RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 ADCY9O60503 1353 aa21.62■■□□□ 1.05
VRK1-201ENST00000216639 NKX1-1Q15270 411 aaPredicted RBP21.62■■□□□ 1.05
VRK1-201ENST00000216639 ZNF496Q96IT1 587 aaPredicted RBP21.62■■□□□ 1.05
VRK1-201ENST00000216639 HDAC5Q9UQL6 1122 aa21.62■■□□□ 1.05
VRK1-201ENST00000216639 LRRFIP2Q9Y608 721 aaKnown RBP21.62■■□□□ 1.05
VRK1-201ENST00000216639 COL14A1Q05707 1796 aaKnown RBP21.62■■□□□ 1.05
VRK1-201ENST00000216639 COL22A1Q8NFW1 1626 aaPredicted RBP21.61■■□□□ 1.05
VRK1-201ENST00000216639 ALDH1L1O75891 902 aa21.61■■□□□ 1.05
VRK1-201ENST00000216639 BTG4Q9NY30 223 aa21.61■■□□□ 1.05
VRK1-201ENST00000216639 PROSER3Q2NL68 480 aa21.6■■□□□ 1.05
VRK1-201ENST00000216639 MAP3K2Q9Y2U5 619 aa21.6■■□□□ 1.05
VRK1-201ENST00000216639 C5P01031 1676 aa21.59■■□□□ 1.05
VRK1-201ENST00000216639 PLEKHM2Q8IWE5 1019 aa21.59■■□□□ 1.05
VRK1-201ENST00000216639 EIF5BO60841 1220 aaKnown RBP21.58■■□□□ 1.05
VRK1-201ENST00000216639 DDX54Q8TDD1 881 aaKnown RBP21.58■■□□□ 1.05
VRK1-201ENST00000216639 PDIA6Q15084 440 aa21.58■■□□□ 1.04
VRK1-201ENST00000216639 TBC1D32Q96NH3 1257 aa21.58■■□□□ 1.04
VRK1-201ENST00000216639 APBB1O00213 710 aa21.57■■□□□ 1.04
VRK1-201ENST00000216639 PNMA6EA0A0J9YXQ4 647 aa21.56■■□□□ 1.04
VRK1-201ENST00000216639 LINS1Q8NG48 757 aa21.55■■□□□ 1.04
VRK1-201ENST00000216639 SSH3Q8TE77 659 aa21.55■■□□□ 1.04
VRK1-201ENST00000216639 LRRCC1Q9C099 1032 aa21.55■■□□□ 1.04
VRK1-201ENST00000216639 C9orf78Q9NZ63 289 aaPredicted RBP21.55■■□□□ 1.04
VRK1-201ENST00000216639 USP35Q9P2H5 1018 aa21.55■■□□□ 1.04
VRK1-201ENST00000216639 SHANK3Q9BYB0 1731 aa21.55■■□□□ 1.04
VRK1-201ENST00000216639 MFAP1P55081 439 aaKnown RBP21.55■■□□□ 1.04
VRK1-201ENST00000216639 AIMP1Q12904 312 aaKnown RBP21.55■■□□□ 1.04
VRK1-201ENST00000216639 TTC22Q5TAA0 569 aa21.55■■□□□ 1.04
VRK1-201ENST00000216639 RIC3Q7Z5B4 369 aa21.55■■□□□ 1.04
VRK1-201ENST00000216639 SMARCA5O60264 1052 aaPredicted RBP21.54■■□□□ 1.04
VRK1-201ENST00000216639 NBPF7P0C2Y1 421 aaPredicted RBP21.54■■□□□ 1.04
VRK1-201ENST00000216639 MYL6BP14649 208 aa21.54■■□□□ 1.04
VRK1-201ENST00000216639 NEXNQ0ZGT2 675 aa21.54■■□□□ 1.04
VRK1-201ENST00000216639 EXOC6BQ9Y2D4 811 aa21.54■■□□□ 1.04
VRK1-201ENST00000216639 USP16Q9Y5T5 823 aa21.54■■□□□ 1.04
VRK1-201ENST00000216639 ERBB4Q15303 1308 aa21.54■■□□□ 1.04
VRK1-201ENST00000216639 IBTKQ9P2D0 1353 aaPredicted RBP21.53■■□□□ 1.04
VRK1-201ENST00000216639 LAMB4A4D0S4 1761 aa21.53■■□□□ 1.04
VRK1-201ENST00000216639 C16orf71Q8IYS4 520 aaPredicted RBP21.53■■□□□ 1.04
VRK1-201ENST00000216639 CDC45O75419 566 aa21.52■■□□□ 1.04
VRK1-201ENST00000216639 PPP1R42Q7Z4L9 355 aa21.52■■□□□ 1.04
VRK1-201ENST00000216639 XAGE3Q8WTP9 111 aa21.52■■□□□ 1.04
VRK1-201ENST00000216639 C22orf23Q9BZE7 217 aa21.52■■□□□ 1.04
VRK1-201ENST00000216639 BCL11AQ9H165 835 aa21.52■■□□□ 1.04
VRK1-201ENST00000216639 PHLPP1O60346 1717 aa21.52■■□□□ 1.04
VRK1-201ENST00000216639 RAB11FIP3O75154 756 aa21.52■■□□□ 1.03
VRK1-201ENST00000216639 POLA2Q14181 598 aa21.52■■□□□ 1.03
VRK1-201ENST00000216639 BECN1Q14457 450 aa21.52■■□□□ 1.03
VRK1-201ENST00000216639 COL16A1Q07092 1604 aaPredicted RBP21.51■■□□□ 1.03
VRK1-201ENST00000216639 SRGAP3O43295 1099 aa21.51■■□□□ 1.03
VRK1-201ENST00000216639 TOM1O60784 492 aa21.51■■□□□ 1.03
VRK1-201ENST00000216639 COPS6Q7L5N1 327 aa21.51■■□□□ 1.03
VRK1-201ENST00000216639 HSP90AB4PQ58FF6 505 aa21.5■■□□□ 1.03
VRK1-201ENST00000216639 OSBPL3Q9H4L5 887 aa21.5■■□□□ 1.03
VRK1-201ENST00000216639 PAPPAQ13219 1627 aa21.5■■□□□ 1.03
VRK1-201ENST00000216639 UBR2Q8IWV8 1755 aa21.5■■□□□ 1.03
VRK1-201ENST00000216639 GSPT1P15170 499 aaKnown RBP21.49■■□□□ 1.03
VRK1-201ENST00000216639 ANKRD13DQ6ZTN6 518 aa21.49■■□□□ 1.03
VRK1-201ENST00000216639 TMOD3Q9NYL9 352 aa21.49■■□□□ 1.03
VRK1-201ENST00000216639 GRM8O00222 908 aa21.49■■□□□ 1.03
VRK1-201ENST00000216639 CWF19L2Q2TBE0 894 aaKnown RBP21.49■■□□□ 1.03
VRK1-201ENST00000216639 METTL22Q9BUU2 404 aaPredicted RBP21.49■■□□□ 1.03
VRK1-201ENST00000216639 GLI3P10071 1580 aa21.48■■□□□ 1.03
VRK1-201ENST00000216639 DISP2A7MBM2 1401 aa21.48■■□□□ 1.03
VRK1-201ENST00000216639 UTYO14607 1347 aa21.48■■□□□ 1.03
VRK1-201ENST00000216639 SURF6O75683 361 aaKnown RBP21.48■■□□□ 1.03
VRK1-201ENST00000216639 MTX1Q13505 466 aa21.48■■□□□ 1.03
VRK1-201ENST00000216639 CASC1Q6TDU7 716 aa21.48■■□□□ 1.03
VRK1-201ENST00000216639 TBC1D9Q6ZT07 1266 aa21.48■■□□□ 1.03
VRK1-201ENST00000216639 OTUD7AQ8TE49 926 aaPredicted RBP21.48■■□□□ 1.03
VRK1-201ENST00000216639 PLCH1Q4KWH8 1693 aa21.48■■□□□ 1.03
VRK1-201ENST00000216639 LRP10Q7Z4F1 713 aa21.47■■□□□ 1.03
VRK1-201ENST00000216639 KCPQ6ZWJ8 1503 aa21.47■■□□□ 1.03
VRK1-201ENST00000216639 TNS2Q63HR2 1409 aa21.47■■□□□ 1.03
VRK1-201ENST00000216639 PDE1AP54750 535 aa21.46■■□□□ 1.03
VRK1-201ENST00000216639 CDCA7Q9BWT1 371 aaPredicted RBP21.46■■□□□ 1.03
VRK1-201ENST00000216639 MYD88Q99836 296 aa21.45■■□□□ 1.02
VRK1-201ENST00000216639 NEURL1BA8MQ27 555 aa21.44■■□□□ 1.02
VRK1-201ENST00000216639 EXOC5O00471 708 aa21.44■■□□□ 1.02
VRK1-201ENST00000216639 MX1P20591 662 aa21.44■■□□□ 1.02
VRK1-201ENST00000216639 KIF1BPQ96EK5 621 aa21.44■■□□□ 1.02
VRK1-201ENST00000216639 TOGARAM1Q9Y4F4 1720 aa21.44■■□□□ 1.02
VRK1-201ENST00000216639 PTCD1O75127 700 aaKnown RBP21.43■■□□□ 1.02
VRK1-201ENST00000216639 IGKV5-2P06315 115 aa21.43■■□□□ 1.02
VRK1-201ENST00000216639 RBM25P49756 843 aaKnown RBP21.43■■□□□ 1.02
VRK1-201ENST00000216639 PLBD2Q8NHP8 589 aa21.43■■□□□ 1.02
VRK1-201ENST00000216639 SDSP20132 328 aa21.43■■□□□ 1.02
VRK1-201ENST00000216639 GCKRQ14397 625 aa21.43■■□□□ 1.02
VRK1-201ENST00000216639 TEX13AQ9BXU3 409 aaPredicted RBP21.43■■□□□ 1.02
VRK1-201ENST00000216639 AOX1Q06278 1338 aa21.42■■□□□ 1.02
VRK1-201ENST00000216639 SALL3Q9BXA9 1300 aa21.42■■□□□ 1.02
VRK1-201ENST00000216639 ADAMTS2O95450 1211 aa21.42■■□□□ 1.02
VRK1-201ENST00000216639 SLC4A3P48751 1232 aa21.42■■□□□ 1.02
VRK1-201ENST00000216639 PIP4K2BP78356 416 aa21.42■■□□□ 1.02
VRK1-201ENST00000216639 RHPN1Q8TCX5 695 aa21.42■■□□□ 1.02
VRK1-201ENST00000216639 THRAP3Q9Y2W1 955 aaKnown RBP21.42■■□□□ 1.02
VRK1-201ENST00000216639 PIP4K2AP48426 406 aaPredicted RBP21.41■■□□□ 1.02
VRK1-201ENST00000216639 OS9Q13438 667 aaPredicted RBP21.41■■□□□ 1.02
VRK1-201ENST00000216639 STAP2Q9UGK3 403 aa21.41■■□□□ 1.02
VRK1-201ENST00000216639 LRP6O75581 1613 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms