RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 HUNKP57058 714 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 TEFQ10587 303 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 GAGE2BQ13066 116 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 ITPK1Q13572 414 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 PTK6Q13882 451 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 RCN2Q14257 317 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 GAGE2EQ4V326 116 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 FAM98BQ52LJ0 330 aaKnown RBP4.57□□□□□ -1.68
SMAD4-216ENST00000593223 FAM72AQ5TYM5 149 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 SHEQ5VZ18 495 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 KRTAP5-11Q6L8G4 156 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 FAM72DQ6L9T8 149 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 GAGE2AQ6NT46 116 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 SLC25A24Q6NUK1 477 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 MIER3Q7Z3K6 550 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 FAM72BQ86X60 149 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 PDCL2Q8N4E4 241 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 SYT2Q8N9I0 419 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-216ENST00000593223 SLC4A11Q8NBS3 891 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 PRPF31Q8WWY3 499 aaKnown RBP4.57□□□□□ -1.68
SMAD4-216ENST00000593223 MR1Q95460 341 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 C8orf76Q96K31 380 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 PRMT6Q96LA8 375 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-216ENST00000593223 FER1L6-AS2Q96M78 137 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 PAFAH2Q99487 392 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 GAL3ST1Q99999 423 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 MLPHQ9BV36 600 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-216ENST00000593223 TRIM7Q9C029 511 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 OSGEPL1Q9H4B0 414 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 MBNL1Q9NR56 388 aaKnown RBP4.57□□□□□ -1.68
SMAD4-216ENST00000593223 ABCB8Q9NUT2 735 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 IL20Q9NYY1 176 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 GAGE2DQ9UEU5 116 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 PLAGL1Q9UM63 463 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 KIF1BO60333 1816 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 RBBP6Q7Z6E9 1792 aaKnown RBP4.57□□□□□ -1.68
SMAD4-216ENST00000593223 WDR81Q562E7 1941 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 hCG_1809904A0A1W2PP81 198 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 A0A1W2PPE2 198 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 A0A1W2PPI3 338 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 A0A1W2PR64 198 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 C5orf60A6NFR6 353 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 ZSCAN5CA6NGD5 496 aaPredicted RBP4.56□□□□□ -1.68
SMAD4-216ENST00000593223 TMCO5BA8MYB1 307 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 POLR2DO15514 142 aaKnown RBP4.56□□□□□ -1.68
SMAD4-216ENST00000593223 REC8O95072 547 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 NR3C1P04150 777 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 TUBBP07437 444 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 SP1P08047 785 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 SUPT20HL2P0C7V6 817 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 ZNF853P0CG23 659 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 VPREB1P12018 145 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 SELLP14151 372 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 PRLRP16471 622 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 CASTP20810 708 aaKnown RBP4.56□□□□□ -1.68
SMAD4-216ENST00000593223 JAK1P23458 1154 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 MMP15P51511 669 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 ARSEP51690 589 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 NPRL3Q12980 569 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 KIR2DS3Q14952 304 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 CCDC152Q4G0S7 254 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 IGSF11Q5DX21 431 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 NHSL2Q5HYW2 709 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 TCTE1Q5JU00 501 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 KLC3Q6P597 504 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 SLC27A1Q6PCB7 646 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 CCDC80Q76M96 950 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 TAF8Q7Z7C8 310 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 AACSQ86V21 672 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 CDH26Q8IXH8 852 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 FBXW8Q8N3Y1 598 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 ARL14Q8N4G2 192 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 MCUQ8NE86 351 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 OR8K3Q8NH51 312 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 RUFY1Q96T51 708 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 KCNK16Q96T55 309 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 KIFC3Q9BVG8 833 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 NACAP1Q9BZK3 213 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 ANKRD2Q9GZV1 360 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 APOBEC3GQ9HC16 384 aaKnown RBP4.56□□□□□ -1.68
SMAD4-216ENST00000593223 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.56□□□□□ -1.68
SMAD4-216ENST00000593223 HOMER3Q9NSC5 361 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 GDAP2Q9NXN4 497 aa4.56□□□□□ -1.68
SMAD4-216ENST00000593223 PTRH2Q9Y3E5 179 aaKnown RBP4.56□□□□□ -1.68
SMAD4-216ENST00000593223 KDRP35968 1356 aa4.55□□□□□ -1.68
SMAD4-216ENST00000593223 EIF3AQ14152 1382 aaKnown RBP4.55□□□□□ -1.68
SMAD4-216ENST00000593223 SMCHD1A6NHR9 2005 aa4.55□□□□□ -1.68
SMAD4-216ENST00000593223 AKAP11Q9UKA4 1901 aa4.55□□□□□ -1.68
SMAD4-216ENST00000593223 LNP1A1A4G5 178 aa4.55□□□□□ -1.68
SMAD4-216ENST00000593223 ARHGEF37A1IGU5 675 aa4.55□□□□□ -1.68
SMAD4-216ENST00000593223 OR2A25A4D2G3 310 aa4.55□□□□□ -1.68
SMAD4-216ENST00000593223 TO15178 435 aa4.55□□□□□ -1.68
SMAD4-216ENST00000593223 GPR137BO60478 399 aa4.55□□□□□ -1.68
SMAD4-216ENST00000593223 AVILO75366 819 aa4.55□□□□□ -1.68
SMAD4-216ENST00000593223 ZNF254O75437 659 aa4.55□□□□□ -1.68
SMAD4-216ENST00000593223 RECQL5O94762 991 aaPredicted RBP4.55□□□□□ -1.68
SMAD4-216ENST00000593223 ZWINTO95229 277 aa4.55□□□□□ -1.68
SMAD4-216ENST00000593223 FGFR1OPO95684 399 aaKnown RBP4.55□□□□□ -1.68
SMAD4-216ENST00000593223 ALPPP05187 535 aa4.55□□□□□ -1.68
SMAD4-216ENST00000593223 S100A6P06703 90 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms