RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 TSLPQ969D9 159 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 MOCOSQ96EN8 888 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 CCDC120Q96HB5 630 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 SIGLEC12Q96PQ1 595 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 PPANQ9NQ55 473 aaKnown RBP19.28■□□□□ 0.68
TRIM47-207ENST00000593089 KLHL1Q9NR64 748 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 MAN1A2O60476 641 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 WISP2O76076 250 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 TSPAN12O95859 305 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 CCR8P51685 355 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 IL2P60568 153 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 RBPJQ06330 500 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 HERC3Q15034 1050 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 BBS9Q3SYG4 887 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 DUPD1Q68J44 220 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 IGDCC3Q8IVU1 814 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 CNTN4Q8IWV2 1026 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 GPATCH11Q8N954 259 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 ZNF740Q8NDX6 193 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 PLPP5Q8NEB5 264 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 ITLN2Q8WWU7 325 aaPredicted RBP19.27■□□□□ 0.68
TRIM47-207ENST00000593089 CERS2Q96G23 380 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 SNF8Q96H20 258 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 LPAR4Q99677 370 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 NPAS2Q99743 824 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 UTP23Q9BRU9 249 aaKnown RBP19.27■□□□□ 0.68
TRIM47-207ENST00000593089 HES7Q9BYE0 225 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 UNKQ9C0B0 810 aaKnown RBP19.27■□□□□ 0.68
TRIM47-207ENST00000593089 LANCL2Q9NS86 450 aa19.27■□□□□ 0.68
TRIM47-207ENST00000593089 TTI1O43156 1089 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 DNAJB6O75190 326 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 GUCA1CO95843 209 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 B3GALT4O96024 378 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 GRNP28799 593 aaKnown RBP19.26■□□□□ 0.67
TRIM47-207ENST00000593089 CD96P40200 585 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 CA7P43166 264 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 OR4D2P58180 307 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 OLR1P78380 273 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 NAA30Q147X3 362 aaPredicted RBP19.26■□□□□ 0.67
TRIM47-207ENST00000593089 OR1C1Q15619 314 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 DEFB134Q4QY38 66 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 CATSPEREQ5SY80 951 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 HECTD2Q5U5R9 776 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 KIAA0408Q6ZU52 694 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 MRGPRGQ86SM5 289 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 MDS2Q8NDY4 140 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 ABHD11Q8NFV4 315 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 OR56A3Q8NH54 315 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 OR4K3Q96R72 315 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 OR1F2PQ96R84 312 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 TRIM54Q9BYV2 358 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 DDX47Q9H0S4 455 aaKnown RBP19.26■□□□□ 0.67
TRIM47-207ENST00000593089 MMP25Q9NPA2 562 aa19.26■□□□□ 0.67
TRIM47-207ENST00000593089 MAGEB17A8MXT2 336 aa19.25■□□□□ 0.67
TRIM47-207ENST00000593089 FAM227AF5H4B4 570 aa19.25■□□□□ 0.67
TRIM47-207ENST00000593089 GALR3O60755 368 aaPredicted RBP19.25■□□□□ 0.67
TRIM47-207ENST00000593089 FHP07954 510 aa19.25■□□□□ 0.67
TRIM47-207ENST00000593089 IL10P22301 178 aa19.25■□□□□ 0.67
TRIM47-207ENST00000593089 AP1S2P56377 157 aa19.25■□□□□ 0.67
TRIM47-207ENST00000593089 ART3Q13508 389 aa19.25■□□□□ 0.67
TRIM47-207ENST00000593089 USP10Q14694 798 aaKnown RBP19.25■□□□□ 0.67
TRIM47-207ENST00000593089 HP1BP3Q5SSJ5 553 aaPredicted RBP19.25■□□□□ 0.67
TRIM47-207ENST00000593089 TEDDM1Q5T9Z0 273 aa19.25■□□□□ 0.67
TRIM47-207ENST00000593089 SPINK14Q6IE38 97 aa19.25■□□□□ 0.67
TRIM47-207ENST00000593089 AFAP1L2Q8N4X5 818 aa19.25■□□□□ 0.67
TRIM47-207ENST00000593089 OR4K1Q8NGD4 311 aa19.25■□□□□ 0.67
TRIM47-207ENST00000593089 CFAP36Q96G28 342 aa19.25■□□□□ 0.67
TRIM47-207ENST00000593089 NAT9Q9BTE0 207 aa19.25■□□□□ 0.67
TRIM47-207ENST00000593089 SPNS1Q9H2V7 528 aa19.25■□□□□ 0.67
TRIM47-207ENST00000593089 TRBC2A0A5B9 178 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 GABRR3A8MPY1 467 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 CHST10O43529 356 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 SLC19A2O60779 497 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 ZNF888P0CJ79 500 aaPredicted RBP19.24■□□□□ 0.67
TRIM47-207ENST00000593089 ALOX12P18054 663 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 EEF1DP29692 281 aaKnown RBP19.24■□□□□ 0.67
TRIM47-207ENST00000593089 TAS2R50P59544 299 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 OC90Q02509 493 aaPredicted RBP19.24■□□□□ 0.67
TRIM47-207ENST00000593089 RGS1Q08116 209 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 PWP1Q13610 501 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 CSHL1Q14406 222 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.24■□□□□ 0.67
TRIM47-207ENST00000593089 FAM45BPQ6NSW5 357 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 MCEMP1Q8IX19 187 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 TBC1D19Q8N5T2 526 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 SLC5A8Q8N695 610 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 FAM45AQ8TCE6 357 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 SLC5A11Q8WWX8 675 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 ATL1Q8WXF7 558 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 NEIL2Q969S2 332 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 TBC1D20Q96BZ9 403 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 FBXL8Q96CD0 374 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 TSNARE1Q96NA8 513 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 OLFM1Q99784 485 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 SARGQ9BW04 601 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 TSPAN10Q9H1Z9 355 aaPredicted RBP19.24■□□□□ 0.67
TRIM47-207ENST00000593089 PLAC1Q9HBJ0 212 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 SNX12Q9UMY4 172 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 CHMP2BQ9UQN3 213 aa19.24■□□□□ 0.67
TRIM47-207ENST00000593089 PCDHGB6Q9Y5F9 930 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms