RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 HPF1Q9NWY4 346 aa10.22□□□□□ -0.77
PTP4A1-207ENST00000639568 NDRG3Q9UGV2 375 aa10.22□□□□□ -0.77
PTP4A1-207ENST00000639568 FBXW2Q9UKT8 454 aa10.22□□□□□ -0.77
PTP4A1-207ENST00000639568 NPFFR2Q9Y5X5 522 aa10.22□□□□□ -0.77
PTP4A1-207ENST00000639568 ANK3Q12955 4377 aaKnown RBP10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 A0A1W2PPV9 198 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 FEZF1A0PJY2 475 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 RNF223E7ERA6 249 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 H7C0S8 307 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 P2RX6O15547 441 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 HCN1O60741 890 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 GLSO94925 669 aaPredicted RBP10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 C1orf105O95561 183 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 IL1RNP18510 177 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 CCNFP41002 786 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 MEF2AQ02078 507 aaPredicted RBP10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 PRPSAP1Q14558 356 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 TMED2Q15363 201 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 SIX1Q15475 284 aaPredicted RBP10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 MEI1Q5TIA1 1274 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 C20orf204Q6ZNR8 217 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 SEM1Q6ZVN7 128 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 PRSS41Q7RTY9 318 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 VSIG1Q86XK7 387 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 GPALPP1Q8IXQ4 340 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 ARMC10Q8N2F6 343 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 ENOX1Q8TC92 643 aaKnown RBP10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 SYN2Q92777 582 aaPredicted RBP10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 LRRC45Q96CN5 670 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 PEX11GQ96HA9 241 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 FOPNLQ96NB1 174 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 OR1F2PQ96R84 312 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 FAM173AQ9BQD7 235 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 EPB41L4BQ9H329 900 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 SYNPO2LQ9H987 977 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 IL1RL2Q9HB29 575 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 ANKHQ9HCJ1 492 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 AIPL1Q9NZN9 384 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 SAE1Q9UBE0 346 aaPredicted RBP10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 AAR2Q9Y312 384 aaKnown RBP10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 BOLA1Q9Y3E2 137 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 PCDHGB3Q9Y5G1 929 aa10.21□□□□□ -0.77
PTP4A1-207ENST00000639568 A0A087X1B8 175 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 TRBV11-1A0A0K0K1C0 115 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 C3orf70A6NLC5 250 aaPredicted RBP10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 A8MV72 311 aaPredicted RBP10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 G3V3Y1 287 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 CD5LO43866 347 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 GPC4O75487 556 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 CCNDBP1O95273 360 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 CELA3AP09093 270 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 SKILP12757 684 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 CNR1P21554 472 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 JAK1P23458 1154 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 CEACAM8P31997 349 aaPredicted RBP10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 TIMP3P35625 211 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 BDKRB1P46663 353 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 CLCN2P51788 898 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 NR1H2P55055 460 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 RELAQ04206 551 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 ITPRIPL1Q6GPH6 555 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 BHLHB9Q6PI77 547 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 SUSD1Q6UWL2 747 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 KIAA0408Q6ZU52 694 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 MICALCLQ6ZW33 695 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 LACC1Q8IV20 430 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 SHISA5Q8N114 240 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 PPP1R14CQ8TAE6 165 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 ASB15Q8WXK1 588 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 HSPBAP1Q96EW2 488 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 CDKN2AIPNLQ96HQ2 116 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 SCN2AQ99250 2005 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 EBNA1BP2Q99848 306 aaKnown RBP10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 RBM24Q9BX46 236 aaKnown RBP10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 PLA2G12AQ9BZM1 189 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 RBSNQ9H1K0 784 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 NLE1Q9NVX2 485 aaPredicted RBP10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 SPATA7Q9P0W8 599 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 CTTNBP2NLQ9P2B4 639 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 LCMT1Q9UIC8 334 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 CDC42EP3Q9UKI2 254 aa10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 YARS2Q9Y2Z4 477 aaKnown RBP10.2□□□□□ -0.78
PTP4A1-207ENST00000639568 DNAJC13O75165 2243 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 SNRNP200O75643 2136 aaKnown RBP10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 TGP01266 2768 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 IGKV1-8A0A0C4DH67 115 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 A0A0G2JMM0 328 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 A0A1W2PPB8 328 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 A0A1W2PRS3 328 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 KRT87PA6NCN2 255 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 SAGE2PA6NJ88 616 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 KIR3DP1A8MWS1 328 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 AHRRA9YTQ3 701 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 OR1I1O60431 355 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 RDH16O75452 317 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 EPPINO95925 133 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 FHP07954 510 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 MSNP26038 577 aaKnown RBP10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 ADRA1AP35348 466 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 OPRM1P35372 400 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms