RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 FOLR1P15328 257 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 STMN1P16949 149 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 ITGAXP20702 1163 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 BGNP21810 368 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 TYK2P29597 1187 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 SLC1A6P48664 564 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 RGS4P49798 205 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 AGTR2P50052 363 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 PNLIPRP1P54315 467 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 EMP3P54852 163 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 AQP5P55064 265 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 SNRPNP63162 240 aaKnown RBP5.03□□□□□ -1.6
SHMT1-211ENST00000618902 GALNT1Q10472 559 aaPredicted RBP5.03□□□□□ -1.6
SHMT1-211ENST00000618902 BST1Q10588 318 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 NAE1Q13564 534 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 CSHL1Q14406 222 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 CHI3L2Q15782 390 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 SLC5A12Q1EHB4 618 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 COL28A1Q2UY09 1125 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 FBXO48Q5FWF7 155 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 ZC3H12BQ5HYM0 836 aaKnown RBP5.03□□□□□ -1.6
SHMT1-211ENST00000618902 TCTE1Q5JU00 501 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 CFAP157Q5JU67 520 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 PRAMEF17Q5VTA0 474 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 CACHD1Q5VU97 1274 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 KIAA1614Q5VZ46 1190 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 FCRL6Q6DN72 434 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 PGM2L1Q6PCE3 622 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 SPESP1Q6UW49 350 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 C16orf89Q6UX73 402 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 C6orf15Q6UXA7 325 aaPredicted RBP5.03□□□□□ -1.6
SHMT1-211ENST00000618902 ZNF517Q6ZMY9 492 aaPredicted RBP5.03□□□□□ -1.6
SHMT1-211ENST00000618902 LRRC74BQ6ZQY2 392 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 CDHR3Q6ZTQ4 885 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 ISCA2Q86U28 154 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 FAM129CQ86XR2 697 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 MYLK4Q86YV6 388 aaPredicted RBP5.03□□□□□ -1.6
SHMT1-211ENST00000618902 MYO1HQ8N1T3 1032 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 AFAP1L2Q8N4X5 818 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 NKAPQ8N5F7 415 aaKnown RBP5.03□□□□□ -1.6
SHMT1-211ENST00000618902 IL22RA1Q8N6P7 574 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 OR2A1Q8NGT9 310 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 OR6Y1Q8NGX8 325 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 RFWD2Q8NHY2 731 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 RP9Q8TA86 221 aaKnown RBP5.03□□□□□ -1.6
SHMT1-211ENST00000618902 PROKR1Q8TCW9 393 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 ACTRT2Q8TDY3 377 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 USP7Q93009 1102 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 FBXL8Q96CD0 374 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 TSPAN17Q96FV3 270 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 CNDP1Q96KN2 507 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 ZNF570Q96NI8 536 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 OR4K3Q96R72 315 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 ATOH8Q96SQ7 321 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 CTRCQ99895 268 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 ACAT2Q9BWD1 397 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 SGPP1Q9BX95 441 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 ILKAPQ9H0C8 392 aaPredicted RBP5.03□□□□□ -1.6
SHMT1-211ENST00000618902 PCBD2Q9H0N5 130 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 ATG10Q9H0Y0 220 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 C12orf65Q9H3J6 166 aaKnown RBP5.03□□□□□ -1.6
SHMT1-211ENST00000618902 PARVBQ9HBI1 364 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 POPDC3Q9HBV1 291 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 VCX3AQ9NNX9 186 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 SLC6A20Q9NP91 592 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 C8orf4Q9NR00 106 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 ARL8BQ9NVJ2 186 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 CUEDC1Q9NWM3 386 aaPredicted RBP5.03□□□□□ -1.6
SHMT1-211ENST00000618902 FOXJ2Q9P0K8 574 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 SPATA7Q9P0W8 599 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 ANKMY1Q9P2S6 941 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 SLC17A7Q9P2U7 560 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 PISDQ9UG56 409 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 TLK1Q9UKI8 766 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 CNOT11Q9UKZ1 510 aaKnown RBP5.03□□□□□ -1.6
SHMT1-211ENST00000618902 RARRES3Q9UL19 164 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 EMCNQ9ULC0 261 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 SRPK3Q9UPE1 567 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 PCDHGB7Q9Y5F8 929 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 RELNP78509 3460 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 CENPEQ02224 2701 aa5.03□□□□□ -1.6
SHMT1-211ENST00000618902 A0A096LPK6 155 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 A0A0J9YY10 115 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 SMIM31A0A1B0GVY4 71 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 PIPSLA2A3N6 862 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 WDR91A4D1P6 747 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 SYNDIG1LA6NDD5 238 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 TRPC5OSA6NMA1 111 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 EFCAB7A8K855 629 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 ISM1B1AKI9 464 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 H3BMH7 237 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 GOLGA8RI6L899 631 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 UBXN8O00124 270 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 CDK2AP1O14519 115 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 PLIN3O60664 434 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 CTSVO60911 334 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 CPNE3O75131 537 aaKnown RBP5.02□□□□□ -1.61
SHMT1-211ENST00000618902 STK17BO94768 372 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 CCNDBP1O95273 360 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 MED26O95402 600 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms