RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 TEX19Q8NA77 164 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 KCT2Q8NC54 265 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 ZNF740Q8NDX6 193 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 OR11G2Q8NGC1 345 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 OR9A4Q8NGU2 314 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 ZCCHC10Q8TBK6 192 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 NT5CQ8TCD5 201 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 MTBPQ96DY7 904 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 MOCOSQ96EN8 888 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 VPS50Q96JG6 964 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 PKNOX2Q96KN3 472 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 ATOH8Q96SQ7 321 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 PAFAH2Q99487 392 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 MACROD1Q9BQ69 325 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 AIF1LQ9BQI0 150 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 TRIM4Q9C037 500 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 EPB41L4BQ9H329 900 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 ANKHQ9HCJ1 492 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 ATP13A2Q9NQ11 1180 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 WWOXQ9NZC7 414 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 GPRC5BQ9NZH0 403 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 NUDT4Q9NZJ9 180 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 PSMC3IPQ9P2W1 217 aaPredicted RBP7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 COPG2Q9UBF2 871 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 ZFP69BQ9UJL9 534 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 C3orf18Q9UK00 162 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 SCN3AQ9NY46 2000 aa7.56□□□□□ -1.2
CHMP2A-205ENST00000600006 GCN1Q92616 2671 aaKnown RBP7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 HELZ2Q9BYK8 2649 aaKnown RBP7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 A0A087X1B8 175 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 LOC102723996A0A087X1L8 192 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 CCDC189A1A4V9 331 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 NCF1BA6NI72 391 aaPredicted RBP7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 A6NL46 340 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 NCF1CA8MVU1 366 aaPredicted RBP7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 MASP2O00187 686 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 DPM1O60762 260 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 CDH16O75309 829 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 ALOX12BO75342 701 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 RDH16O75452 317 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 SORBS2O94875 1100 aaKnown RBP7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 KLHL18O94889 574 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 WISP1O95388 367 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 BMP10O95393 424 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 ALPPP05187 535 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 LTA4HP09960 611 aaKnown RBP7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 COX6A1P12074 109 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 NCF1P14598 390 aaPredicted RBP7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 ALOX12P18054 663 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 TFEBP19484 476 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 GSTM2P28161 218 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 GDF5P43026 501 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 MAGEA12P43365 314 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 HSPA7P48741 367 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 SERPINB8P50452 374 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 EMP2P54851 167 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 RGS1Q08116 209 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 BMPR2Q13873 1038 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 E2F2Q14209 437 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 NAA30Q147X3 362 aaPredicted RBP7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 UAP1Q16222 522 aaPredicted RBP7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 ATG9BQ674R7 924 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 SULT1C3Q6IMI6 304 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 NIPAL1Q6NVV3 410 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 ADGRD1Q6QNK2 874 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 TMEM205Q6UW68 189 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 RAPH1Q70E73 1250 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 LRRC70Q7Z2Q7 622 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 CROCCP2Q86T23 111 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 ISCA2Q86U28 154 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 LAPTM4BQ86VI4 370 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 CENPLQ8N0S6 344 aaPredicted RBP7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 ANKRD53Q8N9V6 530 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 TRPV3Q8NET8 790 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 STAG3L4Q8TBR4 150 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 UBTD2Q8WUN7 234 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 DCAKDQ8WVC6 231 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 ISL2Q96A47 359 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 WDR34Q96EX3 536 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 MESP1Q9BRJ9 268 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 ROPN1BQ9BZX4 212 aaPredicted RBP7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 SLC6A16Q9GZN6 736 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 EHD1Q9H4M9 534 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 ALG9Q9H6U8 611 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 ZNF552Q9H707 407 aaPredicted RBP7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 CNOT10Q9H9A5 744 aaKnown RBP7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 ROPN1Q9HAT0 212 aaPredicted RBP7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 NMRAL1Q9HBL8 299 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 SNX15Q9NRS6 342 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 IGSF5Q9NSI5 407 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 DNAJC11Q9NVH1 559 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 HCN3Q9P1Z3 774 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 PTBP2Q9UKA9 531 aaKnown RBP7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 RNF112Q9ULX5 631 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 ACOT9Q9Y305 439 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 NAALAD2Q9Y3Q0 740 aa7.55□□□□□ -1.2
CHMP2A-205ENST00000600006 BOD1L1Q8NFC6 3051 aa7.54□□□□□ -1.2
CHMP2A-205ENST00000600006 A0A096LPK6 155 aa7.54□□□□□ -1.2
CHMP2A-205ENST00000600006 IGHV1-45A0A0A0MS14 117 aa7.54□□□□□ -1.2
CHMP2A-205ENST00000600006 IQANK1A0A1B0GTG1 560 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms