RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 CAPZBP47756 277 aa17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 ACADVLP49748 655 aa17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 GFERP55789 205 aa17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 PHEXP78562 749 aa17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 SLC25A3Q00325 362 aa17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 HERC3Q15034 1050 aa17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 VPS26BQ4G0F5 336 aa17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 FBXO42Q6P3S6 717 aa17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 FAM92BQ6ZTR7 304 aa17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 COMMD6Q7Z4G1 85 aa17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 HOMEZQ8IX15 550 aa17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 Q8N9G6 341 aaPredicted RBP17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 CDC26Q8NHZ8 85 aa17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 GFM2Q969S9 779 aaKnown RBP17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 VPS33AQ96AX1 596 aa17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 KLHL31Q9H511 634 aa17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 NLGN3Q9NZ94 848 aa17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 PCDHGA4Q9Y5G9 962 aa17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 GPR179Q6PRD1 2367 aa17.78■□□□□ 0.44
SEMA6C-210ENST00000621728 A0A0G2JN53 185 aa17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 A0A0J9YVX5 310 aa17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 C4orf51C9J302 202 aa17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 EPN2O95208 641 aa17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 LRATO95237 230 aa17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 SNRPB2P08579 225 aaKnown RBP17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 PTX3P26022 381 aaPredicted RBP17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 MRPL19P49406 292 aaKnown RBP17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 SNRPNP63162 240 aaKnown RBP17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 MXRA7P84157 204 aa17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 SLC34A1Q06495 639 aa17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 HYAL2Q12891 473 aa17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 KPNB1Q14974 876 aaKnown RBP17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 KHDRBS2Q5VWX1 349 aaKnown RBP17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 ZC3H14Q6PJT7 736 aaKnown RBP17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 MFSD9Q8NBP5 474 aa17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 SERPINI1Q99574 410 aa17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 PITHD1Q9GZP4 211 aaPredicted RBP17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 SLC52A3Q9NQ40 469 aa17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 ZIM2Q9NZV7 527 aa17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 ANGPTL2Q9UKU9 493 aa17.77■□□□□ 0.44
SEMA6C-210ENST00000621728 LY6G6EA0A0G2JKS1 128 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 PLPP1O14494 284 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 HCRTR1O43613 425 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 SIGLEC6O43699 453 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 KLHL18O94889 574 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 HRH2P25021 359 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 CPOXP36551 454 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 PTDSS1P48651 473 aaKnown RBP17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 CCT8P50990 548 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 DGKQP52824 942 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 C10orf62Q5T681 223 aaPredicted RBP17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 DEPDC1Q5TB30 811 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 FRMPD2BQ6IN97 320 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 BLOC1S3Q6QNY0 202 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 VN1R4Q7Z5H5 301 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 EID2Q8N6I1 236 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 OR4C6Q8NH72 309 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 NCSTNQ92542 709 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 MAP3K3Q99759 626 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 PADI4Q9UM07 663 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 RUVBL1Q9Y265 456 aaKnown RBP17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 TMED5Q9Y3A6 229 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 AP1M2Q9Y6Q5 423 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 U3KQA8 63 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 RP1P56715 2156 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 ASPDHA6ND91 283 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 CAPN5O15484 640 aaPredicted RBP17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 NDUFS4O43181 175 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 PCDH7O60245 1069 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 FKBP6O75344 327 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 B3GALT4O96024 378 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 ENGP17813 658 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 NUDT2P50583 147 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 POLR2JP52435 117 aaKnown RBP17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 TAF11Q15544 211 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 AMZ1Q400G9 498 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 TIGD2Q4W5G0 525 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 SPIN4Q56A73 249 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 REP15Q6BDI9 236 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 ZCCHC8Q6NZY4 707 aaKnown RBP17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 UBE3DQ7Z6J8 389 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 RABEPKQ7Z6M1 372 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 RETREG3Q86VR2 466 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 ULK2Q8IYT8 1036 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 METTL4Q8N3J2 472 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 BAHD1Q8TBE0 780 aaPredicted RBP17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 N4BP2L2Q92802 583 aaPredicted RBP17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 TGM7Q96PF1 710 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 SARGQ9BW04 601 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 COL25A1Q9BXS0 654 aaPredicted RBP17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 ZNF717Q9BY31 904 aaPredicted RBP17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 DPY30Q9C005 99 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 FAM60AQ9NP50 221 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 LHX9Q9NQ69 397 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 KLHL3Q9UH77 587 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 ADGRE2Q9UHX3 823 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 PILRAQ9UKJ1 303 aa17.76■□□□□ 0.43
SEMA6C-210ENST00000621728 LOC105369274A0A096LPK9 316 aa17.75■□□□□ 0.43
SEMA6C-210ENST00000621728 LOC102723532A0A0G2JNH3 316 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms