RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 TTC38Q5R3I4 469 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 TMEM201Q5SNT2 666 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 FAM182BQ5T319 152 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 PYHIN1Q6K0P9 492 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 LETMD1Q6P1Q0 360 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 FUT10Q6P4F1 479 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 NHLRC1Q6VVB1 395 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 OTOP1Q7RTM1 612 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 PRSS42Q7Z5A4 293 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 SYVN1Q86TM6 617 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 NLRX1Q86UT6 975 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 IQCHQ86VS3 1027 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 WFDC3Q8IUB2 231 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 CFAP206Q8IYR0 622 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 TMIEQ8NEW7 156 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 OR56B1Q8NGI3 324 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 NDNFQ8TB73 568 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 GTF3AQ92664 365 aaKnown RBP4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 PTCD3Q96EY7 689 aaKnown RBP4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 MISP3Q96FF7 219 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 ELMO2Q96JJ3 720 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 TGS1Q96RS0 853 aaKnown RBP4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 KCNS3Q9BQ31 491 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 OR51B6Q9H340 312 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 TOR3AQ9H497 397 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 ANKRA2Q9H9E1 313 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 YAE1D1Q9NRH1 226 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 ARL8BQ9NVJ2 186 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 RDH8Q9NYR8 311 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 GLTPQ9NZD2 209 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 TMEM9Q9P0T7 183 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 RCOR3Q9P2K3 495 aaPredicted RBP4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 NARFQ9UHQ1 456 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 ZFP69BQ9UJL9 534 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF221Q9UK13 617 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 U3KQV3 271 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 PFASO15067 1338 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 ADGRA3Q8IWK6 1321 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 A0A0X1KG70 313 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 FAM90A18PA6NE21 464 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 FAM90A16PA6NEW6 464 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 SLC15A5A6NIM6 579 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 NPIPB13A6NJU9 1138 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 FAM90A9PA6NNJ1 464 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 FAM90A5PA8MXJ8 464 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 LEUTXA8MZ59 168 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 KDM4EB2RXH2 506 aaPredicted RBP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 NPIPB4C9JG80 1138 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 PYCARD-AS1I3L0S3 204 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 J3QRK9 145 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 MAGEB2O15479 319 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 RAD51CO43502 376 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 B4GAT1O43505 415 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 RPP40O75818 363 aaKnown RBP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 RAB3DO95716 219 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 ENO1P06733 434 aaKnown RBP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 FAM90A15PP0C7V4 464 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 FAM90A14PP0C7W9 464 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 NID1P14543 1247 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 PKMP14618 531 aaKnown RBP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 CYP11B1P15538 503 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 HOXB4P17483 251 aaPredicted RBP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 HK1P19367 917 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 IMPDH1P20839 514 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 CCND2P30279 289 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 CCND3P30281 292 aaPredicted RBP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 UGT2B10P36537 528 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 SLC1A6P48664 564 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 MAPK12P53778 367 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 SPCS3P61009 180 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 RAB4BP61018 213 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 ESRRGP62508 458 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 TNK2Q07912 1038 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 PPP3CAQ08209 521 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 CAMK1Q14012 370 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 PGM5Q15124 567 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 ZMAT1Q5H9K5 638 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 C9orf50Q5SZB4 431 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 DCAF12L1Q5VU92 463 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 RSBN1Q5VWQ0 802 aaPredicted RBP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 ANKRD26P1Q6NSI1 321 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 ADCK2Q7Z695 626 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 PLCZ1Q86YW0 608 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 TSPAN14Q8NG11 270 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 FAM46BQ96A09 425 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 FBXL8Q96CD0 374 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF583Q96ND8 569 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 TRIB1Q96RU8 372 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 GPR20Q99678 358 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 MDFIQ99750 246 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 TUBGCP2Q9BSJ2 902 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 TRAF4Q9BUZ4 470 aaPredicted RBP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 CLEC4MQ9H2X3 399 aaPredicted RBP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 BOLA2Q9H3K6 86 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 GLOD4Q9HC38 313 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 COA4Q9NYJ1 87 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 POLLQ9UGP5 575 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 ANGEL1Q9UNK9 670 aaKnown RBP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 AUP1Q9Y679 476 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 MYH10P35580 1976 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms