RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 CD274Q9NZQ7 290 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 ANKRD12Q6UB98 2062 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 TEX51A0A1B0GUA7 166 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 H7BY64 318 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 KERAO60938 352 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 S100BP04271 92 aaPredicted RBP18.76■□□□□ 0.59
LSM4-203ENST00000593829 KCNC1P48547 511 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 PRAMEF17Q5VTA0 474 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 SULT1C3Q6IMI6 304 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 TIFABQ6ZNK6 161 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 RNF44Q7L0R7 432 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 IL22RA1Q8N6P7 574 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 GALNT6Q8NCL4 622 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 RHEBL1Q8TAI7 183 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 PRAP1Q96NZ9 151 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 ZFYVE21Q9BQ24 234 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 NDE1Q9NXR1 346 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 AP1M2Q9Y6Q5 423 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 CELSR3Q9NYQ7 3312 aa18.75■□□□□ 0.59
LSM4-203ENST00000593829 A0A0J9YVX5 310 aa18.75■□□□□ 0.59
LSM4-203ENST00000593829 H3BMH7 237 aa18.75■□□□□ 0.59
LSM4-203ENST00000593829 SRPX2O60687 465 aaPredicted RBP18.75■□□□□ 0.59
LSM4-203ENST00000593829 RFPL1O75677 317 aa18.75■□□□□ 0.59
LSM4-203ENST00000593829 COL6A2P12110 1019 aa18.75■□□□□ 0.59
LSM4-203ENST00000593829 GLRBP48167 497 aa18.75■□□□□ 0.59
LSM4-203ENST00000593829 RELAQ04206 551 aa18.75■□□□□ 0.59
LSM4-203ENST00000593829 TCTE1Q5JU00 501 aa18.75■□□□□ 0.59
LSM4-203ENST00000593829 FBXO42Q6P3S6 717 aa18.75■□□□□ 0.59
LSM4-203ENST00000593829 CRLF3Q8IUI8 442 aa18.75■□□□□ 0.59
LSM4-203ENST00000593829 PDPRQ8NCN5 879 aa18.75■□□□□ 0.59
LSM4-203ENST00000593829 EXT2Q93063 718 aa18.75■□□□□ 0.59
LSM4-203ENST00000593829 GPR78Q96P69 363 aa18.75■□□□□ 0.59
LSM4-203ENST00000593829 OR4K3Q96R72 315 aa18.75■□□□□ 0.59
LSM4-203ENST00000593829 ATOH8Q96SQ7 321 aa18.75■□□□□ 0.59
LSM4-203ENST00000593829 SLC7A5P2Q9GIP4 190 aa18.75■□□□□ 0.59
LSM4-203ENST00000593829 NUDT4Q9NZJ9 180 aa18.75■□□□□ 0.59
LSM4-203ENST00000593829 ARMCX1Q9P291 453 aa18.75■□□□□ 0.59
LSM4-203ENST00000593829 SH2B3Q9UQQ2 575 aa18.75■□□□□ 0.59
LSM4-203ENST00000593829 ANKRD11Q6UB99 2663 aaPredicted RBP18.75■□□□□ 0.59
LSM4-203ENST00000593829 SYCE1LA8MT33 242 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 ZSCAN9O15535 394 aaPredicted RBP18.74■□□□□ 0.59
LSM4-203ENST00000593829 ZNF749O43361 778 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 CTSBP07858 339 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 HBQ1P09105 142 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 CCNYL3P0C7X3 344 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 CRHR1P34998 444 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 TLE3Q04726 772 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 BROXQ5VW32 411 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 THOC6Q86W42 341 aaKnown RBP18.74■□□□□ 0.59
LSM4-203ENST00000593829 PLD6Q8N2A8 252 aaKnown RBP18.74■□□□□ 0.59
LSM4-203ENST00000593829 WWOXQ9NZC7 414 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 SLC7A8Q9UHI5 535 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 SLC22A14Q9Y267 594 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.74■□□□□ 0.59
LSM4-203ENST00000593829 SUPT3HB4E1H0 165 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 SUPT3HO75486 399 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 IPO13O94829 963 aaKnown RBP18.74■□□□□ 0.59
LSM4-203ENST00000593829 ENO1P06733 434 aaKnown RBP18.74■□□□□ 0.59
LSM4-203ENST00000593829 CDH1P12830 882 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 ITPKBP27987 946 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 GGT5P36269 586 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 SLC6A12P48065 614 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 SH3BGRP55822 239 aaPredicted RBP18.74■□□□□ 0.59
LSM4-203ENST00000593829 PDCD2Q16342 344 aaPredicted RBP18.74■□□□□ 0.59
LSM4-203ENST00000593829 C18orf21Q32NC0 220 aaPredicted RBP18.74■□□□□ 0.59
LSM4-203ENST00000593829 MANEAQ5SRI9 462 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 FRMPD2BQ6IN97 320 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 ZNF655Q8N720 491 aaPredicted RBP18.74■□□□□ 0.59
LSM4-203ENST00000593829 SLC38A9Q8NBW4 561 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 CLIP3Q96DZ5 547 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 TSNARE1Q96NA8 513 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 ZNF285Q96NJ3 590 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 PADI1Q9ULC6 663 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 SSUH2Q9Y2M2 353 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 DYRK1BQ9Y463 629 aa18.74■□□□□ 0.59
LSM4-203ENST00000593829 AHCTF1Q8WYP5 2266 aa18.73■□□□□ 0.59
LSM4-203ENST00000593829 TAPBPO15533 448 aa18.73■□□□□ 0.59
LSM4-203ENST00000593829 WDR47O94967 919 aa18.73■□□□□ 0.59
LSM4-203ENST00000593829 BPGMP07738 259 aa18.73■□□□□ 0.59
LSM4-203ENST00000593829 VSX2P58304 361 aaPredicted RBP18.73■□□□□ 0.59
LSM4-203ENST00000593829 ABHD18Q0P651 414 aa18.73■□□□□ 0.59
LSM4-203ENST00000593829 IZUMO2Q6UXV1 221 aa18.73■□□□□ 0.59
LSM4-203ENST00000593829 KLHDC8AQ8IYD2 350 aa18.73■□□□□ 0.59
LSM4-203ENST00000593829 LRFN5Q96NI6 719 aa18.73■□□□□ 0.59
LSM4-203ENST00000593829 CCNL2Q96S94 520 aaPredicted RBP18.73■□□□□ 0.59
LSM4-203ENST00000593829 ENAMQ9NRM1 1142 aa18.73■□□□□ 0.59
LSM4-203ENST00000593829 PTBP2Q9UKA9 531 aaKnown RBP18.73■□□□□ 0.59
LSM4-203ENST00000593829 KCNE2Q9Y6J6 123 aa18.73■□□□□ 0.59
LSM4-203ENST00000593829 LOC105369274A0A096LPK9 316 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 LOC102723532A0A0G2JNH3 316 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 UBXN8O00124 270 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 HAT1O14929 419 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 KLK3P07288 261 aaPredicted RBP18.72■□□□□ 0.59
LSM4-203ENST00000593829 RBP1P09455 135 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 CPOXP36551 454 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 STAT5AP42229 794 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 GDF5P43026 501 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 CCR8P51685 355 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 RPS6KA3P51812 740 aa18.72■□□□□ 0.59
LSM4-203ENST00000593829 CSNK1G2P78368 415 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms