RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 C1orf185Q5T7R7 199 aa7.66□□□□□ -1.18
VPS11-209ENST00000622309 OR6B2Q6IFH4 312 aa7.66□□□□□ -1.18
VPS11-209ENST00000622309 ZNF574Q6ZN55 896 aaPredicted RBP7.66□□□□□ -1.18
VPS11-209ENST00000622309 IKBIPQ70UQ0 350 aa7.66□□□□□ -1.18
VPS11-209ENST00000622309 MICALL2Q8IY33 904 aa7.66□□□□□ -1.18
VPS11-209ENST00000622309 OR2T12Q8NG77 320 aa7.66□□□□□ -1.18
VPS11-209ENST00000622309 ASZ1Q8WWH4 475 aa7.66□□□□□ -1.18
VPS11-209ENST00000622309 KIAA1143Q96AT1 154 aaPredicted RBP7.66□□□□□ -1.18
VPS11-209ENST00000622309 NXPE2Q96DL1 559 aa7.66□□□□□ -1.18
VPS11-209ENST00000622309 C10orf90Q96M02 699 aa7.66□□□□□ -1.18
VPS11-209ENST00000622309 SNRNP25Q9BV90 132 aaKnown RBP7.66□□□□□ -1.18
VPS11-209ENST00000622309 CINPQ9BW66 212 aaPredicted RBP7.66□□□□□ -1.18
VPS11-209ENST00000622309 ZCCHC4Q9H5U6 513 aa7.66□□□□□ -1.18
VPS11-209ENST00000622309 MVB12BQ9H7P6 319 aa7.66□□□□□ -1.18
VPS11-209ENST00000622309 CARS2Q9HA77 564 aaKnown RBP7.66□□□□□ -1.18
VPS11-209ENST00000622309 UTS2RQ9UKP6 389 aa7.66□□□□□ -1.18
VPS11-209ENST00000622309 BTRCQ9Y297 605 aa7.66□□□□□ -1.18
VPS11-209ENST00000622309 A0A087X1B8 175 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 DNASE2O00115 360 aaPredicted RBP7.65□□□□□ -1.18
VPS11-209ENST00000622309 WRBO00258 174 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 LYRM1O43325 122 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 SEC22BO75396 215 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 SLC22A3O75751 556 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 MPC2O95563 127 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 CFDP00746 253 aaPredicted RBP7.65□□□□□ -1.18
VPS11-209ENST00000622309 LINC00032P0C843 101 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 RPS19P39019 145 aaKnown RBP7.65□□□□□ -1.18
VPS11-209ENST00000622309 POLR2JP52435 117 aaKnown RBP7.65□□□□□ -1.18
VPS11-209ENST00000622309 CAPZA1P52907 286 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 DIO3P55073 304 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 NKG7Q16617 165 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.65□□□□□ -1.18
VPS11-209ENST00000622309 LRRC66Q68CR7 880 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 RANBP10Q6VN20 620 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 DUSP18Q8NEJ0 188 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 CHURC1Q8WUH1 139 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 TWIST2Q8WVJ9 160 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 RELTQ969Z4 430 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 KIAA1191Q96A73 305 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 UPRTQ96BW1 309 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 CRELD1Q96HD1 420 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 LGMNQ99538 433 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 ZNF251Q9BRH9 671 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 PDCD10Q9BUL8 212 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 NUSAP1Q9BXS6 441 aaKnown RBP7.65□□□□□ -1.18
VPS11-209ENST00000622309 MYOZ2Q9NPC6 264 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 NDRG3Q9UGV2 375 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 B9A039 149 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 PDCD5O14737 125 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 HCN1O60741 890 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 WBP4O75554 376 aaKnown RBP7.65□□□□□ -1.18
VPS11-209ENST00000622309 MICAL2O94851 1124 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 EOMESO95936 686 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 LALBAP00709 142 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 STSP08842 583 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 C4BPBP20851 252 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 STOMP27105 288 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 MAPK1P28482 360 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 ICAM3P32942 547 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 SMSP52788 366 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 RPS7P62081 194 aaKnown RBP7.65□□□□□ -1.18
VPS11-209ENST00000622309 POU4F1Q01851 419 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 LGALS3BPQ08380 585 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 RCAN2Q14206 197 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 DMC1Q14565 340 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 GLYR1Q49A26 553 aaPredicted RBP7.65□□□□□ -1.18
VPS11-209ENST00000622309 ATP6AP1LQ52LC2 224 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 MZT2AQ6P582 158 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 CYHR1Q6ZMK1 362 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 DENND1CQ8IV53 801 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.65□□□□□ -1.18
VPS11-209ENST00000622309 BTN2A2Q8WVV5 523 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 NSMAFQ92636 917 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 HS6ST2Q96MM7 605 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 NUDT16L1Q9BRJ7 211 aaKnown RBP7.65□□□□□ -1.18
VPS11-209ENST00000622309 MARVELD1Q9BSK0 173 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 THUMPD3Q9BV44 507 aaKnown RBP7.65□□□□□ -1.18
VPS11-209ENST00000622309 NMUR1Q9HB89 426 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 EMC7Q9NPA0 242 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 NIT2Q9NQR4 276 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 SPASTQ9UBP0 616 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 GPN3Q9UHW5 284 aaPredicted RBP7.65□□□□□ -1.18
VPS11-209ENST00000622309 ZNF490Q9ULM2 529 aaPredicted RBP7.65□□□□□ -1.18
VPS11-209ENST00000622309 PPIEQ9UNP9 301 aaKnown RBP7.65□□□□□ -1.18
VPS11-209ENST00000622309 DNAJC15Q9Y5T4 150 aa7.65□□□□□ -1.18
VPS11-209ENST00000622309 MYO18AQ92614 2054 aaKnown RBP7.65□□□□□ -1.19
VPS11-209ENST00000622309 LOC102723532A0A0G2JNH3 316 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 SLC35F4A4IF30 521 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 TRABD2BA6NFA1 517 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 SLC28A1O00337 649 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 UBFD1O14562 309 aaKnown RBP7.65□□□□□ -1.19
VPS11-209ENST00000622309 CHP2O43745 196 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 PCDHGA12O60330 932 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 EIF1BO60739 113 aaKnown RBP7.65□□□□□ -1.19
VPS11-209ENST00000622309 GPX5O75715 221 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 KDM4BO94953 1096 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 PRAMEF1O95521 474 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 PTHP01270 115 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 HRGP04196 525 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 RAB3BP20337 219 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms