RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 H3F3CQ6NXT2 135 aa12.95□□□□□ -0.34
LINC00116-203ENST00000611969 CD163Q86VB7 1156 aa12.95□□□□□ -0.34
LINC00116-203ENST00000611969 ARHGEF39Q8N4T4 335 aa12.95□□□□□ -0.34
LINC00116-203ENST00000611969 CPSF7Q8N684 471 aaKnown RBP12.95□□□□□ -0.34
LINC00116-203ENST00000611969 ANP32BQ92688 251 aaKnown RBP12.95□□□□□ -0.34
LINC00116-203ENST00000611969 KCNJ9Q92806 393 aa12.95□□□□□ -0.34
LINC00116-203ENST00000611969 ZNF669Q96BR6 464 aaPredicted RBP12.95□□□□□ -0.34
LINC00116-203ENST00000611969 MMABQ96EY8 250 aaPredicted RBP12.95□□□□□ -0.34
LINC00116-203ENST00000611969 SMR3AQ99954 134 aa12.95□□□□□ -0.34
LINC00116-203ENST00000611969 ZFYVE21Q9BQ24 234 aa12.95□□□□□ -0.34
LINC00116-203ENST00000611969 UTP23Q9BRU9 249 aaKnown RBP12.95□□□□□ -0.34
LINC00116-203ENST00000611969 VN1R1Q9GZP7 353 aa12.95□□□□□ -0.34
LINC00116-203ENST00000611969 C20orf96Q9NUD7 363 aaPredicted RBP12.95□□□□□ -0.34
LINC00116-203ENST00000611969 KCNN3Q9UGI6 736 aa12.95□□□□□ -0.34
LINC00116-203ENST00000611969 RNF6Q9Y252 685 aa12.95□□□□□ -0.34
LINC00116-203ENST00000611969 DHRS7Q9Y394 339 aa12.95□□□□□ -0.34
LINC00116-203ENST00000611969 MAD1L1Q9Y6D9 718 aa12.95□□□□□ -0.34
LINC00116-203ENST00000611969 VPS13CQ709C8 3753 aa12.95□□□□□ -0.34
LINC00116-203ENST00000611969 OR2A25A4D2G3 310 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 GOLGA8MH3BSY2 632 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 MYO1CO00159 1063 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 SMAPO00193 183 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 ZBTB14O43829 449 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 NEURL1O76050 574 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 ZWINTO95229 277 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 CCNDBP1O95273 360 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 MPC1LP0DKB6 136 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 ERGP11308 486 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 CD46P15529 392 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 CLCN7P51798 805 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 EMP3P54852 163 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 ABATP80404 500 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 LTBQ06643 244 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 PTK6Q13882 451 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 ACSBG2Q5FVE4 666 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 ZNF468Q5VIY5 522 aaPredicted RBP12.94□□□□□ -0.34
LINC00116-203ENST00000611969 LRRC8EQ6NSJ5 796 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 FBXO42Q6P3S6 717 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 CCDC71Q8IV32 467 aaPredicted RBP12.94□□□□□ -0.34
LINC00116-203ENST00000611969 CSNK1A1LQ8N752 337 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 TMEM178AQ8NBL3 297 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 ASB11Q8WXH4 323 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 SLCO2A1Q92959 643 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 NINJ1Q92982 152 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 MVB12AQ96EY5 273 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 ZNF354BQ96LW1 612 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 RUNDC3BQ96NL0 473 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 FAM167BQ9BTA0 163 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 KCNK13Q9HB14 408 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 ST6GALNAC2Q9UJ37 374 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 FBXO5Q9UKT4 447 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 CDC14AQ9UNH5 594 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 SCN3AQ9NY46 2000 aa12.94□□□□□ -0.34
LINC00116-203ENST00000611969 FN1P02751 2386 aaKnown RBP12.94□□□□□ -0.34
LINC00116-203ENST00000611969 OR2W5A6NFC9 320 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 GABRR3A8MPY1 467 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 GFYI3L273 518 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 TXNDC9O14530 226 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 P2RX6O15547 441 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 PRPF4O43172 522 aaKnown RBP eCLIP12.93□□□□□ -0.34
LINC00116-203ENST00000611969 VPS26AO75436 327 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 TPOP07202 933 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 SP1P08047 785 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 ANXA5P08758 320 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 HOXD4P09016 255 aaPredicted RBP12.93□□□□□ -0.34
LINC00116-203ENST00000611969 PGAM1P18669 254 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 CHRNB4P30926 498 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 RPA3P35244 121 aaPredicted RBP12.93□□□□□ -0.34
LINC00116-203ENST00000611969 PRDX1Q06830 199 aaKnown RBP12.93□□□□□ -0.34
LINC00116-203ENST00000611969 CTBP1Q13363 440 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 SYDE1Q6ZW31 735 aaPredicted RBP12.93□□□□□ -0.34
LINC00116-203ENST00000611969 CPEB2Q7Z5Q1 589 aaKnown RBP12.93□□□□□ -0.34
LINC00116-203ENST00000611969 DENND6AQ8IWF6 608 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 LILRB4Q8NHJ6 448 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 FAM57AQ8TBR7 257 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 MDFIQ99750 246 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 EBNA1BP2Q99848 306 aaKnown RBP12.93□□□□□ -0.34
LINC00116-203ENST00000611969 DPH7Q9BTV6 452 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 ACAT2Q9BWD1 397 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 ZNF358Q9NW07 568 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 DNAJB12Q9NXW2 375 aaKnown RBP12.93□□□□□ -0.34
LINC00116-203ENST00000611969 PCYOX1Q9UHG3 505 aa12.93□□□□□ -0.34
LINC00116-203ENST00000611969 IGKV1-8A0A0C4DH67 115 aa12.92□□□□□ -0.34
LINC00116-203ENST00000611969 A0A1B0GTH9 108 aa12.92□□□□□ -0.34
LINC00116-203ENST00000611969 ARHGEF33A8MVX0 844 aa12.92□□□□□ -0.34
LINC00116-203ENST00000611969 DNALI1O14645 258 aaPredicted RBP12.92□□□□□ -0.34
LINC00116-203ENST00000611969 HRH2P25021 359 aa12.92□□□□□ -0.34
LINC00116-203ENST00000611969 RFC3P40938 356 aa12.92□□□□□ -0.34
LINC00116-203ENST00000611969 PNLIPRP1P54315 467 aa12.92□□□□□ -0.34
LINC00116-203ENST00000611969 OC90Q02509 493 aaPredicted RBP12.92□□□□□ -0.34
LINC00116-203ENST00000611969 MEP1AQ16819 746 aa12.92□□□□□ -0.34
LINC00116-203ENST00000611969 HSP90AA5PQ58FG0 334 aa12.92□□□□□ -0.34
LINC00116-203ENST00000611969 SPANXN3Q5MJ09 141 aa12.92□□□□□ -0.34
LINC00116-203ENST00000611969 RNASEH2BQ5TBB1 312 aaKnown RBP12.92□□□□□ -0.34
LINC00116-203ENST00000611969 CES4AQ5XG92 561 aa12.92□□□□□ -0.34
LINC00116-203ENST00000611969 CYHR1Q6ZMK1 362 aa12.92□□□□□ -0.34
LINC00116-203ENST00000611969 KIAA0408Q6ZU52 694 aa12.92□□□□□ -0.34
LINC00116-203ENST00000611969 EID3Q8N140 333 aa12.92□□□□□ -0.34
LINC00116-203ENST00000611969 FAM98AQ8NCA5 519 aaKnown RBP12.92□□□□□ -0.34
LINC00116-203ENST00000611969 MCOLN3Q8TDD5 553 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms