RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 NDUFA9Q16795 377 aa14.22□□□□□ -0.13
SCN1B-204ENST00000596348 SYT16Q17RD7 645 aa14.22□□□□□ -0.13
SCN1B-204ENST00000596348 BORAQ6PGQ7 559 aa14.22□□□□□ -0.13
SCN1B-204ENST00000596348 TMIGD1Q6UXZ0 262 aa14.22□□□□□ -0.13
SCN1B-204ENST00000596348 SHISA6Q6ZSJ9 500 aa14.22□□□□□ -0.13
SCN1B-204ENST00000596348 AFAP1L2Q8N4X5 818 aa14.22□□□□□ -0.13
SCN1B-204ENST00000596348 MREGQ8N565 214 aa14.22□□□□□ -0.13
SCN1B-204ENST00000596348 NT5CQ8TCD5 201 aa14.22□□□□□ -0.13
SCN1B-204ENST00000596348 PHF21BQ96EK2 531 aa14.22□□□□□ -0.13
SCN1B-204ENST00000596348 PTCD3Q96EY7 689 aaKnown RBP14.22□□□□□ -0.13
SCN1B-204ENST00000596348 MMABQ96EY8 250 aaPredicted RBP14.22□□□□□ -0.13
SCN1B-204ENST00000596348 CATSPER2Q96P56 530 aa14.22□□□□□ -0.13
SCN1B-204ENST00000596348 SLC6A16Q9GZN6 736 aa14.22□□□□□ -0.13
SCN1B-204ENST00000596348 WDR54Q9H977 334 aa14.22□□□□□ -0.13
SCN1B-204ENST00000596348 ZNF490Q9ULM2 529 aaPredicted RBP14.22□□□□□ -0.13
SCN1B-204ENST00000596348 CDC14AQ9UNH5 594 aa14.22□□□□□ -0.13
SCN1B-204ENST00000596348 POLHQ9Y253 713 aa14.22□□□□□ -0.13
SCN1B-204ENST00000596348 KCNMB2Q9Y691 235 aa14.22□□□□□ -0.13
SCN1B-204ENST00000596348 SLC22A7Q9Y694 548 aa14.22□□□□□ -0.13
SCN1B-204ENST00000596348 SCN2AQ99250 2005 aa14.22□□□□□ -0.13
SCN1B-204ENST00000596348 E2F3O00716 465 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 ATXN7O15265 892 aaPredicted RBP14.21□□□□□ -0.13
SCN1B-204ENST00000596348 CDH16O75309 829 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 H2AFYO75367 372 aaKnown RBP14.21□□□□□ -0.13
SCN1B-204ENST00000596348 NSA2O95478 260 aaKnown RBP14.21□□□□□ -0.13
SCN1B-204ENST00000596348 TBX6O95947 436 aaPredicted RBP14.21□□□□□ -0.13
SCN1B-204ENST00000596348 FAM87AP0C7U9 286 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 EPB42P16452 691 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 CXCR2P25025 360 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 EEF1DP29692 281 aaKnown RBP14.21□□□□□ -0.13
SCN1B-204ENST00000596348 OTX2P32243 289 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 SOWAHCQ53LP3 525 aaPredicted RBP14.21□□□□□ -0.13
SCN1B-204ENST00000596348 VWA2Q5GFL6 755 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 GOLGA7Q7Z5G4 137 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 MRGPREQ86SM8 312 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 PRSS58Q8IYP2 241 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 KRT78Q8N1N4 520 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 EXD3Q8N9H8 876 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 TRPV3Q8NET8 790 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 STT3BQ8TCJ2 826 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 NSUN5Q96P11 429 aaKnown RBP14.21□□□□□ -0.13
SCN1B-204ENST00000596348 MESP1Q9BRJ9 268 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 EFCAB11Q9BUY7 163 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 PITHD1Q9GZP4 211 aaPredicted RBP14.21□□□□□ -0.13
SCN1B-204ENST00000596348 KLHL31Q9H511 634 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 SOX17Q9H6I2 414 aaPredicted RBP14.21□□□□□ -0.13
SCN1B-204ENST00000596348 NT5DC2Q9H857 520 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 TRPC4Q9UBN4 977 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 ZNF282Q9UDV7 671 aaPredicted RBP14.21□□□□□ -0.13
SCN1B-204ENST00000596348 EMCNQ9ULC0 261 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 MAN2B2Q9Y2E5 1009 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 MAP4K5Q9Y4K4 846 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 CNTRLQ7Z7A1 2325 aa14.21□□□□□ -0.13
SCN1B-204ENST00000596348 NUP210LQ5VU65 1888 aa14.21□□□□□ -0.14
SCN1B-204ENST00000596348 TLDC2A0PJX2 215 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 ZNF860A6NHJ4 632 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 A8MT66 165 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 STX16-NPEPL1H3BU86 382 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 SGK494L7N484 410 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 STX16O14662 325 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 DNAJB6O75190 326 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 SMIM24O75264 130 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 RDH16O75452 317 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 KLHL18O94889 574 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 SERPINA6P08185 405 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 CD63P08962 238 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 ZGLP1P0C6A0 271 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 ZNF888P0CJ79 500 aaPredicted RBP14.2□□□□□ -0.14
SCN1B-204ENST00000596348 KRT15P19012 456 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 HNRNPH1P31943 449 aaKnown RBP14.2□□□□□ -0.14
SCN1B-204ENST00000596348 HNF4AP41235 474 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 EFNA3P52797 238 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 KLC1Q07866 573 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 RGS1Q08116 209 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 ATP1A4Q13733 1029 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 GTF2H2Q13888 395 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 LY6DQ14210 128 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 CPZQ66K79 652 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 GTF2H2CQ6P1K8 395 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 RPS27LQ71UM5 84 aaKnown RBP14.2□□□□□ -0.14
SCN1B-204ENST00000596348 PPP1R32Q7Z5V6 425 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 LAPTM4BQ86VI4 370 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 LCA5Q86VQ0 697 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 ZC3H7AQ8IWR0 971 aaKnown RBP14.2□□□□□ -0.14
SCN1B-204ENST00000596348 CNPY4Q8N129 248 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 UTP15Q8TED0 518 aaKnown RBP14.2□□□□□ -0.14
SCN1B-204ENST00000596348 ANKHQ9HCJ1 492 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 ZBTB26Q9HCK0 441 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 HCN3Q9P1Z3 774 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 NXT1Q9UKK6 140 aaKnown RBP14.2□□□□□ -0.14
SCN1B-204ENST00000596348 PCTPQ9UKL6 214 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 TMCO1Q9UM00 188 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 NAALAD2Q9Y3Q0 740 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 ANGPTL3Q9Y5C1 460 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 TNPO3Q9Y5L0 923 aaKnown RBP14.2□□□□□ -0.14
SCN1B-204ENST00000596348 DOCK10Q96BY6 2186 aa14.2□□□□□ -0.14
SCN1B-204ENST00000596348 ZNF462Q96JM2 2506 aa14.19□□□□□ -0.14
SCN1B-204ENST00000596348 H0YIG0 161 aa14.19□□□□□ -0.14
SCN1B-204ENST00000596348 PRPF4O43172 522 aaKnown RBP eCLIP14.19□□□□□ -0.14
SCN1B-204ENST00000596348 GALR3O60755 368 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms