RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 TAS2R9Q9NYW1 312 aa11.02□□□□□ -0.65
CLIP1-219ENST00000620786 RARRES3Q9UL19 164 aa11.02□□□□□ -0.65
CLIP1-219ENST00000620786 WBP11Q9Y2W2 641 aaKnown RBP11.02□□□□□ -0.65
CLIP1-219ENST00000620786 PCDHGB1Q9Y5G3 927 aa11.02□□□□□ -0.65
CLIP1-219ENST00000620786 TFECO14948 347 aaPredicted RBP11.01□□□□□ -0.65
CLIP1-219ENST00000620786 OR2B3O76000 313 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 SCGNO76038 276 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 CYP17A1P05093 508 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 CHRM5P08912 532 aaPredicted RBP11.01□□□□□ -0.65
CLIP1-219ENST00000620786 GSTM3P21266 225 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 CDK6Q00534 326 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.01□□□□□ -0.65
CLIP1-219ENST00000620786 LGI4Q8N135 537 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 THEM6Q8WUY1 208 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 TLR4O00206 839 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 EPCAMP16422 314 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 OTX2P32243 289 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 CARTPTQ16568 116 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 SLC2A7Q6PXP3 512 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 C2CD4AQ8NCU7 369 aaPredicted RBP11.01□□□□□ -0.65
CLIP1-219ENST00000620786 MYOCOSA0A1B0GUC4 107 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 TMEM233B4DJY2 109 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 OR1I1O60431 355 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 ITGA10O75578 1167 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 C6P13671 934 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 ANXA8P13928 327 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 RABIFP47224 123 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 FOXK1P85037 733 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 SPATC1Q76KD6 591 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 RPLP0P6Q8NHW5 317 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 NPIPA2E9PIF3 369 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 NPIPA3F8WFD2 350 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 CSTBP04080 98 aaKnown RBP11.01□□□□□ -0.65
CLIP1-219ENST00000620786 OR3A3P47888 321 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 OR3A2P47893 321 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 NTHL1P78549 312 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 PQLC3Q8N755 202 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 GATSQ8NAP1 163 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 TESCQ96BS2 214 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 LRRC58Q96CX6 371 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 SLC2A13Q96QE2 648 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 PHF12Q96QT6 1004 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 EBF4Q9BQW3 602 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 C14orf105Q9NVL8 296 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 PPP4R1LQ9P1A2 415 aa11.01□□□□□ -0.65
CLIP1-219ENST00000620786 LCHNA4D1U4 455 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 EFCAB9A8MZ26 197 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 SOX1O00570 391 aaPredicted RBP11□□□□□ -0.65
CLIP1-219ENST00000620786 SCO2O43819 266 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 LATS1O95835 1130 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 ASGR2P07307 311 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 EEFSECP57772 596 aaKnown RBP11□□□□□ -0.65
CLIP1-219ENST00000620786 ST3GAL3Q11203 375 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 SLC35G1Q2M3R5 365 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 FLYWCH1Q4VC44 716 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 ULK3Q6PHR2 472 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 CRTC1Q6UUV9 634 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 UTS2BQ765I0 119 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 NPAS3Q8IXF0 933 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 GPALPP1Q8IXQ4 340 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 APCDD1Q8J025 514 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 FBRSQ9HAH7 460 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 MS4A12Q9NXJ0 267 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 A0A1B0GVT2 93 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 AIREO43918 545 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 CNMDO75829 334 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 THEGLP0DJG4 465 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 ACSL1P33121 698 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 RAB33AQ14088 237 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 E2F2Q14209 437 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 LASP1Q14847 261 aaKnown RBP11□□□□□ -0.65
CLIP1-219ENST00000620786 SYT16Q17RD7 645 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 TMEM198Q66K66 360 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 PLEKHO2Q8TD55 490 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 KIAA1191Q96A73 305 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 CNDP2Q96KP4 475 aaKnown RBP11□□□□□ -0.65
CLIP1-219ENST00000620786 NODALQ96S42 347 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 RETREG1Q9H6L5 497 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 TAS2R7Q9NYW3 318 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 PLCL2Q9UPR0 1127 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 FAM72CH0Y354 149 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 DLX3O60479 287 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 CDC40O60508 579 aaKnown RBP eCLIP11□□□□□ -0.65
CLIP1-219ENST00000620786 HRH2P25021 359 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 FMO3P31513 532 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 OR12D2P58182 307 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 UFM1P61960 85 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 ADAM8P78325 824 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 PLCXD2Q0VAA5 305 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 DSC3Q14574 896 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 TGFBIQ15582 683 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 PDCD4Q53EL6 469 aaKnown RBP11□□□□□ -0.65
CLIP1-219ENST00000620786 FAM72AQ5TYM5 149 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 FAM72DQ6L9T8 149 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 SLC36A4Q6YBV0 504 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 RNF111Q6ZNA4 994 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 CCDC80Q76M96 950 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 DGLUCYQ7Z3D6 616 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 FAM72BQ86X60 149 aa11□□□□□ -0.65
CLIP1-219ENST00000620786 PLXDC1Q8IUK5 500 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms