RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 TRPV3Q8NET8 790 aa16.89■□□□□ 0.29
SRSF1-209ENST00000585096 NT5CQ8TCD5 201 aa16.89■□□□□ 0.29
SRSF1-209ENST00000585096 BRIX1Q8TDN6 353 aaKnown RBP16.89■□□□□ 0.29
SRSF1-209ENST00000585096 OR1F2PQ96R84 312 aa16.89■□□□□ 0.29
SRSF1-209ENST00000585096 RBBP8Q99708 897 aa16.89■□□□□ 0.29
SRSF1-209ENST00000585096 CAB39LQ9H9S4 337 aa16.89■□□□□ 0.29
SRSF1-209ENST00000585096 PTGFRNQ9P2B2 879 aa16.89■□□□□ 0.29
SRSF1-209ENST00000585096 CSAG2Q9Y5P2 127 aa16.89■□□□□ 0.29
SRSF1-209ENST00000585096 SPENQ96T58 3664 aaKnown RBP16.88■□□□□ 0.29
SRSF1-209ENST00000585096 DYTNA2CJ06 578 aa16.88■□□□□ 0.29
SRSF1-209ENST00000585096 GALR3O60755 368 aaPredicted RBP16.88■□□□□ 0.29
SRSF1-209ENST00000585096 H2AFYO75367 372 aaKnown RBP16.88■□□□□ 0.29
SRSF1-209ENST00000585096 AGFG2O95081 481 aa16.88■□□□□ 0.29
SRSF1-209ENST00000585096 GNAZP19086 355 aa16.88■□□□□ 0.29
SRSF1-209ENST00000585096 SPRP35270 261 aaPredicted RBP16.88■□□□□ 0.29
SRSF1-209ENST00000585096 SOX11P35716 441 aa16.88■□□□□ 0.29
SRSF1-209ENST00000585096 MAGEA4P43358 317 aa16.88■□□□□ 0.29
SRSF1-209ENST00000585096 TSFMP43897 325 aaKnown RBP16.88■□□□□ 0.29
SRSF1-209ENST00000585096 AGTR2P50052 363 aa16.88■□□□□ 0.29
SRSF1-209ENST00000585096 ATP6V0D1P61421 351 aa16.88■□□□□ 0.29
SRSF1-209ENST00000585096 ARG2P78540 354 aa16.88■□□□□ 0.29
SRSF1-209ENST00000585096 REEP5Q00765 189 aa16.88■□□□□ 0.29
SRSF1-209ENST00000585096 CDC16Q13042 620 aa16.88■□□□□ 0.29
SRSF1-209ENST00000585096 RBBP5Q15291 538 aaKnown RBP16.88■□□□□ 0.29
SRSF1-209ENST00000585096 TGFBIQ15582 683 aa16.88■□□□□ 0.29
SRSF1-209ENST00000585096 CPEB2Q7Z5Q1 589 aaKnown RBP16.88■□□□□ 0.29
SRSF1-209ENST00000585096 TCAIMQ8N3R3 496 aa16.88■□□□□ 0.29
SRSF1-209ENST00000585096 FBXO25Q8TCJ0 367 aa16.88■□□□□ 0.29
SRSF1-209ENST00000585096 PSMF1Q92530 271 aa16.88■□□□□ 0.29
SRSF1-209ENST00000585096 RHBDF1Q96CC6 855 aa16.88■□□□□ 0.29
SRSF1-209ENST00000585096 MOCOSQ96EN8 888 aa16.88■□□□□ 0.29
SRSF1-209ENST00000585096 IMMP1LQ96LU5 166 aa16.88■□□□□ 0.29
SRSF1-209ENST00000585096 GPR22Q99680 433 aa16.88■□□□□ 0.29
SRSF1-209ENST00000585096 CAPS2Q9BXY5 557 aa16.88■□□□□ 0.29
SRSF1-209ENST00000585096 RELNP78509 3460 aa16.87■□□□□ 0.29
SRSF1-209ENST00000585096 PHGDHO43175 533 aaKnown RBP16.87■□□□□ 0.29
SRSF1-209ENST00000585096 WDR47O94967 919 aa16.87■□□□□ 0.29
SRSF1-209ENST00000585096 WISP3O95389 354 aaPredicted RBP16.87■□□□□ 0.29
SRSF1-209ENST00000585096 CCDC166P0CW27 439 aa16.87■□□□□ 0.29
SRSF1-209ENST00000585096 STX2P32856 288 aa16.87■□□□□ 0.29
SRSF1-209ENST00000585096 EFNA3P52797 238 aa16.87■□□□□ 0.29
SRSF1-209ENST00000585096 GPX6P59796 221 aa16.87■□□□□ 0.29
SRSF1-209ENST00000585096 MRPL49Q13405 166 aaKnown RBP16.87■□□□□ 0.29
SRSF1-209ENST00000585096 ELOAQ14241 798 aaKnown RBP16.87■□□□□ 0.29
SRSF1-209ENST00000585096 NR6A1Q15406 480 aa16.87■□□□□ 0.29
SRSF1-209ENST00000585096 DEFB134Q4QY38 66 aa16.87■□□□□ 0.29
SRSF1-209ENST00000585096 CDKL4Q5MAI5 379 aa16.87■□□□□ 0.29
SRSF1-209ENST00000585096 GRTP1Q5TC63 336 aa16.87■□□□□ 0.29
SRSF1-209ENST00000585096 KLHDC8AQ8IYD2 350 aa16.87■□□□□ 0.29
SRSF1-209ENST00000585096 SIRT6Q8N6T7 355 aa16.87■□□□□ 0.29
SRSF1-209ENST00000585096 PEX11GQ96HA9 241 aa16.87■□□□□ 0.29
SRSF1-209ENST00000585096 BARD1Q99728 777 aaKnown RBP16.87■□□□□ 0.29
SRSF1-209ENST00000585096 SPNS1Q9H2V7 528 aa16.87■□□□□ 0.29
SRSF1-209ENST00000585096 CNOT10Q9H9A5 744 aaKnown RBP16.87■□□□□ 0.29
SRSF1-209ENST00000585096 CLK4Q9HAZ1 481 aaKnown RBP16.87■□□□□ 0.29
SRSF1-209ENST00000585096 TEKT2Q9UIF3 430 aa16.87■□□□□ 0.29
SRSF1-209ENST00000585096 LRRK2Q5S007 2527 aa16.87■□□□□ 0.29
SRSF1-209ENST00000585096 ZNF860A6NHJ4 632 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 NCF1BA6NI72 391 aaPredicted RBP16.86■□□□□ 0.29
SRSF1-209ENST00000585096 NCF1CA8MVU1 366 aaPredicted RBP16.86■□□□□ 0.29
SRSF1-209ENST00000585096 SEC24DO94855 1032 aaPredicted RBP16.86■□□□□ 0.29
SRSF1-209ENST00000585096 CBX6O95503 412 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 ZNF888P0CJ79 500 aaPredicted RBP16.86■□□□□ 0.29
SRSF1-209ENST00000585096 C1GALT1C1LP0DN25 315 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 NCF1P14598 390 aaPredicted RBP16.86■□□□□ 0.29
SRSF1-209ENST00000585096 JAK1P23458 1154 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 GDF5P43026 501 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 SLC6A12P48065 614 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 RAB10P61026 200 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 ZKSCAN8Q15776 578 aaPredicted RBP16.86■□□□□ 0.29
SRSF1-209ENST00000585096 EIF2S3LQ2VIR3 472 aaKnown RBP16.86■□□□□ 0.29
SRSF1-209ENST00000585096 ZDHHC24Q6UX98 284 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 LANCL3Q6ZV70 420 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 ANKRD37Q7Z713 158 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 GPSM1Q86YR5 675 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 SPATA6LQ8N4H0 392 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 PPM1NQ8N819 430 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 ANKRD53Q8N9V6 530 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 PLPP5Q8NEB5 264 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 OR5T3Q8NGG3 340 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 PRR7Q8TB68 274 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 HAS2Q92819 552 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 TBC1D20Q96BZ9 403 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 UNKQ9C0B0 810 aaKnown RBP16.86■□□□□ 0.29
SRSF1-209ENST00000585096 LRRC4CQ9HCJ2 640 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 GPRC5BQ9NZH0 403 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 PCM1Q15154 2024 aa16.86■□□□□ 0.29
SRSF1-209ENST00000585096 ANKRD12Q6UB98 2062 aa16.85■□□□□ 0.29
SRSF1-209ENST00000585096 IGHV3-20A0A0C4DH32 117 aa16.85■□□□□ 0.29
SRSF1-209ENST00000585096 ANKUB1A6NFN9 424 aa16.85■□□□□ 0.29
SRSF1-209ENST00000585096 CHST10O43529 356 aa16.85■□□□□ 0.29
SRSF1-209ENST00000585096 C1QAP02745 245 aa16.85■□□□□ 0.29
SRSF1-209ENST00000585096 FHP07954 510 aa16.85■□□□□ 0.29
SRSF1-209ENST00000585096 SERPINA6P08185 405 aa16.85■□□□□ 0.29
SRSF1-209ENST00000585096 CELA2AP08217 269 aa16.85■□□□□ 0.29
SRSF1-209ENST00000585096 ITGAMP11215 1152 aa16.85■□□□□ 0.29
SRSF1-209ENST00000585096 CD1DP15813 335 aa16.85■□□□□ 0.29
SRSF1-209ENST00000585096 ACTN3Q08043 901 aaPredicted RBP16.85■□□□□ 0.29
SRSF1-209ENST00000585096 NAB1Q13506 487 aa16.85■□□□□ 0.29
SRSF1-209ENST00000585096 ABRAXAS2Q15018 415 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms