RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	EPB42	P16452	691 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	SERPINB1	P30740	379 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	STXBP1	P61764	594 aa	Known RBP	13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	MEF2A	Q02078	507 aa	Predicted RBP	13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	IRF8	Q02556	426 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	NFATC3	Q12968	1075 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	AIMP2	Q13155	320 aa	Known RBP	13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	E2F2	Q14209	437 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	SLC29A2	Q14542	456 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	VWA2	Q5GFL6	755 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	XKR6	Q5GH73	641 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	FAM69B	Q5VUD6	431 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	ZNF605	Q86T29	641 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	SNX31	Q8N9S9	440 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	KCT2	Q8NC54	265 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	ZNF740	Q8NDX6	193 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	OR9A4	Q8NGU2	314 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	GPR78	Q96P69	363 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	OR1F2P	Q96R84	312 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	SLC6A16	Q9GZN6	736 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	SOX17	Q9H6I2	414 aa	Predicted RBP	13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	C5AR2	Q9P296	337 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	ADGRE2	Q9UHX3	823 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	ANAPC2	Q9UJX6	822 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	ZNF451	Q9Y4E5	1061 aa		13.52	□□□□□ -0.25
SDHD-209	ENST00000640554	ATM	Q13315	3056 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	SNRNP200	O75643	2136 aa	Known RBP	13.51	□□□□□ -0.25
SDHD-209	ENST00000640554		A0A088AWK7	358 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554		A0A1W2PQ72	361 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	ANKDD1B	A6NHY2	528 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	IDS	B3KWA1	339 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	UBXN8	O00124	270 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	GALR3	O60755	368 aa	Predicted RBP	13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	BMP10	O95393	424 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	ALPP	P05187	535 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	SERPIND1	P05546	499 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	HEXB	P07686	556 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	FAM153B	P0C7A2	387 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	ZNF10	P21506	573 aa	Predicted RBP	13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	PGD	P52209	483 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	AP2B1	P63010	937 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	IRF9	Q00978	393 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	TGM3	Q08188	693 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	SLBP	Q14493	270 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	NAA30	Q147X3	362 aa	Predicted RBP	13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	SETDB1	Q15047	1291 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	C18orf21	Q32NC0	220 aa	Predicted RBP	13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	TUBB8	Q3ZCM7	444 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	FAM153C	Q494X1	144 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	UBAP2	Q5T6F2	1119 aa	Known RBP	13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	IRAK1BP1	Q5VVH5	260 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	KIRREL2	Q6UWL6	708 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	ASB18	Q6ZVZ8	466 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	ANKRD53	Q8N9V6	530 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	SRFBP1	Q8NEF9	429 aa	Known RBP	13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	OR51Q1	Q8NH59	317 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	UHMK1	Q8TAS1	419 aa	Known RBP	13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	ACMSD	Q8TDX5	336 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	METTL21A	Q8WXB1	218 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	MRPL57	Q9BQC6	102 aa	Known RBP	13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	TRIM55	Q9BYV6	548 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	RHBG	Q9H310	441 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	ANGPTL3	Q9Y5C1	460 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	HS3ST3B1	Q9Y662	390 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	PIEZO2	Q9H5I5	2752 aa		13.51	□□□□□ -0.25
SDHD-209	ENST00000640554	ESPN	B1AK53	854 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	SOCS6	O14544	535 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	KALRN	O60229	2985 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	UGDH	O60701	494 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	WFS1	O76024	890 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	KLHL18	O94889	574 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	ATXN8OS	P0DMR3	200 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	SMIM10L1	P0DMW3	83 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	ICAM2	P13598	275 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	ACPP	P15309	386 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	IL1RN	P18510	177 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	VARS	P26640	1264 aa	Known RBP	13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	HNF4A	P41235	474 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	GLRB	P48167	497 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	KLRB1	Q12918	225 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	CHIT1	Q13231	466 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	DOC2A	Q14183	400 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	MYBPC3	Q14896	1274 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	PFKFB4	Q16877	469 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	TECRL	Q5HYJ1	363 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	CPZ	Q66K79	652 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	GALNT16	Q8N428	558 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	DTWD1	Q8N5C7	304 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	LRRN4CL	Q8ND94	238 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	OR11G2	Q8NGC1	345 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	UTP15	Q8TED0	518 aa	Known RBP	13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	CREB3L4	Q8TEY5	395 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	EXT2	Q93063	718 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	SMIM10	Q96HG1	83 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	MACROD1	Q9BQ69	325 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	SPNS1	Q9H2V7	528 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	GPR83	Q9NYM4	423 aa		13.5	□□□□□ -0.25
SDHD-209	ENST00000640554	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms