RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 MEF2AQ02078 507 aaPredicted RBP16.92■□□□□ 0.3
CHMP2A-208ENST00000601220 USP10Q14694 798 aaKnown RBP16.92■□□□□ 0.3
CHMP2A-208ENST00000601220 ABRAXAS2Q15018 415 aa16.92■□□□□ 0.3
CHMP2A-208ENST00000601220 OR1C1Q15619 314 aa16.92■□□□□ 0.3
CHMP2A-208ENST00000601220 NSDHLQ15738 373 aa16.92■□□□□ 0.3
CHMP2A-208ENST00000601220 C3AR1Q16581 482 aa16.92■□□□□ 0.3
CHMP2A-208ENST00000601220 MSS51Q4VC12 460 aa16.92■□□□□ 0.3
CHMP2A-208ENST00000601220 PAPD4Q6PIY7 484 aaKnown RBP16.92■□□□□ 0.3
CHMP2A-208ENST00000601220 IGDCC3Q8IVU1 814 aa16.92■□□□□ 0.3
CHMP2A-208ENST00000601220 SIAH3Q8IW03 269 aa16.92■□□□□ 0.3
CHMP2A-208ENST00000601220 ZNF740Q8NDX6 193 aa16.92■□□□□ 0.3
CHMP2A-208ENST00000601220 ELP5Q8TE02 316 aa16.92■□□□□ 0.3
CHMP2A-208ENST00000601220 ADAMTS18Q8TE60 1221 aa16.92■□□□□ 0.3
CHMP2A-208ENST00000601220 THAP3Q8WTV1 239 aaPredicted RBP16.92■□□□□ 0.3
CHMP2A-208ENST00000601220 PYCR2Q96C36 320 aa16.92■□□□□ 0.3
CHMP2A-208ENST00000601220 RBCK1Q9BYM8 510 aa16.92■□□□□ 0.3
CHMP2A-208ENST00000601220 SUCOQ9UBS9 1254 aaKnown RBP16.92■□□□□ 0.3
CHMP2A-208ENST00000601220 OTOGQ6ZRI0 2925 aa16.92■□□□□ 0.3
CHMP2A-208ENST00000601220 CSMD2Q7Z408 3487 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 MYO7BQ6PIF6 2116 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 PDZD2O15018 2839 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 CTAGE15A4D2H0 777 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 ZNF860A6NHJ4 632 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 BANF1O75531 89 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 CDC123O75794 336 aaPredicted RBP16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 NEURL1O76050 574 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 B3GALT4O96024 378 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 POU3F2P20265 443 aaPredicted RBP16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 HTR1EP28566 365 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 CCR8P51685 355 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 PWP1Q13610 501 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 HERC3Q15034 1050 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 ZNF468Q5VIY5 522 aaPredicted RBP16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 DUPD1Q68J44 220 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 MTFR2Q6P444 385 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 RPTNQ6XPR3 784 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 Q6ZPB1 254 aaPredicted RBP16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 STRA8Q7Z7C7 330 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 CTAGE6Q86UF2 777 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 MYO1HQ8N1T3 1032 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 ALKBH8Q96BT7 664 aaKnown RBP16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 LINGO1Q96FE5 620 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 SNF8Q96H20 258 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 GPR137Q96N19 417 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 UTP23Q9BRU9 249 aaKnown RBP16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 HAUS8Q9BT25 410 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 SPNS1Q9H2V7 528 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 SH3BGRL2Q9UJC5 107 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 IKZF3Q9UKT9 509 aa16.91■□□□□ 0.3
CHMP2A-208ENST00000601220 PGRMC1O00264 195 aaKnown RBP16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 TTI1O43156 1089 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 CHST10O43529 356 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 FHP07954 510 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 SLC35G6P0C7Q6 338 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 ELAVL4P26378 380 aaKnown RBP16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 GRK3P35626 688 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 FNTAP49354 379 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 SLC26A5P58743 744 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 RBPJQ06330 500 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 CDSNQ15517 529 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 KRTCAP3Q53RY4 240 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 CATSPEREQ5SY80 951 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 KIAA0408Q6ZU52 694 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 GALNT7Q86SF2 657 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 ZNF227Q86WZ6 799 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 CHERPQ8IWX8 916 aaKnown RBP16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 PALM2Q8IXS6 379 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 LGI4Q8N135 537 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 NT5CQ8TCD5 201 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 ACTRT1Q8TDG2 376 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 TBC1D20Q96BZ9 403 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 FRMD6Q96NE9 622 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 LPAR4Q99677 370 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 KLHL1Q9NR64 748 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 SLC17A6Q9P2U8 582 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 TINAGQ9UJW2 476 aa16.9■□□□□ 0.3
CHMP2A-208ENST00000601220 TRBC2A0A5B9 178 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 GABRR3A8MPY1 467 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 NDUFS4O43181 175 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 OR1F1O43749 312 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 TTC4O95801 387 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 HIST1H2AGP0C0S8 130 aaPredicted RBP16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 ALOX12P18054 663 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 HIST1H2ADP20671 130 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 IVDP26440 423 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 SCTRP47872 440 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 OR4D2P58180 307 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 OLR1P78380 273 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 ACTN3Q08043 901 aaPredicted RBP16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 HYAL2Q12891 473 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 DEFB134Q4QY38 66 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 SPANXN3Q5MJ09 141 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 TEDDM1Q5T9Z0 273 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 SPPL2CQ8IUH8 684 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 KIF2BQ8N4N8 673 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 SLC5A8Q8N695 610 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 UTP15Q8TED0 518 aaKnown RBP16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 FBXL8Q96CD0 374 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 HIST1H2AHQ96KK5 128 aa16.89■□□□□ 0.29
CHMP2A-208ENST00000601220 NAP1L3Q99457 506 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms