RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 PSMA6P60900 246 aaKnown RBP9.33□□□□□ -0.92
CSMD1-217ENST00000602723 PON3Q15166 354 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF181Q2M3W8 571 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.33□□□□□ -0.92
CSMD1-217ENST00000602723 TCEAL3Q969E4 200 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 TCEAL4Q96EI5 215 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 PHOX2BQ99453 314 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 MCCC2Q9HCC0 563 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 CLCA3PQ9Y6N3 262 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 A0A1W2PP18 115 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 CLCA1A8K7I4 914 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 HSPA12AO43301 675 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 FPR1P21462 350 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 MFSD8Q8NHS3 518 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 SCGB1C1Q8TD33 95 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 OR52B2Q96RD2 323 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 SEC61A2Q9H9S3 476 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.33□□□□□ -0.92
CSMD1-217ENST00000602723 JUNP05412 331 aaKnown RBP9.32□□□□□ -0.92
CSMD1-217ENST00000602723 GLP1RP43220 463 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF45Q02386 682 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 HNRNPDQ14103 355 aaKnown RBP9.32□□□□□ -0.92
CSMD1-217ENST00000602723 DCDC5Q6ZRR9 648 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 NEDD4LQ96PU5 975 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 C1orf21Q9H246 121 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 SH2B3Q9UQQ2 575 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 KIAA1217Q5T5P2 1943 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 LAG3P18627 525 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 BMP8BP34820 402 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 MCCD1P59942 119 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-217ENST00000602723 REEP3Q6NUK4 255 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 USP50Q70EL3 339 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-217ENST00000602723 BMP8AQ7Z5Y6 402 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 RNF130Q86XS8 419 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 ASCC1Q8N9N2 400 aaKnown RBP9.32□□□□□ -0.92
CSMD1-217ENST00000602723 NIFKQ9BYG3 293 aaKnown RBP9.32□□□□□ -0.92
CSMD1-217ENST00000602723 POLE4Q9NR33 117 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 SMIM30A4D0T7 59 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 SLC31A1O15431 190 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 SLC19A2O60779 497 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 CSF2P04141 144 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 ASPAP45381 313 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 TREML2Q5T2D2 321 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 NATD1Q8N6N6 113 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 OR10Q1Q8NGQ4 319 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 RPL10LQ96L21 214 aaKnown RBP9.32□□□□□ -0.92
CSMD1-217ENST00000602723 HERC2P3Q9BVR0 1158 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF717Q9BY31 904 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-217ENST00000602723 RPF2Q9H7B2 306 aaKnown RBP9.32□□□□□ -0.92
CSMD1-217ENST00000602723 SERINC1Q9NRX5 453 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 ROBO1Q9Y6N7 1651 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 FAM170BA6NMN3 283 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 B8ZZF3 427 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 WNT9AO14904 365 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 TMEM63AO94886 807 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 UQCRC1P31930 480 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 MLLT3P42568 568 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-217ENST00000602723 TGFBIQ15582 683 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 MRIQ9BWK5 157 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 TSSK6Q9BXA6 273 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 E2F3O00716 465 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 ZC3HC1Q86WB0 502 aaKnown RBP9.32□□□□□ -0.92
CSMD1-217ENST00000602723 BIRC7Q96CA5 298 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 RHBDF1Q96CC6 855 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 ALPK1Q96QP1 1244 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 TSNAXQ99598 290 aaKnown RBP9.32□□□□□ -0.92
CSMD1-217ENST00000602723 MMP27Q9H306 513 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 A0A0G2JN53 185 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 CENPBD1B2RD01 187 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 PCDHGA12O60330 932 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 CREG1O75629 220 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 CDK6Q00534 326 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 VARS2Q5ST30 1063 aaKnown RBP9.32□□□□□ -0.92
CSMD1-217ENST00000602723 DCAF12L1Q5VU92 463 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 LIPKQ5VXJ0 399 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 MTFR2Q6P444 385 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 FUT10Q6P4F1 479 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 Q8N402 240 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 OR5T2Q8NGG2 359 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 TMEM41AQ96HV5 264 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 IL12RB2Q99665 862 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 TLR6Q9Y2C9 796 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 MEN1O00255 615 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 PLD2O14939 933 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 ADAMTS3O15072 1205 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 EEF1E1O43324 174 aaKnown RBP9.32□□□□□ -0.92
CSMD1-217ENST00000602723 FXYD6P3P58550 94 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 UFM1P61960 85 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 PTGR1Q14914 329 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 TREX2Q9BQ50 279 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-217ENST00000602723 FCER2P06734 321 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 IL7P13232 177 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 CCND3P30281 292 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-217ENST00000602723 TMBIM6P55061 237 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 GRIK5Q16478 980 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 MEP1AQ16819 746 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 GPAT4Q86UL3 456 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 TMEM126BQ8IUX1 230 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 CASTOR1Q8WTX7 329 aa9.32□□□□□ -0.92
CSMD1-217ENST00000602723 SLCO2A1Q92959 643 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms