RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 HTATSF1O43719 755 aaKnown RBP11.15□□□□□ -0.62
SYDE2-201ENST00000234668 NUCB2P80303 420 aa11.15□□□□□ -0.62
SYDE2-201ENST00000234668 DNAAF4Q8WXU2 420 aa11.15□□□□□ -0.62
SYDE2-201ENST00000234668 SKOR2Q2VWA4 1001 aaPredicted RBP11.15□□□□□ -0.62
SYDE2-201ENST00000234668 GPT2Q8TD30 523 aa11.15□□□□□ -0.62
SYDE2-201ENST00000234668 ADRA2BP18089 450 aa11.14□□□□□ -0.63
SYDE2-201ENST00000234668 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.14□□□□□ -0.63
SYDE2-201ENST00000234668 GCP02774 474 aa11.14□□□□□ -0.63
SYDE2-201ENST00000234668 CYP2E1P05181 493 aaPredicted RBP11.14□□□□□ -0.63
SYDE2-201ENST00000234668 BEND3Q5T5X7 828 aa11.14□□□□□ -0.63
SYDE2-201ENST00000234668 ANKLE2Q86XL3 938 aa11.14□□□□□ -0.63
SYDE2-201ENST00000234668 TRIM44Q96DX7 344 aaPredicted RBP11.14□□□□□ -0.63
SYDE2-201ENST00000234668 MAP3K2Q9Y2U5 619 aa11.14□□□□□ -0.63
SYDE2-201ENST00000234668 KLHDC4Q8TBB5 520 aa11.14□□□□□ -0.63
SYDE2-201ENST00000234668 SSH3Q8TE77 659 aa11.14□□□□□ -0.63
SYDE2-201ENST00000234668 NAP1L5Q96NT1 182 aaPredicted RBP11.14□□□□□ -0.63
SYDE2-201ENST00000234668 C9orf78Q9NZ63 289 aaPredicted RBP11.14□□□□□ -0.63
SYDE2-201ENST00000234668 RGPD1P0DJD0 1748 aa11.13□□□□□ -0.63
SYDE2-201ENST00000234668 PIK3C2AO00443 1686 aa11.13□□□□□ -0.63
SYDE2-201ENST00000234668 MYL6BP14649 208 aa11.13□□□□□ -0.63
SYDE2-201ENST00000234668 NASPP49321 788 aaPredicted RBP11.13□□□□□ -0.63
SYDE2-201ENST00000234668 PRIM1P49642 420 aaKnown RBP11.13□□□□□ -0.63
SYDE2-201ENST00000234668 KLHL40Q2TBA0 621 aa11.13□□□□□ -0.63
SYDE2-201ENST00000234668 RNF214Q8ND24 703 aa11.13□□□□□ -0.63
SYDE2-201ENST00000234668 SIL1Q9H173 461 aa11.13□□□□□ -0.63
SYDE2-201ENST00000234668 ZSCAN23Q3MJ62 389 aa11.13□□□□□ -0.63
SYDE2-201ENST00000234668 RASEFQ8IZ41 740 aa11.13□□□□□ -0.63
SYDE2-201ENST00000234668 MPNDQ8N594 471 aa11.12□□□□□ -0.63
SYDE2-201ENST00000234668 ANKRD24Q8TF21 1146 aa11.12□□□□□ -0.63
SYDE2-201ENST00000234668 CCDC9Q9Y3X0 531 aaKnown RBP11.12□□□□□ -0.63
SYDE2-201ENST00000234668 TOPAZ1Q8N9V7 1692 aa11.12□□□□□ -0.63
SYDE2-201ENST00000234668 SYCE3A1L190 88 aa11.12□□□□□ -0.63
SYDE2-201ENST00000234668 C1orf141Q5JVX7 400 aa11.12□□□□□ -0.63
SYDE2-201ENST00000234668 PI4K2BQ8TCG2 481 aa11.12□□□□□ -0.63
SYDE2-201ENST00000234668 CABLES1Q8TDN4 633 aa11.12□□□□□ -0.63
SYDE2-201ENST00000234668 RBSNQ9H1K0 784 aa11.12□□□□□ -0.63
SYDE2-201ENST00000234668 MCCP23508 829 aa11.11□□□□□ -0.63
SYDE2-201ENST00000234668 CCDC8Q9H0W5 538 aaPredicted RBP11.11□□□□□ -0.63
SYDE2-201ENST00000234668 TMEM63CQ9P1W3 806 aa11.11□□□□□ -0.63
SYDE2-201ENST00000234668 ESPNB1AK53 854 aa11.11□□□□□ -0.63
SYDE2-201ENST00000234668 COL9A3Q14050 684 aaPredicted RBP11.11□□□□□ -0.63
SYDE2-201ENST00000234668 PLEKHO1Q53GL0 409 aaPredicted RBP11.11□□□□□ -0.63
SYDE2-201ENST00000234668 CWC22Q9HCG8 908 aaKnown RBP11.11□□□□□ -0.63
SYDE2-201ENST00000234668 STAP2Q9UGK3 403 aa11.11□□□□□ -0.63
SYDE2-201ENST00000234668 RNMTO43148 476 aaKnown RBP11.11□□□□□ -0.63
SYDE2-201ENST00000234668 NWD1Q149M9 1564 aa11.1□□□□□ -0.63
SYDE2-201ENST00000234668 GADD45BO75293 160 aaPredicted RBP11.1□□□□□ -0.63
SYDE2-201ENST00000234668 KIF1BPQ96EK5 621 aa11.1□□□□□ -0.63
SYDE2-201ENST00000234668 ARHGAP23Q9P227 1491 aa11.1□□□□□ -0.63
SYDE2-201ENST00000234668 NALCNQ8IZF0 1738 aa11.09□□□□□ -0.63
SYDE2-201ENST00000234668 PTH1RQ03431 593 aa11.09□□□□□ -0.63
SYDE2-201ENST00000234668 POLA2Q14181 598 aa11.09□□□□□ -0.63
SYDE2-201ENST00000234668 AKAP4Q5JQC9 854 aa11.09□□□□□ -0.63
SYDE2-201ENST00000234668 NLRP2Q9NX02 1062 aa11.09□□□□□ -0.63
SYDE2-201ENST00000234668 NDUFB9Q9Y6M9 179 aa11.09□□□□□ -0.63
SYDE2-201ENST00000234668 ADCY9O60503 1353 aa11.09□□□□□ -0.63
SYDE2-201ENST00000234668 GIGYF1O75420 1035 aaPredicted RBP11.09□□□□□ -0.63
SYDE2-201ENST00000234668 TCEANC2Q96MN5 208 aa11.09□□□□□ -0.63
SYDE2-201ENST00000234668 CHRNA2Q15822 529 aa11.09□□□□□ -0.63
SYDE2-201ENST00000234668 CLEC17AQ6ZS10 378 aa11.09□□□□□ -0.63
SYDE2-201ENST00000234668 EDC3Q96F86 508 aaKnown RBP11.09□□□□□ -0.63
SYDE2-201ENST00000234668 SNX14Q9Y5W7 946 aa11.09□□□□□ -0.63
SYDE2-201ENST00000234668 ADCK5Q3MIX3 580 aa11.08□□□□□ -0.64
SYDE2-201ENST00000234668 AACSQ86V21 672 aa11.08□□□□□ -0.64
SYDE2-201ENST00000234668 ARHGEF25Q86VW2 580 aa11.08□□□□□ -0.64
SYDE2-201ENST00000234668 NFATC2IPQ8NCF5 419 aa11.08□□□□□ -0.64
SYDE2-201ENST00000234668 SUCLG2Q96I99 432 aa11.08□□□□□ -0.64
SYDE2-201ENST00000234668 TLR7Q9NYK1 1049 aaKnown RBP11.08□□□□□ -0.64
SYDE2-201ENST00000234668 DBF4Q9UBU7 674 aaPredicted RBP11.08□□□□□ -0.64
SYDE2-201ENST00000234668 CEMIPQ8WUJ3 1361 aa11.08□□□□□ -0.64
SYDE2-201ENST00000234668 SLIT1O75093 1534 aa11.08□□□□□ -0.64
SYDE2-201ENST00000234668 SGSM2O43147 1006 aa11.08□□□□□ -0.64
SYDE2-201ENST00000234668 LARGE1O95461 756 aa11.08□□□□□ -0.64
SYDE2-201ENST00000234668 CHGBP05060 677 aa11.08□□□□□ -0.64
SYDE2-201ENST00000234668 PRPF40BQ6NWY9 871 aaKnown RBP11.08□□□□□ -0.64
SYDE2-201ENST00000234668 KIAA1211Q6ZU35 1233 aa11.08□□□□□ -0.64
SYDE2-201ENST00000234668 KRT28Q7Z3Y7 464 aa11.08□□□□□ -0.64
SYDE2-201ENST00000234668 BOLA2Q9H3K6 86 aa11.08□□□□□ -0.64
SYDE2-201ENST00000234668 RAB11FIP3O75154 756 aa11.07□□□□□ -0.64
SYDE2-201ENST00000234668 CASTP20810 708 aaKnown RBP11.07□□□□□ -0.64
SYDE2-201ENST00000234668 HSPA4P34932 840 aa11.07□□□□□ -0.64
SYDE2-201ENST00000234668 AK2P54819 239 aa11.07□□□□□ -0.64
SYDE2-201ENST00000234668 PROSER2Q86WR7 435 aaPredicted RBP11.07□□□□□ -0.64
SYDE2-201ENST00000234668 CLASRPQ8N2M8 674 aaKnown RBP11.07□□□□□ -0.64
SYDE2-201ENST00000234668 KCNH5Q8NCM2 988 aa11.07□□□□□ -0.64
SYDE2-201ENST00000234668 BICC1Q9H694 974 aaKnown RBP11.07□□□□□ -0.64
SYDE2-201ENST00000234668 IFIT2P09913 472 aaKnown RBP11.07□□□□□ -0.64
SYDE2-201ENST00000234668 CNTROBQ8N137 903 aa11.07□□□□□ -0.64
SYDE2-201ENST00000234668 FAM227BQ96M60 508 aa11.07□□□□□ -0.64
SYDE2-201ENST00000234668 DIAPH3Q9NSV4 1193 aa11.07□□□□□ -0.64
SYDE2-201ENST00000234668 FMN2Q9NZ56 1722 aa11.07□□□□□ -0.64
SYDE2-201ENST00000234668 PXDNQ92626 1479 aa11.06□□□□□ -0.64
SYDE2-201ENST00000234668 BRD1O95696 1058 aa11.06□□□□□ -0.64
SYDE2-201ENST00000234668 CLCN1P35523 988 aa11.06□□□□□ -0.64
SYDE2-201ENST00000234668 RIC3Q7Z5B4 369 aa11.06□□□□□ -0.64
SYDE2-201ENST00000234668 KAZALD1Q96I82 304 aa11.06□□□□□ -0.64
SYDE2-201ENST00000234668 LSG1Q9H089 658 aaKnown RBP11.06□□□□□ -0.64
SYDE2-201ENST00000234668 CSB-PGBD3P0DP91 1061 aa11.06□□□□□ -0.64
SYDE2-201ENST00000234668 KSR2Q6VAB6 950 aa11.06□□□□□ -0.64
SYDE2-201ENST00000234668 NECAB1Q8N987 351 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms