RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 PGDP52209 483 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 STXBP1P61764 594 aaKnown RBP9.56□□□□□ -0.88
BRCA1-227ENST00000591849 MAT1AQ00266 395 aaKnown RBP9.56□□□□□ -0.88
BRCA1-227ENST00000591849 KLC1Q07866 573 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 CHIT1Q13231 466 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 SLC29A2Q14542 456 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 PFKFB4Q16877 469 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 TSNAXIP1Q2TAA8 658 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 TOR1AIP1Q5JTV8 583 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 CPZQ66K79 652 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 ATG9BQ674R7 924 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 FAAH2Q6GMR7 532 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 TMEM214Q6NUQ4 689 aaKnown RBP9.56□□□□□ -0.88
BRCA1-227ENST00000591849 NIPAL1Q6NVV3 410 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 TMIGD1Q6UXZ0 262 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 SLCO4C1Q6ZQN7 724 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 ASB18Q6ZVZ8 466 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 LRRC70Q7Z2Q7 622 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 PRICKLE2Q7Z3G6 844 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 KLHDC8AQ8IYD2 350 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 TEX9Q8N6V9 391 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 EIF1ADQ8N9N8 165 aaKnown RBP9.56□□□□□ -0.88
BRCA1-227ENST00000591849 TEX19Q8NA77 164 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 PDPRQ8NCN5 879 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 RHEBL1Q8TAI7 183 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 ADAMTS17Q8TE56 1095 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 DCAKDQ8WVC6 231 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 METTL21AQ8WXB1 218 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 UBE2E3Q969T4 207 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 ATP6V1E2Q96A05 226 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 NACC2Q96BF6 587 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 MTBPQ96DY7 904 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 TM4SF19Q96DZ7 209 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 TMEM79Q9BSE2 394 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 EFCAB11Q9BUY7 163 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 SYNPO2LQ9H987 977 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 HCN3Q9P1Z3 774 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 MKL2Q9ULH7 1088 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 MRPS2Q9Y399 296 aaKnown RBP9.56□□□□□ -0.88
BRCA1-227ENST00000591849 NAALAD2Q9Y3Q0 740 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 TNPO3Q9Y5L0 923 aaKnown RBP9.56□□□□□ -0.88
BRCA1-227ENST00000591849 SLC22A7Q9Y694 548 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 TLN1Q9Y490 2541 aaKnown RBP9.56□□□□□ -0.88
BRCA1-227ENST00000591849 PTPN13Q12923 2485 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 A0A088AWK7 358 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 HMX2A2RU54 273 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 VSTM2BA6NLU5 285 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 ESPNB1AK53 854 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 B8ZZF3 427 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 J3QKU1 62 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 K7EPI3 171 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 AGPSO00116 658 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 PSMD12O00232 456 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-227ENST00000591849 RDH16O75452 317 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 SLU7O95391 586 aaKnown RBP9.55□□□□□ -0.88
BRCA1-227ENST00000591849 ALPPP05187 535 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 ZNF888P0CJ79 500 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-227ENST00000591849 PCNAP12004 261 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 COL6A2P12110 1019 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 ACPPP15309 386 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 EPB42P16452 691 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 ALOX12P18054 663 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 ZNF10P21506 573 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-227ENST00000591849 AGTR2P50052 363 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 RAB8AP61006 207 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 TGM3Q08188 693 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 RAPSNQ13702 412 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 DOC2AQ14183 400 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 SYT16Q17RD7 645 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 TUBB8Q3ZCM7 444 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 MINDY4Q4G0A6 757 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 DEFB134Q4QY38 66 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 DCAF10Q5QP82 559 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 TCTN3Q6NUS6 607 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 ADGRD1Q6QNK2 874 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 PPP1R32Q7Z5V6 425 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 PARP9Q8IXQ6 854 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 CENPLQ8N0S6 344 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-227ENST00000591849 CNPY4Q8N129 248 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 OR51Q1Q8NH59 317 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 NT5CQ8TCD5 201 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.55□□□□□ -0.88
BRCA1-227ENST00000591849 MOCOSQ96EN8 888 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 PTCD3Q96EY7 689 aaKnown RBP9.55□□□□□ -0.88
BRCA1-227ENST00000591849 ATOH8Q96SQ7 321 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 SPSB2Q99619 263 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 SARGQ9BW04 601 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 TRIM55Q9BYV6 548 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 PITHD1Q9GZP4 211 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-227ENST00000591849 SPNS1Q9H2V7 528 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 RHBGQ9H310 441 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 EHD1Q9H4M9 534 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 NT5DC2Q9H857 520 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 GPR83Q9NYM4 423 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 PSMC3IPQ9P2W1 217 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-227ENST00000591849 FBXL4Q9UKA2 621 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 TMCO1Q9UM00 188 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 TP53TG5Q9Y2B4 290 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 ZNF451Q9Y4E5 1061 aa9.55□□□□□ -0.88
BRCA1-227ENST00000591849 IGLV3-12A0A075B6K2 115 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms