RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 BTN3A3O00478 584 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 REM1O75628 298 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 MED26O95402 600 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 IGLV3-25P01717 112 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 T-ENOLP0DO92 83 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 TIA1P31483 386 aaKnown RBP eCLIP7.02□□□□□ -1.296e-10■■■■□ 20.6
CSDE1-218ENST00000610726 CAPGP40121 348 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 SUOXP51687 545 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 VSX2P58304 361 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-218ENST00000610726 MERTKQ12866 999 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 DAG1Q14118 895 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 SPANXN2Q5MJ10 180 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 MLIPQ5VWP3 458 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 ZNF544Q6NX49 715 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 ZNF852Q6ZMS4 543 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 RTL4Q6ZR62 310 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 GALNT10Q86SR1 603 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 IQCHQ86VS3 1027 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 AMIGO1Q86WK6 493 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 ZNF248Q8NDW4 579 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 ZHX1-C8orf76Q96EF9 292 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 DTD2Q96FN9 168 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 APIPQ96GX9 242 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 ZSWIM3Q96MP5 696 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 TRIB3Q96RU7 358 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 APOBEC3BQ9UH17 382 aaKnown RBP7.02□□□□□ -1.29
CSDE1-218ENST00000610726 MRTO4Q9UKD2 239 aaKnown RBP7.02□□□□□ -1.29
CSDE1-218ENST00000610726 SBF2Q86WG5 1849 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 KIAA1217Q5T5P2 1943 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 DUXAA6NLW8 204 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 ARHGEF33A8MVX0 844 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 CLIC3O95833 236 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 CHRM5P08912 532 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-218ENST00000610726 ALOX12P18054 663 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 TPP2P29144 1249 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-218ENST00000610726 OR1E2P47887 323 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 ATP4BP51164 291 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 CSNK2BP67870 215 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 CTSL3PQ5NE16 218 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.02□□□□□ -1.29
CSDE1-218ENST00000610726 NXPE4Q6UWF7 544 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 USP53Q70EK8 1073 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 ADGRG6Q86SQ4 1221 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 SVOPLQ8N434 492 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 OR5K1Q8NHB7 308 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 C3orf30Q96M34 536 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 SLC30A3Q99726 388 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 POLR2J3Q9H1A7 115 aaKnown RBP7.02□□□□□ -1.29
CSDE1-218ENST00000610726 C8orf33Q9H7E9 229 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-218ENST00000610726 CCNB1IP1Q9NPC3 277 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 C8orf4Q9NR00 106 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 PTGFRNQ9P2B2 879 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 P2RX2Q9UBL9 471 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 RSL24D1Q9UHA3 163 aaKnown RBP7.02□□□□□ -1.29
CSDE1-218ENST00000610726 MAN2B1O00754 1011 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 LILRB3O75022 631 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 SDC3O75056 442 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 ALPPP05187 535 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 ZDHHC11BP0C7U3 371 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 THEGLP0DJG4 465 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 FOSL2P15408 326 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 CAPN3P20807 821 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 RAB28P51157 221 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 TYSND1Q2T9J0 566 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 LIN52Q52LA3 116 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 KANK2Q63ZY3 851 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 OR2T5Q6IEZ7 315 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 DPPA4Q7L190 304 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 HMGN2P46Q86SG4 172 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 GKN2Q86XP6 184 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 LGI4Q8N135 537 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 OR7G3Q8NG95 312 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 OR10G2Q8NGC3 310 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 OR2T29Q8NH02 315 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 HSH2DQ96JZ2 352 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 DPH2Q9BQC3 489 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-218ENST00000610726 NEUROD4Q9HD90 331 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 PRDM8Q9NQV8 689 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 TVP23BQ9NYZ1 205 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 MCM8Q9UJA3 840 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 PPIEQ9UNP9 301 aaKnown RBP7.01□□□□□ -1.29
CSDE1-218ENST00000610726 GSTK1Q9Y2Q3 226 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 FAM86C2PA6NEL3 165 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 PRORSD1PA6NEY8 169 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 RGS10O43665 173 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 SORBS2O94875 1100 aaKnown RBP7.01□□□□□ -1.29
CSDE1-218ENST00000610726 C1SP09871 688 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 AK4P27144 223 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-218ENST00000610726 CSNK1DP48730 415 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 GSTM4Q03013 218 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 GALNT1Q10472 559 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-218ENST00000610726 GTDC1Q4AE62 458 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 FBXO43Q4G163 708 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 SFT2D3Q587I9 215 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 PHF19Q5T6S3 580 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 TSPEARQ8WU66 669 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 CHFRQ96EP1 664 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 SLC45A3Q96JT2 553 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 C5orf34Q96MH7 638 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 ZNF576Q9H609 170 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms