RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 IQCKQ8N0W5 287 aa16.75■□□□□ 0.27
PNKP-230ENST00000638016 ATL1Q8WXF7 558 aa16.75■□□□□ 0.27
PNKP-230ENST00000638016 ESAMQ96AP7 390 aa16.75■□□□□ 0.27
PNKP-230ENST00000638016 PEX11GQ96HA9 241 aa16.75■□□□□ 0.27
PNKP-230ENST00000638016 TMEM79Q9BSE2 394 aa16.75■□□□□ 0.27
PNKP-230ENST00000638016 AICDAQ9GZX7 198 aa16.75■□□□□ 0.27
PNKP-230ENST00000638016 ANKHQ9HCJ1 492 aa16.75■□□□□ 0.27
PNKP-230ENST00000638016 LRRC4CQ9HCJ2 640 aa16.75■□□□□ 0.27
PNKP-230ENST00000638016 NSMCE4AQ9NXX6 385 aa16.75■□□□□ 0.27
PNKP-230ENST00000638016 PLA2G3Q9NZ20 509 aa16.75■□□□□ 0.27
PNKP-230ENST00000638016 PCDHGA10Q9Y5H3 936 aa16.75■□□□□ 0.27
PNKP-230ENST00000638016 CPAMD8Q8IZJ3 1885 aa16.75■□□□□ 0.27
PNKP-230ENST00000638016 ICE1Q9Y2F5 2266 aa16.75■□□□□ 0.27
PNKP-230ENST00000638016 LOC102723996A0A087X1L8 192 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 A0A1W2PQ72 361 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 NDC80O14777 642 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 WDR47O94967 919 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 ZNF888P0CJ79 500 aaPredicted RBP16.74■□□□□ 0.27
PNKP-230ENST00000638016 C8orf89P0DMQ9 161 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 ITGAMP11215 1152 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 ST13P50502 369 aaKnown RBP16.74■□□□□ 0.27
PNKP-230ENST00000638016 SLC12A2P55011 1212 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 POU4F1Q01851 419 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 NR6A1Q15406 480 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 OR4D1Q15615 310 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 KBTBD12Q3ZCT8 623 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 DEFB134Q4QY38 66 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 FRA10AC1Q70Z53 315 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 CMC1Q7Z7K0 106 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 KBTBD2Q8IY47 623 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 AFAP1L2Q8N4X5 818 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 FAM26EQ8N5C1 309 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 PPM1NQ8N819 430 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 PPP4R1Q8TF05 950 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 TM9SF4Q92544 642 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 CDKL2Q92772 493 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 TSLPQ969D9 159 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 RHBDF1Q96CC6 855 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 GPR22Q99680 433 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 CPNE1Q99829 537 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 LRRC1Q9BTT6 524 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 SARGQ9BW04 601 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 KLHL31Q9H511 634 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 POPDC3Q9HBV1 291 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 DYRK1BQ9Y463 629 aa16.74■□□□□ 0.27
PNKP-230ENST00000638016 SPTBN1Q01082 2364 aaKnown RBP16.73■□□□□ 0.27
PNKP-230ENST00000638016 USP9YO00507 2555 aaPredicted RBP16.73■□□□□ 0.27
PNKP-230ENST00000638016 TAPBPO15533 448 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 PRAMEF4O60810 478 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 SEMA7AO75326 666 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 CCDC166P0CW27 439 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 CD1DP15813 335 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 GP5P40197 560 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 MAGEA4P43358 317 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 SLC6A12P48065 614 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 RAB8AP61006 207 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 CDKL1Q00532 357 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 HYAL2Q12891 473 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 MFAP5Q13361 173 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 RBBP5Q15291 538 aaKnown RBP16.73■□□□□ 0.27
PNKP-230ENST00000638016 EIF2S3LQ2VIR3 472 aaKnown RBP16.73■□□□□ 0.27
PNKP-230ENST00000638016 PRAMEF9Q5VWM5 478 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 NXPE4Q6UWF7 544 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 ISLR2Q6UXK2 745 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 ADAMTSL2Q86TH1 951 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 DNAJB14Q8TBM8 379 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 FBF1Q8TES7 1133 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 EXT2Q93063 718 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 DERL2Q9GZP9 239 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 ZNF700Q9H0M5 742 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 RAB17Q9H0T7 212 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 PELI2Q9HAT8 420 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 RIC8BQ9NVN3 520 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 TXNDC16Q9P2K2 825 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 ZFP69BQ9UJL9 534 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 ASB1Q9Y576 335 aa16.73■□□□□ 0.27
PNKP-230ENST00000638016 GALR3O60755 368 aaPredicted RBP16.72■□□□□ 0.27
PNKP-230ENST00000638016 SERPINA7P05543 415 aa16.72■□□□□ 0.27
PNKP-230ENST00000638016 SOX11P35716 441 aa16.72■□□□□ 0.27
PNKP-230ENST00000638016 SRSF11Q05519 484 aaKnown RBP16.72■□□□□ 0.27
PNKP-230ENST00000638016 DLG1Q12959 904 aa16.72■□□□□ 0.27
PNKP-230ENST00000638016 TGFBIQ15582 683 aa16.72■□□□□ 0.27
PNKP-230ENST00000638016 ZKSCAN8Q15776 578 aaPredicted RBP16.72■□□□□ 0.27
PNKP-230ENST00000638016 ADNP2Q6IQ32 1131 aa16.72■□□□□ 0.27
PNKP-230ENST00000638016 ANKRD37Q7Z713 158 aa16.72■□□□□ 0.27
PNKP-230ENST00000638016 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.72■□□□□ 0.27
PNKP-230ENST00000638016 NT5CQ8TCD5 201 aa16.72■□□□□ 0.27
PNKP-230ENST00000638016 UTP15Q8TED0 518 aaKnown RBP16.72■□□□□ 0.27
PNKP-230ENST00000638016 ANKRD7Q92527 254 aa16.72■□□□□ 0.27
PNKP-230ENST00000638016 MRRFQ96E11 262 aaKnown RBP16.72■□□□□ 0.27
PNKP-230ENST00000638016 VPS50Q96JG6 964 aa16.72■□□□□ 0.27
PNKP-230ENST00000638016 IMMP1LQ96LU5 166 aa16.72■□□□□ 0.27
PNKP-230ENST00000638016 CYTH2Q99418 400 aa16.72■□□□□ 0.27
PNKP-230ENST00000638016 EPS8L2Q9H6S3 715 aa16.72■□□□□ 0.27
PNKP-230ENST00000638016 LANCL2Q9NS86 450 aa16.72■□□□□ 0.27
PNKP-230ENST00000638016 SLC22A7Q9Y694 548 aa16.72■□□□□ 0.27
PNKP-230ENST00000638016 A0A0G2JN53 185 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 BLACEA4D250 179 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 KLHL41O60662 606 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 URI1O94763 535 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms