RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 HERC3Q15034 1050 aa15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 RBBP5Q15291 538 aaKnown RBP15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 C18orf21Q32NC0 220 aaPredicted RBP15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 GRTP1Q5TC63 336 aa15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 TMEM205Q6UW68 189 aa15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 NXPE4Q6UWF7 544 aa15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 IGFL2Q6UWQ7 119 aa15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 ISLR2Q6UXK2 745 aa15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 CUZD1Q86UP6 607 aa15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 SHISA5Q8N114 240 aa15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 CISD2Q8N5K1 135 aaKnown RBP15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 FBF1Q8TES7 1133 aa15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 RHBDF1Q96CC6 855 aa15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 SNRNP40Q96DI7 357 aaKnown RBP15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 CNDP1Q96KN2 507 aa15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 LRRC1Q9BTT6 524 aa15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 RBCK1Q9BYM8 510 aa15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 SLC29A3Q9BZD2 475 aa15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 ZNF700Q9H0M5 742 aa15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 LRRC4CQ9HCJ2 640 aa15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 ZFP69BQ9UJL9 534 aa15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 DOPEY2Q9Y3R5 2298 aa15.84■□□□□ 0.13
CACNA1A-259ENST00000638114 FAM155BO75949 473 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 SERPINA7P05543 415 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 CELA2AP08217 269 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 ALOX12P18054 663 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 AHRP35869 848 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 GDF5P43026 501 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 GLRBP48167 497 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 RAB10P61026 200 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 ATP6V0D1P61421 351 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 MFAP5Q13361 173 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 SLMAPQ14BN4 828 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 PCOLCEQ15113 449 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 TGFBIQ15582 683 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 DEFB134Q4QY38 66 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 LANCL3Q6ZV70 420 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 GPSM1Q86YR5 675 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 FAM26EQ8N5C1 309 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 DNAJB14Q8TBM8 379 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 NT5CQ8TCD5 201 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 BRIX1Q8TDN6 353 aaKnown RBP15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 ZNF592Q92610 1267 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 C19orf60Q96EN9 201 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 PEX11GQ96HA9 241 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 CYTH2Q99418 400 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 WWOXQ9NZC7 414 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 PTGFRNQ9P2B2 879 aa15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 C19orf25Q9UFG5 118 aaPredicted RBP15.83■□□□□ 0.12
CACNA1A-259ENST00000638114 OR2W5A6NFC9 320 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 TCP11X1B4DZS4 312 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 GALR3O60755 368 aaPredicted RBP15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 WFS1O76024 890 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 CYC1P08574 325 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 ZNF888P0CJ79 500 aaPredicted RBP15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 CD1DP15813 335 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 GNAZP19086 355 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 HNF4AP41235 474 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 SLC6A12P48065 614 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 SKP1P63208 163 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 NAB1Q13506 487 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 EFTUD2Q15029 972 aaKnown RBP eCLIP15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 ZKSCAN8Q15776 578 aaPredicted RBP15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 WHAMMP3Q1A5X7 153 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 CRB2Q5IJ48 1285 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 RIPOR1Q6ZS17 1223 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 RAPH1Q70E73 1250 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 ABHD13Q7L211 337 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 TCAIMQ8N3R3 496 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 AFAP1L2Q8N4X5 818 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 SIRT6Q8N6T7 355 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 ANKRD53Q8N9V6 530 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 TRPV3Q8NET8 790 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 OR5T3Q8NGG3 340 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 LMF1Q96S06 567 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 TUBB6Q9BUF5 446 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 ASF1BQ9NVP2 202 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 PCDHGA10Q9Y5H3 936 aa15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 COPG1Q9Y678 874 aaKnown RBP15.82■□□□□ 0.12
CACNA1A-259ENST00000638114 IGHV3-20A0A0C4DH32 117 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 CTAGE15A4D2H0 777 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 CLEC18AA5D8T8 446 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 H2AFYO75367 372 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 CDC123O75794 336 aaPredicted RBP15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 SEC24DO94855 1032 aaPredicted RBP15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 B3GALT4O96024 378 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 C1GALT1C1LP0DN25 315 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 ICAM2P13598 275 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 AP2B1P63010 937 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 OLR1P78380 273 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 GUCY2DQ02846 1103 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 SRSF1Q07955 248 aaKnown RBP eCLIP15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 CDC16Q13042 620 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 MRPL49Q13405 166 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 ZNF169Q14929 603 aaPredicted RBP15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 OR4D1Q15615 310 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 FBXO48Q5FWF7 155 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 NIPAL1Q6NVV3 410 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 CLEC18BQ6UXF7 455 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 CPEB2Q7Z5Q1 589 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms