RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 LIX1Q8N485 282 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 TCTN2Q96GX1 697 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 NUDT22Q9BRQ3 303 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 EBPLQ9BY08 206 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 FAM60AQ9NP50 221 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 MRGBPQ9NV56 204 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 ATXN7L1Q9ULK2 861 aaPredicted RBP16.76■□□□□ 0.27
SREK1-216ENST00000612404 RUVBL1Q9Y265 456 aaKnown RBP16.76■□□□□ 0.27
SREK1-216ENST00000612404 DLGAP4Q9Y2H0 992 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 GPR45Q9Y5Y3 372 aa16.76■□□□□ 0.27
SREK1-216ENST00000612404 ASCC3Q8N3C0 2202 aaKnown RBP16.76■□□□□ 0.27
SREK1-216ENST00000612404 LOC105369274A0A096LPK9 316 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 LOC102723532A0A0G2JNH3 316 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 EIF2S1P05198 315 aaKnown RBP16.75■□□□□ 0.27
SREK1-216ENST00000612404 BCKDHAP12694 445 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 PIK3R1P27986 724 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 HNRNPH1P31943 449 aaKnown RBP16.75■□□□□ 0.27
SREK1-216ENST00000612404 ATP4BP51164 291 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 RELAQ04206 551 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 PAOXQ6QHF9 649 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 CYP20A1Q6UW02 462 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 RNF44Q7L0R7 432 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 COMMD6Q7Z4G1 85 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 VN1R4Q7Z5H5 301 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 OR4N4Q8N0Y3 316 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 CHTF18Q8WVB6 975 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 SLC45A3Q96JT2 553 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 REXO4Q9GZR2 422 aaKnown RBP16.75■□□□□ 0.27
SREK1-216ENST00000612404 SDR39U1Q9NRG7 319 aaPredicted RBP16.75■□□□□ 0.27
SREK1-216ENST00000612404 ARL8BQ9NVJ2 186 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 BAIAP2L1Q9UHR4 511 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 LRIT2A6NDA9 550 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 A8MU76 341 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 MAP3K7O43318 606 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 SH3BP5O60239 455 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 KIAA0754O94854 1291 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 CBX6O95503 412 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 SLC35G6P0C7Q6 338 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 NBL1P41271 181 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 MLLT3P42568 568 aaPredicted RBP16.75■□□□□ 0.27
SREK1-216ENST00000612404 SLC14A1Q13336 389 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 CSRP2Q16527 193 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 DEFB110Q30KQ9 67 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 AGKQ53H12 422 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 FAM91A1Q658Y4 838 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 OR9I1Q8NGQ6 314 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 THAP11Q96EK4 314 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 METTL2AQ96IZ6 378 aaKnown RBP16.75■□□□□ 0.27
SREK1-216ENST00000612404 BRINP2Q9C0B6 783 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 AHSPQ9NZD4 102 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 CCDC167Q9P0B6 97 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 FTSJ1Q9UET6 329 aa16.75■□□□□ 0.27
SREK1-216ENST00000612404 GNG14A0A1W2PPG7 69 aa16.74■□□□□ 0.27
SREK1-216ENST00000612404 H0YGG7 62 aa16.74■□□□□ 0.27
SREK1-216ENST00000612404 ZBTB11O95625 1053 aaPredicted RBP16.74■□□□□ 0.27
SREK1-216ENST00000612404 C9P02748 559 aa16.74■□□□□ 0.27
SREK1-216ENST00000612404 GBAP04062 536 aa16.74■□□□□ 0.27
SREK1-216ENST00000612404 GPX3P22352 226 aa16.74■□□□□ 0.27
SREK1-216ENST00000612404 ARL4DP49703 201 aa16.74■□□□□ 0.27
SREK1-216ENST00000612404 SEPHS1P49903 392 aa16.74■□□□□ 0.27
SREK1-216ENST00000612404 PLA2G16P53816 162 aa16.74■□□□□ 0.27
SREK1-216ENST00000612404 ARF3P61204 181 aaPredicted RBP16.74■□□□□ 0.27
SREK1-216ENST00000612404 RGS1Q08116 209 aa16.74■□□□□ 0.27
SREK1-216ENST00000612404 PTGR1Q14914 329 aa16.74■□□□□ 0.27
SREK1-216ENST00000612404 AASDHQ4L235 1098 aaPredicted RBP16.74■□□□□ 0.27
SREK1-216ENST00000612404 TOR1AIP1Q5JTV8 583 aa16.74■□□□□ 0.27
SREK1-216ENST00000612404 PARP9Q8IXQ6 854 aa16.74■□□□□ 0.27
SREK1-216ENST00000612404 POU5F2Q8N7G0 328 aa16.74■□□□□ 0.27
SREK1-216ENST00000612404 CLHC1Q8NHS4 586 aa16.74■□□□□ 0.27
SREK1-216ENST00000612404 WDR48Q8TAF3 677 aa16.74■□□□□ 0.27
SREK1-216ENST00000612404 RGMAQ96B86 450 aa16.74■□□□□ 0.27
SREK1-216ENST00000612404 SORBS1Q9BX66 1292 aaKnown RBP16.74■□□□□ 0.27
SREK1-216ENST00000612404 LRRN3Q9H3W5 708 aa16.74■□□□□ 0.27
SREK1-216ENST00000612404 KLHL31Q9H511 634 aa16.74■□□□□ 0.27
SREK1-216ENST00000612404 PARD6AQ9NPB6 346 aa16.74■□□□□ 0.27
SREK1-216ENST00000612404 MN1Q10571 1320 aaPredicted RBP16.74■□□□□ 0.27
SREK1-216ENST00000612404 ZFHX2Q9C0A1 2572 aaPredicted RBP16.73■□□□□ 0.27
SREK1-216ENST00000612404 LOC100653049A0A140TA62 436 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 A0A1W2PQM1 296 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 RTCAO00442 366 aaKnown RBP16.73■□□□□ 0.27
SREK1-216ENST00000612404 PLPP1O14494 284 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 SLC22A2O15244 555 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 PCDH7O60245 1069 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 KRT34O76011 436 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 CD59P13987 128 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 CD1EP15812 388 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 CKMT2P17540 419 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 ADSLP30566 484 aaPredicted RBP16.73■□□□□ 0.27
SREK1-216ENST00000612404 VSX2P58304 361 aaPredicted RBP16.73■□□□□ 0.27
SREK1-216ENST00000612404 UFM1P61960 85 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 KRT72Q14CN4 511 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 PDCD4Q53EL6 469 aaKnown RBP16.73■□□□□ 0.27
SREK1-216ENST00000612404 ZC3H12BQ5HYM0 836 aaKnown RBP16.73■□□□□ 0.27
SREK1-216ENST00000612404 METTL4Q8N3J2 472 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 CAMKVQ8NCB2 501 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 CDC26Q8NHZ8 85 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 TSSK3Q96PN8 268 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 C17orf62Q9BQA9 187 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 PDE7BQ9NP56 450 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 ASIC5Q9NY37 505 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms