RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 PLD3Q8IV08 490 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 ANKMY2Q8IV38 441 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 CPNE9Q8IYJ1 553 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 OR9A4Q8NGU2 314 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 MCOLN3Q8TDD5 553 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 METTL21AQ8WXB1 218 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 AARSD1Q9BTE6 412 aaKnown RBP9.83□□□□□ -0.84
VPS4B-207ENST00000591519 SARGQ9BW04 601 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 VN1R1Q9GZP7 353 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 C20orf96Q9NUD7 363 aaPredicted RBP9.83□□□□□ -0.84
VPS4B-207ENST00000591519 TEKT2Q9UIF3 430 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 CHMP2BQ9UQN3 213 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 OR5H15A6NDH6 313 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 CDK2AP1O14519 115 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 SLC16A5O15375 505 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 HNRNPRO43390 633 aaKnown RBP9.82□□□□□ -0.84
VPS4B-207ENST00000591519 PRAMEF2O60811 474 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 SEC31AO94979 1220 aaKnown RBP9.82□□□□□ -0.84
VPS4B-207ENST00000591519 RASAL1O95294 804 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 C8GP07360 202 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 NPPBP16860 134 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 IL10P22301 178 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 CCND1P24385 295 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 ELK3P41970 407 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 AGTR2P50052 363 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 ARL4CP56559 192 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 MAT1AQ00266 395 aaKnown RBP9.82□□□□□ -0.84
VPS4B-207ENST00000591519 SLC7A5Q01650 507 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 EEF1A2Q05639 463 aaKnown RBP9.82□□□□□ -0.84
VPS4B-207ENST00000591519 ART3Q13508 389 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 MORF4L2Q15014 288 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 HSP90AA5PQ58FG0 334 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 THEMIS2Q5TEJ8 643 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 ABHD17BQ5VST6 288 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 HIBCHQ6NVY1 386 aaPredicted RBP9.82□□□□□ -0.84
VPS4B-207ENST00000591519 CAPN12Q6ZSI9 719 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 PIWIL4Q7Z3Z4 852 aaKnown RBP9.82□□□□□ -0.84
VPS4B-207ENST00000591519 ADCK2Q7Z695 626 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 IGDCC3Q8IVU1 814 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 CAMKVQ8NCB2 501 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 C2CD4AQ8NCU7 369 aaPredicted RBP9.82□□□□□ -0.84
VPS4B-207ENST00000591519 PLPP5Q8NEB5 264 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 ABHD11Q8NFV4 315 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 OR4K1Q8NGD4 311 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 OR51Q1Q8NH59 317 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 EEF1AKMT1Q8WVE0 214 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 SGPP1Q9BX95 441 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.82□□□□□ -0.84
VPS4B-207ENST00000591519 PARVBQ9HBI1 364 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 CCDC177Q9NQR7 707 aaPredicted RBP9.82□□□□□ -0.84
VPS4B-207ENST00000591519 IARS2Q9NSE4 1012 aaKnown RBP9.82□□□□□ -0.84
VPS4B-207ENST00000591519 PDE10AQ9Y233 779 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 SLC22A7Q9Y694 548 aa9.82□□□□□ -0.84
VPS4B-207ENST00000591519 LCMT2O60294 686 aaKnown RBP9.81□□□□□ -0.84
VPS4B-207ENST00000591519 PGAM1P18669 254 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 MST1P26927 711 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 GABRB3P28472 473 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 RGS4P49798 205 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 KCNK10P57789 538 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 MPP1Q00013 466 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 PDIA2Q13087 525 aaKnown RBP9.81□□□□□ -0.84
VPS4B-207ENST00000591519 CALCOCO2Q13137 446 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 SP140Q13342 867 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 ZXDCQ2QGD7 858 aaPredicted RBP9.81□□□□□ -0.84
VPS4B-207ENST00000591519 AGTRAPQ6RW13 159 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 PAQR3Q6TCH7 311 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 LCTLQ6UWM7 567 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 TMEM207Q6UWW9 146 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 GFRALQ6UXV0 394 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 PRSS41Q7RTY9 318 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 MAATS1Q7Z4T9 603 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 FJX1Q86VR8 437 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 SHISA5Q8N114 240 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 PDIK1LQ8N165 341 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 AFAP1L2Q8N4X5 818 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 AMER2Q8N7J2 671 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.81□□□□□ -0.84
VPS4B-207ENST00000591519 KCT2Q8NC54 265 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 SUN3Q8TAQ9 357 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 M1APQ8TC57 530 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 ZNF354BQ96LW1 612 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 MAGEB10Q96LZ2 347 aaPredicted RBP9.81□□□□□ -0.84
VPS4B-207ENST00000591519 ERP44Q9BS26 406 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 FAM167BQ9BTA0 163 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 PPANQ9NQ55 473 aaKnown RBP9.81□□□□□ -0.84
VPS4B-207ENST00000591519 ABCF3Q9NUQ8 709 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 TAS2R13Q9NYV9 303 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 SLC17A6Q9P2U8 582 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 COPG2Q9UBF2 871 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 C19orf25Q9UFG5 118 aaPredicted RBP9.81□□□□□ -0.84
VPS4B-207ENST00000591519 ADAMTS6Q9UKP5 1117 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 KLF2Q9Y5W3 355 aaPredicted RBP9.81□□□□□ -0.84
VPS4B-207ENST00000591519 SCN3AQ9NY46 2000 aa9.81□□□□□ -0.84
VPS4B-207ENST00000591519 ESYT3A0FGR9 886 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 SEC24DO94855 1032 aaPredicted RBP9.8□□□□□ -0.84
VPS4B-207ENST00000591519 TTC4O95801 387 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 F10P00742 488 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 AHSGP02765 367 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 XCR1P46094 333 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 TBPL1P62380 186 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms