RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 SAMD4AQ9UPU9 718 aaKnown RBP10.82□□□□□ -0.68
LIG3-204ENST00000585740 SH2B3Q9UQQ2 575 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 OR1A2Q9Y585 309 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 PCYT1BQ9Y5K3 369 aaPredicted RBP10.82□□□□□ -0.68
LIG3-204ENST00000585740 A0A1W2PQF6 199 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 ARHGAP10A1A4S6 786 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 GABRR3A8MPY1 467 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 TBX19O60806 448 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 ADAM23O75077 832 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 HPRP00739 348 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 TGFB1P01137 390 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 GSNP06396 782 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 CEACAM5P06731 702 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 ABCB1P08183 1280 aaPredicted RBP10.81□□□□□ -0.68
LIG3-204ENST00000585740 LAMP1P11279 417 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 ZNF23P17027 643 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 ENGP17813 658 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 GSTM2P28161 218 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 NDUFS1P28331 727 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 PKLRP30613 574 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 RAB28P51157 221 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 ABATP80404 500 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 EPS8Q12929 822 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 PDE7AQ13946 482 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 VEZF1Q14119 521 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 KRT33BQ14525 404 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 COL19A1Q14993 1142 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 RBBP5Q15291 538 aaKnown RBP10.81□□□□□ -0.68
LIG3-204ENST00000585740 PYCR3Q53H96 274 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 NHSL2Q5HYW2 709 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 DEPDC1Q5TB30 811 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 FAM71E1Q6IPT2 247 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 KRT80Q6KB66 452 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 TRIM69Q86WT6 500 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 CARM1Q86X55 608 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 EPHX4Q8IUS5 362 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 ADHFE1Q8IWW8 467 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 PHACTR4Q8IZ21 702 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 TBC1D19Q8N5T2 526 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 SMRP1Q8NCR6 262 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 OR4K1Q8NGD4 311 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 OR2L8Q8NGY9 312 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 GOT1L1Q8NHS2 421 aaPredicted RBP10.81□□□□□ -0.68
LIG3-204ENST00000585740 FBXO30Q8TB52 745 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.81□□□□□ -0.68
LIG3-204ENST00000585740 C16orf78Q8WTQ4 265 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 KLK6Q92876 244 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 PPCDCQ96CD2 204 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 VPS50Q96JG6 964 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 CAMK1GQ96NX5 476 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 OSGEPL1Q9H4B0 414 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 TM7SF3Q9NS93 570 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 SH3BP4Q9P0V3 963 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 TAC3Q9UHF0 121 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 CD207Q9UJ71 328 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 ADAM29Q9UKF5 820 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 PLAGL1Q9UM63 463 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 OAZ3Q9UMX2 235 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 PIAS3Q9Y6X2 628 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 NUP214P35658 2090 aaPredicted RBP10.81□□□□□ -0.68
LIG3-204ENST00000585740 MYO10Q9HD67 2058 aa10.81□□□□□ -0.68
LIG3-204ENST00000585740 HEATR5BQ9P2D3 2071 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 FAM149AA5PLN7 773 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 PRR23AA6NEV1 266 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 PRR19A6NJB7 356 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 LRRC72A6NJI9 287 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 H3BQ06 376 aaPredicted RBP10.8□□□□□ -0.68
LIG3-204ENST00000585740 TOR1BO14657 336 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 ACOX3O15254 700 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 ABCB7O75027 752 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 APBB3O95704 486 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 FURINP09958 794 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 SOX11P35716 441 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 LTBRP36941 435 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 RPS9P46781 194 aaKnown RBP10.8□□□□□ -0.68
LIG3-204ENST00000585740 RXRGP48443 463 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 C2orf80Q0P641 193 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 MERTKQ12866 999 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 VMACQ2NL98 169 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 UAP1L1Q3KQV9 507 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 PUS10Q3MIT2 529 aaKnown RBP10.8□□□□□ -0.68
LIG3-204ENST00000585740 ARMCX6Q7L4S7 300 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 GPR155Q7Z3F1 870 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 SLC9B2Q86UD5 537 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 DHRSXQ8N5I4 330 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 OR4A15Q8NGL6 344 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 FAM110BQ8TC76 370 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 TFAP2CQ92754 450 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 TBC1D20Q96BZ9 403 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 PYURFQ96I23 114 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 OR2M4Q96R27 311 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 INSM2Q96T92 566 aaPredicted RBP10.8□□□□□ -0.68
LIG3-204ENST00000585740 MENTQ9BUN1 341 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 ADI1Q9BV57 179 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 OSBPL10Q9BXB5 764 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 MS4A8Q9BY19 250 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 OR51B5Q9H339 312 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 TPT1P8Q9HAU6 139 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 AASDHPPTQ9NRN7 309 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 SLC6A13Q9NSD5 602 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms