RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ANKRD37Q7Z713 158 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 GALNT7Q86SF2 657 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 ASB11Q8WXH4 323 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 UTP23Q9BRU9 249 aaKnown RBP13.9□□□□□ -0.18
PNKP-202ENST00000593706 NAT9Q9BTE0 207 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 AARSD1Q9BTE6 412 aaKnown RBP13.9□□□□□ -0.18
PNKP-202ENST00000593706 RBCK1Q9BYM8 510 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 ANKHQ9HCJ1 492 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 TMEM184CQ9NVA4 438 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 DHRS7Q9Y394 339 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 COMMD10Q9Y6G5 202 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 TEX264Q9Y6I9 313 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 DNAJC13O75165 2243 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 SGK494L7N484 410 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 RDH16O75452 317 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 SLC35G6P0C7Q6 338 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 CD46P15529 392 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 HRH2P25021 359 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 ST13P50502 369 aaKnown RBP13.89□□□□□ -0.19
PNKP-202ENST00000593706 SNRPNP63162 240 aaKnown RBP13.89□□□□□ -0.19
PNKP-202ENST00000593706 ADORA2A-AS1P86434 159 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 OC90Q02509 493 aaPredicted RBP13.89□□□□□ -0.19
PNKP-202ENST00000593706 FRG1Q14331 258 aaKnown RBP13.89□□□□□ -0.19
PNKP-202ENST00000593706 ABRAXAS2Q15018 415 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 OR1C1Q15619 314 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 MEP1AQ16819 746 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 BBS9Q3SYG4 887 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 CYHR1Q6ZMK1 362 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 VN1R4Q7Z5H5 301 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 CRLF3Q8IUI8 442 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 SLC5A8Q8N695 610 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 TMEM178AQ8NBL3 297 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 FAM98AQ8NCA5 519 aaKnown RBP13.89□□□□□ -0.19
PNKP-202ENST00000593706 MDS2Q8NDY4 140 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 GPR137Q96N19 417 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 SIGLEC12Q96PQ1 595 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 GPR21Q99679 349 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 MACROD1Q9BQ69 325 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 HES7Q9BYE0 225 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 IARS2Q9NSE4 1012 aaKnown RBP13.89□□□□□ -0.19
PNKP-202ENST00000593706 SLC17A6Q9P2U8 582 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 PCDHGB6Q9Y5F9 930 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 PHF3Q92576 2039 aaKnown RBP13.89□□□□□ -0.19
PNKP-202ENST00000593706 EML6Q6ZMW3 1958 aa13.89□□□□□ -0.19
PNKP-202ENST00000593706 OR2W5A6NFC9 320 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 E7ESA3 106 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 GFYI3L273 518 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 CDC123O75794 336 aaPredicted RBP13.88□□□□□ -0.19
PNKP-202ENST00000593706 ABOP16442 354 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 GRK3P35626 688 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 BCL6P41182 706 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 ELK3P41970 407 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 SKIV2L2P42285 1042 aaKnown RBP13.88□□□□□ -0.19
PNKP-202ENST00000593706 RPL21P46778 160 aaKnown RBP13.88□□□□□ -0.19
PNKP-202ENST00000593706 ITGA8P53708 1063 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 RIPPLY3P57055 190 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 TAS2R50P59544 299 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 ACTN3Q08043 901 aaPredicted RBP13.88□□□□□ -0.19
PNKP-202ENST00000593706 SFT2D3Q587I9 215 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 TMEM214Q6NUQ4 689 aaKnown RBP13.88□□□□□ -0.19
PNKP-202ENST00000593706 TRMT10BQ6PF06 316 aaKnown RBP13.88□□□□□ -0.19
PNKP-202ENST00000593706 PAPD4Q6PIY7 484 aaKnown RBP13.88□□□□□ -0.19
PNKP-202ENST00000593706 KIAA0408Q6ZU52 694 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 PIWIL4Q7Z3Z4 852 aaKnown RBP13.88□□□□□ -0.19
PNKP-202ENST00000593706 C17orf64Q86WR6 236 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 LRRC56Q8IYG6 542 aaPredicted RBP13.88□□□□□ -0.19
PNKP-202ENST00000593706 CPNE9Q8IYJ1 553 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 PDIK1LQ8N165 341 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 CAMKVQ8NCB2 501 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 THAP3Q8WTV1 239 aaPredicted RBP13.88□□□□□ -0.19
PNKP-202ENST00000593706 ALKBH8Q96BT7 664 aaKnown RBP13.88□□□□□ -0.19
PNKP-202ENST00000593706 LRRC39Q96DD0 335 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 CERS2Q96G23 380 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 SNF8Q96H20 258 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 TRIM8Q9BZR9 551 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 PCBD2Q9H0N5 130 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 GPAMQ9HCL2 828 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 ITGB1BP2Q9UKP3 347 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 ZNF407Q9C0G0 2248 aa13.88□□□□□ -0.19
PNKP-202ENST00000593706 KCNE1BA0A087WTH5 132 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 FEZF1A0PJY2 475 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 ZNF860A6NHJ4 632 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 GABRR3A8MPY1 467 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 NPIPA5E9PKD4 350 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 EIF3FO00303 357 aaPredicted RBP13.87□□□□□ -0.19
PNKP-202ENST00000593706 CLDN14O95500 239 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 AHSGP02765 367 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 AGAP20933 346 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 CD96P40200 585 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 CDKN2DP55273 166 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 ETF1P62495 437 aaKnown RBP13.87□□□□□ -0.19
PNKP-202ENST00000593706 FASTKD3Q14CZ7 662 aaKnown RBP13.87□□□□□ -0.19
PNKP-202ENST00000593706 NSDHLQ15738 373 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 KRTCAP3Q53RY4 240 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 RBM20Q5T481 1227 aaKnown RBP13.87□□□□□ -0.19
PNKP-202ENST00000593706 TEDDM1Q5T9Z0 273 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 SPINK14Q6IE38 97 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 H3F3CQ6NXT2 135 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 ASPGQ86U10 573 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 SPPL2CQ8IUH8 684 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms