RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 PTTG1O95997 202 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 ESR1P03372 595 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 SNRPD1P62314 119 aaKnown RBP6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 YBX1P67809 324 aaKnown RBP6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 CYP4F2P78329 520 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 PHC1P78364 1004 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF45Q02386 682 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 DHCR24Q15392 516 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 CPSF6Q16630 551 aaKnown RBP eCLIP6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 C2orf27AQ580R0 203 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 KIAA1614Q5VZ46 1190 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 ATG9BQ674R7 924 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 LETMD1Q6P1Q0 360 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 DLEU7Q6UYE1 221 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 SLC16A12Q6ZSM3 486 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 TRIM69Q86WT6 500 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 GATAD2AQ86YP4 633 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 KLHDC8BQ8IXV7 354 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 SPPL2AQ8TCT8 520 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 MRPL38Q96DV4 380 aaKnown RBP6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 DYRK4Q9NR20 520 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 GIMAP4Q9NUV9 329 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 NLE1Q9NVX2 485 aaPredicted RBP6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 ADPRHL2Q9NX46 363 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 DUSP12Q9UNI6 340 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 RNF6Q9Y252 685 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 PCDHB14Q9Y5E9 798 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 A0A1B0GTL3 188 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 FFAR2O15552 330 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ZW10O43264 779 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 JRKO75564 520 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 CCNDBP1O95273 360 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 HIST1H2AGP0C0S8 130 aaPredicted RBP6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ITGAMP11215 1152 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 HIST1H2ADP20671 130 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 TGM1P22735 817 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 DGKAP23743 735 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 NR4A2P43354 598 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 SUOXP51687 545 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ARPC4P59998 168 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 SEMA3AQ14563 771 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF77Q15935 545 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 RFTN2Q52LD8 501 aaPredicted RBP6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 FAM78AQ5JUQ0 283 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 SHQ1Q6PI26 577 aaKnown RBP6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 PRSS48Q7RTY5 328 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 B3GNT8Q7Z7M8 397 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 NPAS3Q8IXF0 933 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF557Q8N988 423 aaPredicted RBP6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF548Q8NEK5 533 aaPredicted RBP6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 CYB5D2Q8WUJ1 264 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 SORCS1Q8WY21 1168 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 NELL1Q92832 810 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 SMARCD2Q92925 531 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF486Q96H40 463 aaPredicted RBP6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 HIST1H2AHQ96KK5 128 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 PANX1Q96RD7 426 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 HIST1H2AJQ99878 128 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 CTRCQ99895 268 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 CHCHD6Q9BRQ6 235 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 H2AFJQ9BTM1 129 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 TPK1Q9H3S4 243 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 MARCH7Q9H992 704 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 TM9SF3Q9HD45 589 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 DCAF13Q9NV06 445 aaKnown RBP6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 DZANK1Q9NVP4 752 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 THG1LQ9NWX6 298 aaKnown RBP6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 CRLS1Q9UJA2 301 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 OR51B4Q9Y5P0 310 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 EFCAB10A6NFE3 127 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 FAM220BPB1ANY3 271 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ANKRD66B4E2M5 251 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ALG1L2C9J202 215 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 LINC01565O15544 149 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 LRATO95237 230 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ADH1CP00326 375 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ATXN1LP0C7T5 689 aaKnown RBP6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 GTF2E2P29084 291 aaKnown RBP6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 PTGER3P43115 390 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 INPP1P49441 399 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 OR2B6P58173 313 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 CXCR4P61073 352 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ST8SIA6P61647 398 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 RPS14P62263 151 aaKnown RBP6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 KCNC4Q03721 635 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ABHD18Q0P651 414 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ABRAXAS2Q15018 415 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ZC3H12BQ5HYM0 836 aaKnown RBP6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 DOK6Q6PKX4 331 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 KRT73Q86Y46 540 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 MMAAQ8IVH4 418 aaKnown RBP6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 FAM217AQ8IXS0 508 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 TDHQ8IZJ6 230 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 PJA1Q8NG27 643 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 PIK3R3Q92569 461 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 KCNJ9Q92806 393 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 OTUB2Q96DC9 234 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ALG14Q96F25 216 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 SHDQ96IW2 340 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 MIR1-1HGQ9H1L0 117 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms