RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 ZNF76P36508 570 aa27.13■■□□□ 1.93
TARBP1-201ENST00000040877 CWC25Q9NXE8 425 aaPredicted RBP27.13■■□□□ 1.93
TARBP1-201ENST00000040877 TTF1Q15361 905 aaPredicted RBP27.13■■□□□ 1.93
TARBP1-201ENST00000040877 SCAND2PQ9GZW5 306 aaPredicted RBP27.13■■□□□ 1.93
TARBP1-201ENST00000040877 WDR7Q9Y4E6 1490 aa27.13■■□□□ 1.93
TARBP1-201ENST00000040877 IQCA1Q86XH1 822 aa27.13■■□□□ 1.93
TARBP1-201ENST00000040877 CDC5LQ99459 802 aaKnown RBP27.13■■□□□ 1.93
TARBP1-201ENST00000040877 PDCL3Q9H2J4 239 aa27.13■■□□□ 1.93
TARBP1-201ENST00000040877 NUP153P49790 1475 aaKnown RBP27.13■■□□□ 1.93
TARBP1-201ENST00000040877 DEF6Q9H4E7 631 aa27.12■■□□□ 1.93
TARBP1-201ENST00000040877 MBIPQ9NS73 344 aa27.12■■□□□ 1.93
TARBP1-201ENST00000040877 CTCFLQ8NI51 663 aaPredicted RBP27.12■■□□□ 1.93
TARBP1-201ENST00000040877 PHAXQ9H814 394 aaKnown RBP27.12■■□□□ 1.93
TARBP1-201ENST00000040877 TANGO6Q9C0B7 1094 aa27.12■■□□□ 1.93
TARBP1-201ENST00000040877 RPGRQ92834 1020 aaKnown RBP27.11■■□□□ 1.93
TARBP1-201ENST00000040877 MAP3K2Q9Y2U5 619 aa27.11■■□□□ 1.93
TARBP1-201ENST00000040877 UPF3BQ9BZI7 483 aaKnown RBP27.11■■□□□ 1.93
TARBP1-201ENST00000040877 NPHP3Q7Z494 1330 aa27.11■■□□□ 1.93
TARBP1-201ENST00000040877 CRACR2BQ8N4Y2 399 aaPredicted RBP27.11■■□□□ 1.93
TARBP1-201ENST00000040877 C20orf194Q5TEA3 1177 aa27.1■■□□□ 1.93
TARBP1-201ENST00000040877 CCDC8Q9H0W5 538 aaPredicted RBP27.1■■□□□ 1.93
TARBP1-201ENST00000040877 ZNF213O14771 459 aa27.1■■□□□ 1.93
TARBP1-201ENST00000040877 GRPEL1Q9HAV7 217 aa27.1■■□□□ 1.93
TARBP1-201ENST00000040877 MINDY4BA8MYZ0 360 aa27.1■■□□□ 1.93
TARBP1-201ENST00000040877 ASXL1Q8IXJ9 1541 aa27.1■■□□□ 1.93
TARBP1-201ENST00000040877 MAP3K11Q16584 847 aa27.09■■□□□ 1.93
TARBP1-201ENST00000040877 DDX11Q96FC9 970 aa27.09■■□□□ 1.93
TARBP1-201ENST00000040877 SSBP05455 408 aaKnown RBP eCLIP27.09■■□□□ 1.93
TARBP1-201ENST00000040877 PPP1R42Q7Z4L9 355 aa27.09■■□□□ 1.93
TARBP1-201ENST00000040877 SYCP2Q9BX26 1530 aa27.09■■□□□ 1.93
TARBP1-201ENST00000040877 CCDC83Q8IWF9 413 aa27.09■■□□□ 1.93
TARBP1-201ENST00000040877 SPC24Q8NBT2 197 aa27.08■■□□□ 1.93
TARBP1-201ENST00000040877 BMP2KLQ5H9B9 411 aa27.08■■□□□ 1.93
TARBP1-201ENST00000040877 RIMS2Q9UQ26 1411 aa27.08■■□□□ 1.93
TARBP1-201ENST00000040877 ABCC10Q5T3U5 1492 aa27.08■■□□□ 1.93
TARBP1-201ENST00000040877 ZBTB3Q9H5J0 574 aa27.08■■□□□ 1.93
TARBP1-201ENST00000040877 LDHCP07864 332 aa27.07■■□□□ 1.92
TARBP1-201ENST00000040877 LIMCH1Q9UPQ0 1083 aa27.07■■□□□ 1.92
TARBP1-201ENST00000040877 TNIP1Q15025 636 aa27.06■■□□□ 1.92
TARBP1-201ENST00000040877 ERLIN2O94905 339 aa27.06■■□□□ 1.92
TARBP1-201ENST00000040877 ZNF444Q8N0Y2 327 aaPredicted RBP27.06■■□□□ 1.92
TARBP1-201ENST00000040877 MPHOSPH10O00566 681 aaKnown RBP27.06■■□□□ 1.92
TARBP1-201ENST00000040877 C8orf76Q96K31 380 aa27.05■■□□□ 1.92
TARBP1-201ENST00000040877 PPIP5K1Q6PFW1 1433 aa27.05■■□□□ 1.92
TARBP1-201ENST00000040877 PI4KAP2A4QPH2 592 aa27.05■■□□□ 1.92
TARBP1-201ENST00000040877 LDHAL6AQ6ZMR3 332 aa27.05■■□□□ 1.92
TARBP1-201ENST00000040877 PI4KAP1Q8N8J0 262 aa27.05■■□□□ 1.92
TARBP1-201ENST00000040877 PRAG1Q86YV5 1406 aa27.05■■□□□ 1.92
TARBP1-201ENST00000040877 SLC12A7Q9Y666 1083 aa27.04■■□□□ 1.92
TARBP1-201ENST00000040877 RAB34Q9BZG1 259 aa27.04■■□□□ 1.92
TARBP1-201ENST00000040877 EIF2AK4Q9P2K8 1649 aaKnown RBP27.03■■□□□ 1.92
TARBP1-201ENST00000040877 NOM1Q5C9Z4 860 aaKnown RBP27.03■■□□□ 1.92
TARBP1-201ENST00000040877 ANKRD13DQ6ZTN6 518 aa27.02■■□□□ 1.92
TARBP1-201ENST00000040877 RBM10P98175 930 aaKnown RBP27.02■■□□□ 1.92
TARBP1-201ENST00000040877 HMG20BQ9P0W2 317 aa27.02■■□□□ 1.92
TARBP1-201ENST00000040877 PPP1R12BO60237 982 aaPredicted RBP27.01■■□□□ 1.91
TARBP1-201ENST00000040877 UQCRFS1P1P0C7P4 283 aa27.01■■□□□ 1.91
TARBP1-201ENST00000040877 GPTP24298 496 aa27.01■■□□□ 1.91
TARBP1-201ENST00000040877 SPTY2D1Q68D10 685 aaPredicted RBP27.01■■□□□ 1.91
TARBP1-201ENST00000040877 UBE3BQ7Z3V4 1068 aa27.01■■□□□ 1.91
TARBP1-201ENST00000040877 DDX46Q7L014 1031 aaKnown RBP27.01■■□□□ 1.91
TARBP1-201ENST00000040877 RANBP6O60518 1105 aaKnown RBP27.01■■□□□ 1.91
TARBP1-201ENST00000040877 TCOF1Q13428 1488 aaKnown RBP27■■□□□ 1.91
TARBP1-201ENST00000040877 ALDH1L1O75891 902 aa27■■□□□ 1.91
TARBP1-201ENST00000040877 CCDC181Q5TID7 509 aa27■■□□□ 1.91
TARBP1-201ENST00000040877 ZCRB1Q8TBF4 217 aaKnown RBP27■■□□□ 1.91
TARBP1-201ENST00000040877 FERMT3Q86UX7 667 aa27■■□□□ 1.91
TARBP1-201ENST00000040877 KRI1Q8N9T8 703 aaKnown RBP27■■□□□ 1.91
TARBP1-201ENST00000040877 AKAP4Q5JQC9 854 aa26.99■■□□□ 1.91
TARBP1-201ENST00000040877 FAM83GA6ND36 823 aa26.99■■□□□ 1.91
TARBP1-201ENST00000040877 CATIPQ7Z7H3 387 aa26.99■■□□□ 1.91
TARBP1-201ENST00000040877 CCDC112Q8NEF3 446 aa26.99■■□□□ 1.91
TARBP1-201ENST00000040877 SHANK2Q9UPX8 1470 aa26.99■■□□□ 1.91
TARBP1-201ENST00000040877 IFIT3O14879 490 aaKnown RBP26.99■■□□□ 1.91
TARBP1-201ENST00000040877 HDAC1Q13547 482 aaPredicted RBP26.99■■□□□ 1.91
TARBP1-201ENST00000040877 ANO10Q9NW15 660 aa26.99■■□□□ 1.91
TARBP1-201ENST00000040877 POLR3AO14802 1390 aaPredicted RBP26.98■■□□□ 1.91
TARBP1-201ENST00000040877 BAG3O95817 575 aa26.98■■□□□ 1.91
TARBP1-201ENST00000040877 PIBF1Q8WXW3 757 aa26.98■■□□□ 1.91
TARBP1-201ENST00000040877 CTAGE5O15320 804 aa26.98■■□□□ 1.91
TARBP1-201ENST00000040877 IQCEQ6IPM2 695 aa26.98■■□□□ 1.91
TARBP1-201ENST00000040877 KIAA0556O60303 1618 aa26.98■■□□□ 1.91
TARBP1-201ENST00000040877 CTTNBP2Q8WZ74 1663 aa26.98■■□□□ 1.91
TARBP1-201ENST00000040877 SSRP1Q08945 709 aaKnown RBP26.97■■□□□ 1.91
TARBP1-201ENST00000040877 PTPRKQ15262 1439 aa26.97■■□□□ 1.91
TARBP1-201ENST00000040877 GOLGA8AA7E2F4 631 aa26.97■■□□□ 1.91
TARBP1-201ENST00000040877 GOLGA8BA8MQT2 603 aa26.97■■□□□ 1.91
TARBP1-201ENST00000040877 EIF5P55010 431 aaKnown RBP26.97■■□□□ 1.91
TARBP1-201ENST00000040877 DESP17661 470 aa26.97■■□□□ 1.91
TARBP1-201ENST00000040877 CCDC12Q8WUD4 166 aaPredicted RBP26.97■■□□□ 1.91
TARBP1-201ENST00000040877 UNC13AQ9UPW8 1703 aa26.96■■□□□ 1.91
TARBP1-201ENST00000040877 CHRNA2Q15822 529 aa26.96■■□□□ 1.91
TARBP1-201ENST00000040877 FLT4P35916 1363 aa26.96■■□□□ 1.91
TARBP1-201ENST00000040877 WDHD1O75717 1129 aaPredicted RBP26.96■■□□□ 1.91
TARBP1-201ENST00000040877 TMEM266Q2M3C6 531 aa26.96■■□□□ 1.91
TARBP1-201ENST00000040877 CCDC183Q5T5S1 534 aa26.96■■□□□ 1.91
TARBP1-201ENST00000040877 GOLIM4O00461 696 aa26.96■■□□□ 1.91
TARBP1-201ENST00000040877 SMARCC1Q92922 1105 aaPredicted RBP26.96■■□□□ 1.91
TARBP1-201ENST00000040877 CCDC152Q4G0S7 254 aa26.95■■□□□ 1.91
TARBP1-201ENST00000040877 TTC22Q5TAA0 569 aa26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms