RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 SELENOMQ8WWX9 145 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 ACPTQ9BZG2 426 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 NECTIN3Q9NQS3 549 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 SLC28A1O00337 649 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 CST1P01037 141 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 SRPRAP08240 638 aaKnown RBP15.9■□□□□ 0.14
CNOT3-208ENST00000613073 CYP2A7P20853 494 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 MASP1P48740 699 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 CLK1P49759 484 aaKnown RBP15.9■□□□□ 0.14
CNOT3-208ENST00000613073 DCDC1P59894 354 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 ISL1P61371 349 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 SIM2Q14190 667 aaPredicted RBP15.9■□□□□ 0.14
CNOT3-208ENST00000613073 FAM174BQ3ZCQ3 159 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 SUSD1Q6UWL2 747 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 MICU2Q8IYU8 434 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 SVOPQ8N4V2 548 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 TCF20Q9UGU0 1960 aaKnown RBP15.9■□□□□ 0.14
CNOT3-208ENST00000613073 TSPAN11A1L157 253 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 GFYI3L273 518 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 MITFO75030 526 aaPredicted RBP15.89■□□□□ 0.13
CNOT3-208ENST00000613073 GABARAPL2P60520 117 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 RAPSNQ13702 412 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 CLCA4Q14CN2 919 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 SMN1Q16637 294 aaKnown RBP15.89■□□□□ 0.13
CNOT3-208ENST00000613073 CCSMST1Q4G0I0 132 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 SYTL3Q4VX76 610 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 DLEU7Q6UYE1 221 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 TRIM46Q7Z4K8 759 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 PTRH1Q86Y79 214 aaKnown RBP15.89■□□□□ 0.13
CNOT3-208ENST00000613073 NPAS3Q8IXF0 933 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 CADM2Q8N3J6 435 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 OR10Q1Q8NGQ4 319 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 GLYATL1Q969I3 302 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 AURKBQ96GD4 344 aaPredicted RBP15.89■□□□□ 0.13
CNOT3-208ENST00000613073 DCSTAMPQ9H295 470 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 ELOVL6Q9H5J4 265 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 PAQR5Q9NXK6 330 aaPredicted RBP15.89■□□□□ 0.13
CNOT3-208ENST00000613073 K7ESM1 405 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 PRAMEF4O60810 478 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 KRT6AP02538 564 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 MT-ND2P03891 347 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 KRT6BP04259 564 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 LCKP06239 509 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 CD6P30203 668 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 IFNA8P32881 189 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 KRT6CP48668 564 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 GALK2Q01415 458 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 TMEM115Q12893 351 aaPredicted RBP15.89■□□□□ 0.13
CNOT3-208ENST00000613073 SMU1Q2TAY7 513 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 ZFP69Q49AA0 526 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 PRAMEF9Q5VWM5 478 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 NXNL2Q5VZ03 156 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 GALNT12Q8IXK2 581 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 FGF13Q92913 245 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 USP7Q93009 1102 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 DPY30Q9C005 99 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 SNX6Q9UNH7 406 aa15.89■□□□□ 0.13
CNOT3-208ENST00000613073 LINC00854A0A1B0GVQ3 168 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 WNT9AO14904 365 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 ALX3O95076 343 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 RB1P06400 928 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 MPC1LP0DKB6 136 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 NKG7Q16617 165 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 FAM98BQ52LJ0 330 aaKnown RBP15.88■□□□□ 0.13
CNOT3-208ENST00000613073 SPANXN4Q5MJ08 99 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 GET4Q7L5D6 327 aaPredicted RBP15.88■□□□□ 0.13
CNOT3-208ENST00000613073 LRRC70Q7Z2Q7 622 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 HID1Q8IV36 788 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 ETFBKMTQ8IXQ9 262 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 SH3GL1Q99961 368 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 DEC1Q9P2X7 70 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 PCDHGA10Q9Y5H3 936 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 LOC105371267A0A1B0GV96 52 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 EFCAB9A8MZ26 197 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 DNTTP04053 509 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 CD36P16671 472 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 PDHA2P29803 388 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 SLC6A12P48065 614 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 ST13P50502 369 aaKnown RBP15.88■□□□□ 0.13
CNOT3-208ENST00000613073 OR2B6P58173 313 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 GNG2P59768 71 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 CDK5R2Q13319 367 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.88■□□□□ 0.13
CNOT3-208ENST00000613073 CACHD1Q5VU97 1274 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 AGAP6Q5VW22 663 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 TMEM220Q6QAJ8 160 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 BPHLQ86WA6 291 aaPredicted RBP15.88■□□□□ 0.13
CNOT3-208ENST00000613073 OR6F1Q8NGZ6 308 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 HCAR2Q8TDS4 363 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 TMEM159Q96B96 161 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 YIPF6Q96EC8 236 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 MED8Q96G25 268 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 AGAP4Q96P64 663 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 MTIF3Q9H2K0 278 aaKnown RBP15.88■□□□□ 0.13
CNOT3-208ENST00000613073 C14orf119Q9NWQ9 140 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 C1orf109Q9NX04 203 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 DPP7Q9UHL4 492 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 DLGAP4Q9Y2H0 992 aa15.88■□□□□ 0.13
CNOT3-208ENST00000613073 HEPACAM2A8MVW5 462 aa15.87■□□□□ 0.13
CNOT3-208ENST00000613073 ARHGEF33A8MVX0 844 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms