RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 SNX20Q7Z614 316 aa16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 DENND1AQ8TEH3 1009 aa16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 LINC00615Q96LM1 132 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 PLCD4Q9BRC7 762 aa16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 ENKD1Q9H0I2 346 aa16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 ZNF160Q9HCG1 818 aa16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 PTGFRNQ9P2B2 879 aa16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 CCDC162PA2VCL2 907 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 RASAL1O95294 804 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 ALBP02768 609 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 CACNG1Q06432 222 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 PRKG2Q13237 762 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 BCL7AQ4VC05 210 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 UGT3A1Q6NUS8 523 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 TTLL10Q6ZVT0 673 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 COX15Q7KZN9 410 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 TAS2R42Q7RTR8 314 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 SERPINA9Q86WD7 417 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 DENND6AQ8IWF6 608 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 ACBD4Q8NC06 268 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 DNAJB8Q8NHS0 232 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 FAM111AQ96PZ2 611 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 OR2A14Q96R47 310 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 HGH1Q9BTY7 390 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 CHRNA10Q9GZZ6 450 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 POPDC3Q9HBV1 291 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 MTO1Q9Y2Z2 717 aaKnown RBP16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 PCDHGB6Q9Y5F9 930 aa16.74■□□□□ 0.27
TRAPPC3-209ENST00000616395 C17orf113A0A1B0GUU1 675 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 AGAP14A8MT82 685 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 FOXO6A8MYZ6 492 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 H2AFYO75367 372 aaKnown RBP16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 HPP00738 406 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 ALDOAP04075 364 aaKnown RBP16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 SAT1P21673 171 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 ARNTP27540 789 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 SLC26A3P40879 764 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 PRKAA2P54646 552 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 MPP1Q00013 466 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 SLC5A12Q1EHB4 618 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 FAM83EQ2M2I3 478 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 GPR33Q49SQ1 333 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 RGS9BPQ6ZS82 235 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 NCCRP1Q6ZVX7 275 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 DNAJC22Q8N4W6 341 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 RDH11Q8TC12 318 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 HM13Q8TCT9 377 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 PSMF1Q92530 271 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 HAS2Q92819 552 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 ULK4Q96C45 1275 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 VPS50Q96JG6 964 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 CCT8L2Q96SF2 557 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 COPS8Q99627 209 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 SLC26A1Q9H2B4 701 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 FBXO6Q9NRD1 293 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 SLC17A6Q9P2U8 582 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 CTSFQ9UBX1 484 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 PLCL2Q9UPR0 1127 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 NCOA6Q14686 2063 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 ANKRD12Q6UB98 2062 aa16.73■□□□□ 0.27
TRAPPC3-209ENST00000616395 TRBV5-4A0A0C4DH59 114 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 A0A1B0GX78 115 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 ACRV1P26436 265 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 FOXN2P32314 431 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 SOX11P35716 441 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 MAGEA12P43365 314 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 GCGRP47871 477 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 TYSND1Q2T9J0 566 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 SH2D5Q6ZV89 423 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 NUDCD3Q8IVD9 361 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 KBTBD2Q8IY47 623 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 CLDN19Q8N6F1 224 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 DLG3Q92796 817 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 DCUN1D1Q96GG9 259 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 FAM107BQ9H098 131 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 OR52A5Q9H2C5 316 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 MVB12BQ9H7P6 319 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 SPHK1Q9NYA1 384 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 ZDHHC3Q9NYG2 299 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 ICKQ9UPZ9 632 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 VWA7Q9Y334 891 aa16.72■□□□□ 0.27
TRAPPC3-209ENST00000616395 HMX2A2RU54 273 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 FAM221AA4D161 298 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 H3BMM5 538 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 IFRD1O00458 451 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 EBAG9O00559 213 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 HAUS5O94927 633 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 ONECUT2O95948 504 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 S1PR4O95977 384 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 C2P06681 752 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 TROVE2P10155 538 aaKnown RBP eCLIP16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 PIM1P11309 404 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 WDR4P57081 412 aaKnown RBP16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 PMP22Q01453 160 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 MPP2Q14168 576 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 SEMA3AQ14563 771 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 GLIPR1L2Q4G1C9 344 aa16.71■□□□□ 0.27
TRAPPC3-209ENST00000616395 SIRT6Q8N6T7 355 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms