RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	BEST3	Q8N1M1	668 aa		10.48	□□□□□ -0.73
CBWD1-222	ENST00000613508	MYO1H	Q8N1T3	1032 aa		10.48	□□□□□ -0.73
CBWD1-222	ENST00000613508	ZNF808	Q8N4W9	903 aa	Predicted RBP	10.48	□□□□□ -0.73
CBWD1-222	ENST00000613508	SLC5A8	Q8N695	610 aa		10.48	□□□□□ -0.73
CBWD1-222	ENST00000613508	AMER2	Q8N7J2	671 aa		10.48	□□□□□ -0.73
CBWD1-222	ENST00000613508	SLCO2A1	Q92959	643 aa		10.48	□□□□□ -0.73
CBWD1-222	ENST00000613508	SCMH1	Q96GD3	660 aa		10.48	□□□□□ -0.73
CBWD1-222	ENST00000613508	CCDC120	Q96HB5	630 aa		10.48	□□□□□ -0.73
CBWD1-222	ENST00000613508	PDLIM5	Q96HC4	596 aa	Known RBP	10.48	□□□□□ -0.73
CBWD1-222	ENST00000613508	NDN	Q99608	321 aa		10.48	□□□□□ -0.73
CBWD1-222	ENST00000613508	LPAR4	Q99677	370 aa		10.48	□□□□□ -0.73
CBWD1-222	ENST00000613508	NPAS2	Q99743	824 aa		10.48	□□□□□ -0.73
CBWD1-222	ENST00000613508	ATG10	Q9H0Y0	220 aa		10.48	□□□□□ -0.73
CBWD1-222	ENST00000613508	CORO1C	Q9ULV4	474 aa	Predicted RBP	10.48	□□□□□ -0.73
CBWD1-222	ENST00000613508	ZNF835	Q9Y2P0	537 aa		10.48	□□□□□ -0.73
CBWD1-222	ENST00000613508	NAALAD2	Q9Y3Q0	740 aa		10.48	□□□□□ -0.73
CBWD1-222	ENST00000613508	SCN2A	Q99250	2005 aa		10.48	□□□□□ -0.73
CBWD1-222	ENST00000613508	TRGV8	A0A0C4DH27	118 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	FEZF1	A0PJY2	475 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	ARHGAP10	A1A4S6	786 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	OR2W5	A6NFC9	320 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	CCL21	O00585	134 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	SLC19A2	O60779	497 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	MLYCD	O95822	493 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	FH	P07954	510 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	ENO2	P09104	434 aa	Predicted RBP	10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	HIST1H2AD	P20671	130 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	PTGER4	P35408	488 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	CD96	P40200	585 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	MEF2A	Q02078	507 aa	Predicted RBP	10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	USP10	Q14694	798 aa	Known RBP	10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	ZNF630	Q2M218	657 aa	Predicted RBP	10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	SFT2D3	Q587I9	215 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	RBM20	Q5T481	1227 aa	Known RBP	10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	MFSD4B	Q5TF39	518 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	PAPD4	Q6PIY7	484 aa	Known RBP	10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	XKRX	Q6PP77	449 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	BNC2	Q6ZN30	1099 aa	Predicted RBP	10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508		Q6ZPB1	254 aa	Predicted RBP	10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	MRGPRG	Q86SM5	289 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	CRLF3	Q8IUI8	442 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	ARMC10	Q8N2F6	343 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	HORMAD2	Q8N7B1	307 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	ZNF740	Q8NDX6	193 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	ZCCHC10	Q8TBK6	192 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	ELP5	Q8TE02	316 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	ATL1	Q8WXF7	558 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	TBC1D20	Q96BZ9	403 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	FBXL8	Q96CD0	374 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	LINGO1	Q96FE5	620 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	SNF8	Q96H20	258 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	HIST1H2AH	Q96KK5	128 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	SIGLEC12	Q96PQ1	595 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	OR4K3	Q96R72	315 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	HIST1H2AJ	Q99878	128 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	UTP23	Q9BRU9	249 aa	Known RBP	10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	H2AFJ	Q9BTM1	129 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	KCNK13	Q9HB14	408 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	PLAC1	Q9HBJ0	212 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	CHST11	Q9NPF2	352 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	ARL15	Q9NXU5	204 aa		10.47	□□□□□ -0.73
CBWD1-222	ENST00000613508	TEP1	Q99973	2627 aa	Known RBP	10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	GOLGA6L10	A0A0M3HER8	536 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	TTI1	O43156	1089 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	NDUFS4	O43181	175 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	NRDC	O43847	1150 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	NEURL1	O76050	574 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	WISP2	O76076	250 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	CD46	P15529	392 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	ALOX12	P18054	663 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	JAK1	P23458	1154 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	ELAVL4	P26378	380 aa	Known RBP	10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	IVD	P26440	423 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	AHR	P35869	848 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	CASP6	P55212	293 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	SLC26A5	P58743	744 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	PMP22	Q01453	160 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	FRG1	Q14331	258 aa	Known RBP	10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	OR1C1	Q15619	314 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	MSS51	Q4VC12	460 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	TEDDM1	Q5T9Z0	273 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	FCRLB	Q6BAA4	426 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	SIAH3	Q8IW03	269 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	MCEMP1	Q8IX19	187 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	TBC1D19	Q8N5T2	526 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	TMEM178A	Q8NBL3	297 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	NT5C	Q8TCD5	201 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	ANKRD7	Q92527	254 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	MOCOS	Q96EN8	888 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	CERS2	Q96G23	380 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	PEX11G	Q96HA9	241 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	GPR137	Q96N19	417 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	FRMD6	Q96NE9	622 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	OSBPL9	Q96SU4	736 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	TRIM54	Q9BYV2	358 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	UNK	Q9C0B0	810 aa	Known RBP	10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	TRIM45	Q9H8W5	580 aa	Predicted RBP	10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	ZFP69B	Q9UJL9	534 aa		10.46	□□□□□ -0.73
CBWD1-222	ENST00000613508	MYO7B	Q6PIF6	2116 aa		10.46	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms