RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 PGS1Q32NB8 556 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 CWF19L1Q69YN2 538 aaKnown RBP8.5□□□□□ -1.05
PHGDH-219ENST00000641513 PPP4R4Q6NUP7 873 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 NOXRED1Q6NXP6 359 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 TSSK4Q6SA08 328 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 RETREG3Q86VR2 466 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 CARM1Q86X55 608 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 NRROSQ86YC3 692 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 FAM20CQ8IXL6 584 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 LAS2Q8IYD9 372 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 TBC1D19Q8N5T2 526 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 KRTCAP2Q8N6L1 136 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 C1orf52Q8N6N3 182 aaKnown RBP8.5□□□□□ -1.05
PHGDH-219ENST00000641513 RNF148Q8N7C7 305 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 HIPK4Q8NE63 616 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 FAM46DQ8NEK8 389 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 OR10G6Q8NH81 332 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 PROKR1Q8TCW9 393 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 GPBAR1Q8TDU6 330 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 GFM2Q969S9 779 aaKnown RBP8.5□□□□□ -1.05
PHGDH-219ENST00000641513 SH3GL3Q99963 347 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 ORAI3Q9BRQ5 295 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 MENTQ9BUN1 341 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 ANKRD60Q9BZ19 345 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 COPS7BQ9H9Q2 264 aaPredicted RBP8.5□□□□□ -1.05
PHGDH-219ENST00000641513 DMRT3Q9NQL9 472 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 TUBA8Q9NY65 449 aaPredicted RBP8.5□□□□□ -1.05
PHGDH-219ENST00000641513 PTTG2Q9NZH5 202 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 KLF15Q9UIH9 416 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 PCOLCE2Q9UKZ9 415 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 RUVBL1Q9Y265 456 aaKnown RBP8.5□□□□□ -1.05
PHGDH-219ENST00000641513 DLGAP4Q9Y2H0 992 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 PCDHA9Q9Y5H5 950 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 CACNA1IQ9P0X4 2223 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 GNG14A0A1W2PPG7 69 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 GSAPA4D1B5 854 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 TRIM64A6NGJ6 449 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 TRIM64CA6NLI5 447 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 K7ESF4 209 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 NME4O00746 187 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 PCDH7O60245 1069 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 ETHE1O95571 254 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 CLPTM1O96005 669 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 PDGFBP01127 241 aaPredicted RBP8.49□□□□□ -1.05
PHGDH-219ENST00000641513 WNT1P04628 370 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 CHRM5P08912 532 aaPredicted RBP8.49□□□□□ -1.05
PHGDH-219ENST00000641513 ZCCHC18P0CG32 403 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 SDC1P18827 310 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 IL10P22301 178 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 JAK1P23458 1154 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 SLC6A2P23975 617 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 PSMA4P25789 261 aaKnown RBP8.49□□□□□ -1.05
PHGDH-219ENST00000641513 HTR1EP28566 365 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 S100A3P33764 101 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 PI4KAP42356 2102 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 FNTBP49356 437 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 C21orf59P57076 290 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 RACK1P63244 317 aaKnown RBP8.49□□□□□ -1.05
PHGDH-219ENST00000641513 REEP5Q00765 189 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 PRDX1Q06830 199 aaKnown RBP8.49□□□□□ -1.05
PHGDH-219ENST00000641513 BIRC2Q13490 618 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 MAP7Q14244 749 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 CAPRIN1Q14444 709 aaKnown RBP8.49□□□□□ -1.05
PHGDH-219ENST00000641513 KIAA0040Q15053 153 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 ELOCQ15369 112 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 FAM174BQ3ZCQ3 159 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 KCTD21Q4G0X4 260 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 SPIN4Q56A73 249 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 C10orf62Q5T681 223 aaPredicted RBP8.49□□□□□ -1.05
PHGDH-219ENST00000641513 IYDQ6PHW0 289 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 SLC2A7Q6PXP3 512 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 PROSER1Q86XN7 944 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 SLC15A3Q8IY34 581 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 GLB1L3Q8NCI6 653 aaPredicted RBP8.49□□□□□ -1.05
PHGDH-219ENST00000641513 TNIP2Q8NFZ5 429 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 OR52E4Q8NGH9 312 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 OR2A1Q8NGT9 310 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 DNAJB8Q8NHS0 232 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 LMX1AQ8TE12 382 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 ZDHHC1Q8WTX9 485 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 NUDT8Q8WV74 236 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 PATE1Q8WXA2 126 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 EME1Q96AY2 570 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 SLCO4A1Q96BD0 722 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 LRRC58Q96CX6 371 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 DGCR14Q96DF8 476 aaKnown RBP8.49□□□□□ -1.05
PHGDH-219ENST00000641513 DTNBP1Q96EV8 351 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 NECAB3Q96P71 396 aaPredicted RBP8.49□□□□□ -1.05
PHGDH-219ENST00000641513 SLC39A3Q9BRY0 314 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 IER2Q9BTL4 223 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 OR51B5Q9H339 312 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 TM9SF3Q9HD45 589 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 CD320Q9NPF0 282 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 AGPAT4Q9NRZ5 378 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 PNPLA3Q9NST1 481 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 SPHK1Q9NYA1 384 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 AHSPQ9NZD4 102 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 OR6C2Q9NZP2 312 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 MAP10Q9P2G4 905 aa8.49□□□□□ -1.05
PHGDH-219ENST00000641513 CPNE7Q9UBL6 633 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms