RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 NUCB1Q02818 461 aa19.59■□□□□ 0.73
LAPTM4A-201ENST00000175091 PDIA6Q15084 440 aa19.59■□□□□ 0.73
LAPTM4A-201ENST00000175091 SPATA31A1Q5TZJ5 1347 aa19.58■□□□□ 0.73
LAPTM4A-201ENST00000175091 FAM161AQ3B820 660 aa19.58■□□□□ 0.73
LAPTM4A-201ENST00000175091 C8orf34Q49A92 452 aa19.58■□□□□ 0.73
LAPTM4A-201ENST00000175091 DNAAF4Q8WXU2 420 aa19.58■□□□□ 0.73
LAPTM4A-201ENST00000175091 PI4KAP2A4QPH2 592 aa19.57■□□□□ 0.72
LAPTM4A-201ENST00000175091 PI4KAP1Q8N8J0 262 aa19.57■□□□□ 0.72
LAPTM4A-201ENST00000175091 ARFGEF2Q9Y6D5 1785 aa19.57■□□□□ 0.72
LAPTM4A-201ENST00000175091 NUTM2BA6NNL0 878 aaPredicted RBP19.57■□□□□ 0.72
LAPTM4A-201ENST00000175091 NUTM2EB1AL46 878 aaPredicted RBP19.57■□□□□ 0.72
LAPTM4A-201ENST00000175091 GNAI3P08754 354 aa19.57■□□□□ 0.72
LAPTM4A-201ENST00000175091 NUTM2AQ8IVF1 878 aaPredicted RBP19.57■□□□□ 0.72
LAPTM4A-201ENST00000175091 THRAP3Q9Y2W1 955 aaKnown RBP19.56■□□□□ 0.72
LAPTM4A-201ENST00000175091 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.56■□□□□ 0.72
LAPTM4A-201ENST00000175091 GNAI2P04899 355 aa19.55■□□□□ 0.72
LAPTM4A-201ENST00000175091 BEND3Q5T5X7 828 aa19.55■□□□□ 0.72
LAPTM4A-201ENST00000175091 CDCA7Q9BWT1 371 aaPredicted RBP19.55■□□□□ 0.72
LAPTM4A-201ENST00000175091 SRCIN1Q9C0H9 1055 aa19.55■□□□□ 0.72
LAPTM4A-201ENST00000175091 LRP10Q7Z4F1 713 aa19.55■□□□□ 0.72
LAPTM4A-201ENST00000175091 CHD1LQ86WJ1 897 aa19.55■□□□□ 0.72
LAPTM4A-201ENST00000175091 KSR2Q6VAB6 950 aa19.54■□□□□ 0.72
LAPTM4A-201ENST00000175091 USP44Q9H0E7 712 aa19.54■□□□□ 0.72
LAPTM4A-201ENST00000175091 DCTPP1Q9H773 170 aa19.54■□□□□ 0.72
LAPTM4A-201ENST00000175091 USP16Q9Y5T5 823 aa19.54■□□□□ 0.72
LAPTM4A-201ENST00000175091 SPATA31A5Q5VU36 1347 aa19.53■□□□□ 0.72
LAPTM4A-201ENST00000175091 SPATA31A7Q8IWB4 1347 aa19.53■□□□□ 0.72
LAPTM4A-201ENST00000175091 NUP188Q5SRE5 1749 aa19.53■□□□□ 0.72
LAPTM4A-201ENST00000175091 TMOD3Q9NYL9 352 aa19.53■□□□□ 0.72
LAPTM4A-201ENST00000175091 ERBB4Q15303 1308 aa19.53■□□□□ 0.72
LAPTM4A-201ENST00000175091 CERKQ8TCT0 537 aa19.52■□□□□ 0.72
LAPTM4A-201ENST00000175091 MAP3K2Q9Y2U5 619 aa19.52■□□□□ 0.72
LAPTM4A-201ENST00000175091 IBTKQ9P2D0 1353 aaPredicted RBP19.52■□□□□ 0.72
LAPTM4A-201ENST00000175091 BCL9O00512 1426 aa19.52■□□□□ 0.72
LAPTM4A-201ENST00000175091 DDX58O95786 925 aaKnown RBP19.52■□□□□ 0.71
LAPTM4A-201ENST00000175091 AEBP2Q6ZN18 517 aaPredicted RBP19.52■□□□□ 0.71
LAPTM4A-201ENST00000175091 LNPKQ9C0E8 428 aa19.52■□□□□ 0.71
LAPTM4A-201ENST00000175091 AFDNP55196 1824 aaKnown RBP19.51■□□□□ 0.71
LAPTM4A-201ENST00000175091 EXOC5O00471 708 aa19.51■□□□□ 0.71
LAPTM4A-201ENST00000175091 HMMRO75330 724 aa19.51■□□□□ 0.71
LAPTM4A-201ENST00000175091 UBTFL1P0CB47 393 aaPredicted RBP19.51■□□□□ 0.71
LAPTM4A-201ENST00000175091 BCL9LQ86UU0 1499 aa19.5■□□□□ 0.71
LAPTM4A-201ENST00000175091 ALDH1L1O75891 902 aa19.49■□□□□ 0.71
LAPTM4A-201ENST00000175091 MYL6BP14649 208 aa19.49■□□□□ 0.71
LAPTM4A-201ENST00000175091 ANKRD45Q5TZF3 282 aa19.49■□□□□ 0.71
LAPTM4A-201ENST00000175091 LRRFIP2Q9Y608 721 aaKnown RBP19.49■□□□□ 0.71
LAPTM4A-201ENST00000175091 SPATA31A6Q5VVP1 1343 aa19.49■□□□□ 0.71
LAPTM4A-201ENST00000175091 BARGINQ6ZT62 677 aa19.49■□□□□ 0.71
LAPTM4A-201ENST00000175091 XAGE3Q8WTP9 111 aa19.48■□□□□ 0.71
LAPTM4A-201ENST00000175091 PIGBQ92521 554 aa19.48■□□□□ 0.71
LAPTM4A-201ENST00000175091 TJP1Q07157 1748 aa19.48■□□□□ 0.71
LAPTM4A-201ENST00000175091 AIMP1Q12904 312 aaKnown RBP19.47■□□□□ 0.71
LAPTM4A-201ENST00000175091 UNC5CLQ8IV45 518 aa19.47■□□□□ 0.71
LAPTM4A-201ENST00000175091 LINS1Q8NG48 757 aa19.47■□□□□ 0.71
LAPTM4A-201ENST00000175091 NBPF7P0C2Y1 421 aaPredicted RBP19.47■□□□□ 0.71
LAPTM4A-201ENST00000175091 DDB1Q16531 1140 aa19.47■□□□□ 0.71
LAPTM4A-201ENST00000175091 COPS6Q7L5N1 327 aa19.47■□□□□ 0.71
LAPTM4A-201ENST00000175091 CICQ96RK0 1608 aaPredicted RBP19.46■□□□□ 0.71
LAPTM4A-201ENST00000175091 PTCD1O75127 700 aaKnown RBP19.46■□□□□ 0.71
LAPTM4A-201ENST00000175091 ATP8B2P98198 1209 aa19.46■□□□□ 0.71
LAPTM4A-201ENST00000175091 PNMA6EA0A0J9YXQ4 647 aa19.45■□□□□ 0.7
LAPTM4A-201ENST00000175091 PIP4K2AP48426 406 aaPredicted RBP19.45■□□□□ 0.7
LAPTM4A-201ENST00000175091 VSIG10Q8N0Z9 540 aa19.45■□□□□ 0.7
LAPTM4A-201ENST00000175091 KAT6BQ8WYB5 2073 aa19.45■□□□□ 0.7
LAPTM4A-201ENST00000175091 NBPF26B4DH59 902 aa19.44■□□□□ 0.7
LAPTM4A-201ENST00000175091 CWF19L2Q2TBE0 894 aaKnown RBP19.44■□□□□ 0.7
LAPTM4A-201ENST00000175091 NBPF14Q5TI25 921 aa19.44■□□□□ 0.7
LAPTM4A-201ENST00000175091 NBPF10Q6P3W6 841 aaKnown RBP19.44■□□□□ 0.7
LAPTM4A-201ENST00000175091 RIC3Q7Z5B4 369 aa19.44■□□□□ 0.7
LAPTM4A-201ENST00000175091 NBPF15Q8N660 670 aa19.44■□□□□ 0.7
LAPTM4A-201ENST00000175091 C8orf37Q96NL8 207 aa19.44■□□□□ 0.7
LAPTM4A-201ENST00000175091 ATG3Q9NT62 314 aa19.44■□□□□ 0.7
LAPTM4A-201ENST00000175091 ASAP1Q9ULH1 1129 aa19.44■□□□□ 0.7
LAPTM4A-201ENST00000175091 UTYO14607 1347 aa19.44■□□□□ 0.7
LAPTM4A-201ENST00000175091 THSD7AQ9UPZ6 1657 aa19.44■□□□□ 0.7
LAPTM4A-201ENST00000175091 FNBP4Q8N3X1 1017 aaPredicted RBP19.44■□□□□ 0.7
LAPTM4A-201ENST00000175091 IGKV5-2P06315 115 aa19.43■□□□□ 0.7
LAPTM4A-201ENST00000175091 VPS72Q15906 364 aa19.43■□□□□ 0.7
LAPTM4A-201ENST00000175091 ANKRD13DQ6ZTN6 518 aa19.43■□□□□ 0.7
LAPTM4A-201ENST00000175091 METTL22Q9BUU2 404 aaPredicted RBP19.43■□□□□ 0.7
LAPTM4A-201ENST00000175091 ANP32AP39687 249 aaKnown RBP19.42■□□□□ 0.7
LAPTM4A-201ENST00000175091 SSH3Q8TE77 659 aa19.42■□□□□ 0.7
LAPTM4A-201ENST00000175091 CCDC9Q9Y3X0 531 aaKnown RBP19.42■□□□□ 0.7
LAPTM4A-201ENST00000175091 NEXNQ0ZGT2 675 aa19.42■□□□□ 0.7
LAPTM4A-201ENST00000175091 NGLY1Q96IV0 654 aa19.42■□□□□ 0.7
LAPTM4A-201ENST00000175091 GRM8O00222 908 aa19.41■□□□□ 0.7
LAPTM4A-201ENST00000175091 MTX1Q13505 466 aa19.41■□□□□ 0.7
LAPTM4A-201ENST00000175091 POLA2Q14181 598 aa19.41■□□□□ 0.7
LAPTM4A-201ENST00000175091 TUBGCP6Q96RT7 1819 aa19.41■□□□□ 0.7
LAPTM4A-201ENST00000175091 NEURL1BA8MQ27 555 aa19.4■□□□□ 0.7
LAPTM4A-201ENST00000175091 A1BGP04217 495 aa19.4■□□□□ 0.7
LAPTM4A-201ENST00000175091 BMP2KLQ5H9B9 411 aa19.4■□□□□ 0.7
LAPTM4A-201ENST00000175091 MARCH10Q8NA82 808 aaPredicted RBP19.4■□□□□ 0.7
LAPTM4A-201ENST00000175091 PLBD2Q8NHP8 589 aa19.4■□□□□ 0.7
LAPTM4A-201ENST00000175091 C9orf78Q9NZ63 289 aaPredicted RBP19.4■□□□□ 0.7
LAPTM4A-201ENST00000175091 PPP1R42Q7Z4L9 355 aa19.39■□□□□ 0.7
LAPTM4A-201ENST00000175091 MYD88Q99836 296 aa19.39■□□□□ 0.7
LAPTM4A-201ENST00000175091 TEX13AQ9BXU3 409 aaPredicted RBP19.39■□□□□ 0.7
LAPTM4A-201ENST00000175091 EXOC6BQ9Y2D4 811 aa19.39■□□□□ 0.7
LAPTM4A-201ENST00000175091 RREB1Q92766 1687 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms