239878 HOXC9P31274 260 aa4.72□□□□□ -1.65
UFM1-201ENST00000239878 SH3D19Q5HYK7 790 aa4.72□□□□□ -1.65
UFM1-201ENST00000239878 POTEAQ6S8J7 498 aa4.72□□□□□ -1.65
UFM1-201ENST00000239878 ABTB2Q8N961 1025 aa4.72□□□□□ -1.65
UFM1-201ENST00000239878 CABLES1Q8TDN4 633 aa4.72□□□□□ -1.65
UFM1-201ENST00000239878 USTQ9Y2C2 406 aa4.72□□□□□ -1.65
UFM1-201ENST00000239878 IVNS1ABPQ9Y6Y0 642 aa4.72□□□□□ -1.65
UFM1-201ENST00000239878 IGSF1Q8N6C5 1336 aa4.72□□□□□ -1.65
UFM1-201ENST00000239878 DOT1LQ8TEK3 1739 aa4.72□□□□□ -1.65
UFM1-201ENST00000239878 SCN11AQ9UI33 1791 aa4.72□□□□□ -1.65
UFM1-201ENST00000239878 IRF6O14896 467 aa4.72□□□□□ -1.65
UFM1-201ENST00000239878 ST18O60284 1047 aa4.72□□□□□ -1.65
UFM1-201ENST00000239878 MAP2K5Q13163 448 aa4.72□□□□□ -1.65
UFM1-201ENST00000239878 ZNF830Q96NB3 372 aaPredicted RBP4.72□□□□□ -1.65
UFM1-201ENST00000239878 REPIN1Q9BWE0 567 aaKnown RBP4.72□□□□□ -1.65
UFM1-201ENST00000239878 CRISPLD2Q9H0B8 497 aa4.72□□□□□ -1.65
UFM1-201ENST00000239878 NUP188Q5SRE5 1749 aa4.72□□□□□ -1.65
UFM1-201ENST00000239878 TMEM121BQ9BXQ6 578 aaPredicted RBP4.72□□□□□ -1.65
UFM1-201ENST00000239878 DNAJC14Q6Y2X3 702 aaPredicted RBP4.71□□□□□ -1.66
UFM1-201ENST00000239878 RASEFQ8IZ41 740 aa4.71□□□□□ -1.66
UFM1-201ENST00000239878 PCMTD1Q96MG8 357 aaPredicted RBP4.71□□□□□ -1.66
UFM1-201ENST00000239878 THRAP3Q9Y2W1 955 aaKnown RBP4.71□□□□□ -1.66
UFM1-201ENST00000239878 IL13P35225 146 aa4.71□□□□□ -1.66
UFM1-201ENST00000239878 ANP32AP39687 249 aaKnown RBP4.71□□□□□ -1.66
UFM1-201ENST00000239878 SKIV2LQ15477 1246 aaKnown RBP4.71□□□□□ -1.66
UFM1-201ENST00000239878 ZNF772Q68DY9 489 aaPredicted RBP4.71□□□□□ -1.66
UFM1-201ENST00000239878 ZNF592Q92610 1267 aa4.71□□□□□ -1.66
UFM1-201ENST00000239878 COL5A3P25940 1745 aaPredicted RBP4.7□□□□□ -1.66
UFM1-201ENST00000239878 NLRP6P59044 892 aa4.7□□□□□ -1.66
UFM1-201ENST00000239878 COG3Q96JB2 828 aa4.7□□□□□ -1.66
UFM1-201ENST00000239878 CARD10Q9BWT7 1032 aa4.7□□□□□ -1.66
UFM1-201ENST00000239878 GGNBP2Q9H3C7 697 aa4.7□□□□□ -1.66
UFM1-201ENST00000239878 KDM3BQ7LBC6 1761 aa4.7□□□□□ -1.66
UFM1-201ENST00000239878 C5P01031 1676 aa4.7□□□□□ -1.66
UFM1-201ENST00000239878 VGLL3A8MV65 326 aa4.7□□□□□ -1.66
UFM1-201ENST00000239878 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.7□□□□□ -1.66
UFM1-201ENST00000239878 TMC1Q8TDI8 760 aa4.7□□□□□ -1.66
UFM1-201ENST00000239878 C8orf37Q96NL8 207 aa4.7□□□□□ -1.66
UFM1-201ENST00000239878 ITGB4P16144 1822 aa4.7□□□□□ -1.66
UFM1-201ENST00000239878 SPDYE5A6NIY4 337 aa4.7□□□□□ -1.66
UFM1-201ENST00000239878 FTSJ3Q8IY81 847 aaKnown RBP4.7□□□□□ -1.66
UFM1-201ENST00000239878 TMUB1Q9BVT8 246 aa4.7□□□□□ -1.66
UFM1-201ENST00000239878 TJP1Q07157 1748 aa4.69□□□□□ -1.66
UFM1-201ENST00000239878 PPP2R1AP30153 589 aa4.69□□□□□ -1.66
UFM1-201ENST00000239878 B4GALNT3Q6L9W6 998 aa4.69□□□□□ -1.66
UFM1-201ENST00000239878 MRRFQ96E11 262 aaKnown RBP4.69□□□□□ -1.66
UFM1-201ENST00000239878 FAM212AQ96EL1 285 aa4.69□□□□□ -1.66
UFM1-201ENST00000239878 GJD4Q96KN9 370 aaPredicted RBP4.69□□□□□ -1.66
UFM1-201ENST00000239878 ZNF330Q9Y3S2 320 aaPredicted RBP4.69□□□□□ -1.66
UFM1-201ENST00000239878 EMILIN1Q9Y6C2 1016 aa4.69□□□□□ -1.66
UFM1-201ENST00000239878 BTAF1O14981 1849 aa4.69□□□□□ -1.66
UFM1-201ENST00000239878 CASZ1Q86V15 1759 aa4.69□□□□□ -1.66
UFM1-201ENST00000239878 DLG5Q8TDM6 1919 aa4.69□□□□□ -1.66
UFM1-201ENST00000239878 KDM4AO75164 1064 aa4.69□□□□□ -1.66
UFM1-201ENST00000239878 EIF4A2Q14240 407 aaKnown RBP4.69□□□□□ -1.66
UFM1-201ENST00000239878 LARP1Q6PKG0 1096 aaKnown RBP4.69□□□□□ -1.66
UFM1-201ENST00000239878 ZHX1Q9UKY1 873 aaPredicted RBP4.69□□□□□ -1.66
UFM1-201ENST00000239878 TRPC5Q9UL62 973 aaPredicted RBP4.69□□□□□ -1.66
UFM1-201ENST00000239878 TMEM88BA6NKF7 163 aa4.68□□□□□ -1.66
UFM1-201ENST00000239878 PYGBP11216 843 aa4.68□□□□□ -1.66
UFM1-201ENST00000239878 NUTM2GQ5VZR2 741 aa4.68□□□□□ -1.66
UFM1-201ENST00000239878 TICAM2Q86XR7 235 aa4.68□□□□□ -1.66
UFM1-201ENST00000239878 TEX2Q8IWB9 1127 aa4.68□□□□□ -1.66
UFM1-201ENST00000239878 PBXIP1Q96AQ6 731 aa4.68□□□□□ -1.66
UFM1-201ENST00000239878 MS4A3Q96HJ5 214 aa4.68□□□□□ -1.66
UFM1-201ENST00000239878 LARP6Q9BRS8 491 aaKnown RBP4.68□□□□□ -1.66
UFM1-201ENST00000239878 CREBZFQ9NS37 354 aa4.68□□□□□ -1.66
UFM1-201ENST00000239878 TMEM51Q9NW97 253 aa4.68□□□□□ -1.66
UFM1-201ENST00000239878 BTG4Q9NY30 223 aa4.68□□□□□ -1.66
UFM1-201ENST00000239878 BCCIPQ9P287 314 aaKnown RBP eCLIP4.68□□□□□ -1.66
UFM1-201ENST00000239878 KCNG1Q9UIX4 513 aa4.68□□□□□ -1.66
UFM1-201ENST00000239878 USP21Q9UK80 565 aa4.68□□□□□ -1.66
UFM1-201ENST00000239878 KDM6AO15550 1401 aaPredicted RBP4.68□□□□□ -1.66
UFM1-201ENST00000239878 KCPQ6ZWJ8 1503 aa4.68□□□□□ -1.66
UFM1-201ENST00000239878 TUBGCP6Q96RT7 1819 aa4.68□□□□□ -1.66
UFM1-201ENST00000239878 POTEFA5A3E0 1075 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms