RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 GALR3O60755 368 aaPredicted RBP17.77■□□□□ 0.44
CCDC43-205ENST00000592333 CDH1P12830 882 aa17.77■□□□□ 0.44
CCDC43-205ENST00000592333 AHRP35869 848 aa17.77■□□□□ 0.44
CCDC43-205ENST00000592333 SNRPNP63162 240 aaKnown RBP17.77■□□□□ 0.44
CCDC43-205ENST00000592333 RHAGQ02094 409 aa17.77■□□□□ 0.44
CCDC43-205ENST00000592333 MORF4L2Q15014 288 aa17.77■□□□□ 0.44
CCDC43-205ENST00000592333 NSDHLQ15738 373 aa17.77■□□□□ 0.44
CCDC43-205ENST00000592333 KRTCAP3Q53RY4 240 aa17.77■□□□□ 0.44
CCDC43-205ENST00000592333 ZNF766Q5HY98 468 aa17.77■□□□□ 0.44
CCDC43-205ENST00000592333 TEDDM1Q5T9Z0 273 aa17.77■□□□□ 0.44
CCDC43-205ENST00000592333 PDSS2Q86YH6 399 aa17.77■□□□□ 0.44
CCDC43-205ENST00000592333 SLC5A8Q8N695 610 aa17.77■□□□□ 0.44
CCDC43-205ENST00000592333 THAP3Q8WTV1 239 aaPredicted RBP17.77■□□□□ 0.44
CCDC43-205ENST00000592333 KCNK13Q9HB14 408 aa17.77■□□□□ 0.44
CCDC43-205ENST00000592333 ZFP69BQ9UJL9 534 aa17.77■□□□□ 0.44
CCDC43-205ENST00000592333 SH2B3Q9UQQ2 575 aa17.77■□□□□ 0.44
CCDC43-205ENST00000592333 SCN2AQ99250 2005 aa17.77■□□□□ 0.43
CCDC43-205ENST00000592333 A8MUI8 341 aa17.76■□□□□ 0.43
CCDC43-205ENST00000592333 TTI1O43156 1089 aa17.76■□□□□ 0.43
CCDC43-205ENST00000592333 UNC5CO95185 931 aa17.76■□□□□ 0.43
CCDC43-205ENST00000592333 TCP1P17987 556 aaKnown RBP17.76■□□□□ 0.43
CCDC43-205ENST00000592333 ALOX12P18054 663 aa17.76■□□□□ 0.43
CCDC43-205ENST00000592333 IVDP26440 423 aa17.76■□□□□ 0.43
CCDC43-205ENST00000592333 CA7P43166 264 aa17.76■□□□□ 0.43
CCDC43-205ENST00000592333 CASP6P55212 293 aa17.76■□□□□ 0.43
CCDC43-205ENST00000592333 TAS2R50P59544 299 aa17.76■□□□□ 0.43
CCDC43-205ENST00000592333 ACTN3Q08043 901 aaPredicted RBP17.76■□□□□ 0.43
CCDC43-205ENST00000592333 RGS1Q08116 209 aa17.76■□□□□ 0.43
CCDC43-205ENST00000592333 ABRAXAS2Q15018 415 aa17.76■□□□□ 0.43
CCDC43-205ENST00000592333 RBM20Q5T481 1227 aaKnown RBP17.76■□□□□ 0.43
CCDC43-205ENST00000592333 HECTD2Q5U5R9 776 aa17.76■□□□□ 0.43
CCDC43-205ENST00000592333 SP5Q6BEB4 398 aaPredicted RBP17.76■□□□□ 0.43
CCDC43-205ENST00000592333 RPTNQ6XPR3 784 aa17.76■□□□□ 0.43
CCDC43-205ENST00000592333 ABHD13Q7L211 337 aa17.76■□□□□ 0.43
CCDC43-205ENST00000592333 SLC35F6Q8N357 371 aa17.76■□□□□ 0.43
CCDC43-205ENST00000592333 NT5CQ8TCD5 201 aa17.76■□□□□ 0.43
CCDC43-205ENST00000592333 TBC1D20Q96BZ9 403 aa17.76■□□□□ 0.43
CCDC43-205ENST00000592333 MACROD1Q9BQ69 325 aa17.76■□□□□ 0.43
CCDC43-205ENST00000592333 UTP23Q9BRU9 249 aaKnown RBP17.76■□□□□ 0.43
CCDC43-205ENST00000592333 LANCL2Q9NS86 450 aa17.76■□□□□ 0.43
CCDC43-205ENST00000592333 IGHV3-20A0A0C4DH32 117 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 NDUFS4O43181 175 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 OR1F1O43749 312 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 RDH16O75452 317 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 FHP07954 510 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 CD46P15529 392 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 MST1P26927 711 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 KCNK10P57789 538 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 CDKL1Q00532 357 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 TUBA3CQ13748 450 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 CSHL1Q14406 222 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 USP10Q14694 798 aaKnown RBP17.75■□□□□ 0.43
CCDC43-205ENST00000592333 ZXDCQ2QGD7 858 aaPredicted RBP17.75■□□□□ 0.43
CCDC43-205ENST00000592333 MSS51Q4VC12 460 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 SFT2D3Q587I9 215 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 TUBA3EQ6PEY2 450 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 PAPD4Q6PIY7 484 aaKnown RBP17.75■□□□□ 0.43
CCDC43-205ENST00000592333 MBOAT1Q6ZNC8 495 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 BEST3Q8N1M1 668 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 ZNF808Q8N4W9 903 aaPredicted RBP17.75■□□□□ 0.43
CCDC43-205ENST00000592333 TMEM178AQ8NBL3 297 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 ZNF740Q8NDX6 193 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 MDS2Q8NDY4 140 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 TRPV3Q8NET8 790 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 ZCCHC10Q8TBK6 192 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 SCMH1Q96GD3 660 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 OR4K3Q96R72 315 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 PELI2Q9HAT8 420 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 CROCCQ5TZA2 2017 aa17.75■□□□□ 0.43
CCDC43-205ENST00000592333 ASPDHA6ND91 283 aa17.74■□□□□ 0.43
CCDC43-205ENST00000592333 F10P00742 488 aa17.74■□□□□ 0.43
CCDC43-205ENST00000592333 STATHP02808 62 aa17.74■□□□□ 0.43
CCDC43-205ENST00000592333 AGAP20933 346 aa17.74■□□□□ 0.43
CCDC43-205ENST00000592333 SCTRP47872 440 aa17.74■□□□□ 0.43
CCDC43-205ENST00000592333 CBLBQ13191 982 aa17.74■□□□□ 0.43
CCDC43-205ENST00000592333 BBS9Q3SYG4 887 aa17.74■□□□□ 0.43
CCDC43-205ENST00000592333 STEAP4Q687X5 459 aa17.74■□□□□ 0.43
CCDC43-205ENST00000592333 QSOX2Q6ZRP7 698 aa17.74■□□□□ 0.43
CCDC43-205ENST00000592333 NKAPQ8N5F7 415 aaKnown RBP17.74■□□□□ 0.43
CCDC43-205ENST00000592333 FAM98AQ8NCA5 519 aaKnown RBP17.74■□□□□ 0.43
CCDC43-205ENST00000592333 ELP5Q8TE02 316 aa17.74■□□□□ 0.43
CCDC43-205ENST00000592333 ITLN2Q8WWU7 325 aaPredicted RBP17.74■□□□□ 0.43
CCDC43-205ENST00000592333 SLC5A11Q8WWX8 675 aa17.74■□□□□ 0.43
CCDC43-205ENST00000592333 ALKBH8Q96BT7 664 aaKnown RBP17.74■□□□□ 0.43
CCDC43-205ENST00000592333 PYCR2Q96C36 320 aa17.74■□□□□ 0.43
CCDC43-205ENST00000592333 PEX11GQ96HA9 241 aa17.74■□□□□ 0.43
CCDC43-205ENST00000592333 DDX47Q9H0S4 455 aaKnown RBP17.74■□□□□ 0.43
CCDC43-205ENST00000592333 CHST11Q9NPF2 352 aa17.74■□□□□ 0.43
CCDC43-205ENST00000592333 PPANQ9NQ55 473 aaKnown RBP17.74■□□□□ 0.43
CCDC43-205ENST00000592333 LRBAP50851 2863 aa17.73■□□□□ 0.43
CCDC43-205ENST00000592333 ABCA12Q86UK0 2595 aa17.73■□□□□ 0.43
CCDC43-205ENST00000592333 TRGV8A0A0C4DH27 118 aa17.73■□□□□ 0.43
CCDC43-205ENST00000592333 NDC80O14777 642 aa17.73■□□□□ 0.43
CCDC43-205ENST00000592333 EEF1DP29692 281 aaKnown RBP17.73■□□□□ 0.43
CCDC43-205ENST00000592333 CD96P40200 585 aa17.73■□□□□ 0.43
CCDC43-205ENST00000592333 HNMTP50135 292 aa17.73■□□□□ 0.43
CCDC43-205ENST00000592333 OR4D2P58180 307 aa17.73■□□□□ 0.43
CCDC43-205ENST00000592333 OR1C1Q15619 314 aa17.73■□□□□ 0.43
CCDC43-205ENST00000592333 XKRXQ6PP77 449 aa17.73■□□□□ 0.43
CCDC43-205ENST00000592333 SBSNQ6UWP8 590 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms