RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 PSG6Q00889 435 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 GPR17Q13304 367 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ITGB3BPQ13352 177 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 LARS2Q15031 903 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SYCP1Q15431 976 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 KIAA1755Q5JYT7 1200 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 C6orf10Q5SRN2 563 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 OTUD1Q5VV17 481 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 GGNBP1Q5YKI7 109 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PLA2G4FQ68DD2 849 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CAPRIN2Q6IMN6 1127 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CXCL17Q6UXB2 119 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SLC36A4Q6YBV0 504 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CATSPER3Q86XQ3 398 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 LAS2Q8IYD9 372 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ADGRF3Q8IZF5 1079 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 TEX9Q8N6V9 391 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ZNF611Q8N823 705 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 Q8N9P0 234 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CCDC112Q8NEF3 446 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ZFAND2BQ8WV99 257 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ELSPBP1Q96BH3 223 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 AP2M1Q96CW1 435 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 WDYHV1Q96HA8 205 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 VPS39Q96JC1 886 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 INPP5KQ9BT40 448 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SPXQ9BT56 116 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CARD6Q9BX69 1037 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ZBP1Q9H171 429 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 NOL11Q9H8H0 719 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 RNF121Q9H920 327 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 MBNL1Q9NR56 388 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 RCOR3Q9P2K3 495 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ADAM28Q9UKQ2 775 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 AGO2Q9UKV8 859 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PADI3Q9ULW8 664 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PCDHAC2Q9Y5I4 1007 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 NFS1Q9Y697 457 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SETXQ7Z333 2677 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SMIM30A4D0T7 59 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 OR2A25A4D2G3 310 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 OOEPA6NGQ2 149 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CD8B2A6NJW9 211 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 A8MZ25 164 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 TEX28O15482 410 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 GMFGO60234 142 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 FMO6PO60774 539 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 KCNJ13O60928 360 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 RECQL5O94762 991 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SLCO2B1O94956 709 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 MT-ATP6P00846 226 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SLC4A1P02730 911 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CALB1P05937 261 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CA3P07451 260 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PRSS2P07478 247 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 MMP2P08253 660 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 GOLGA8HP0CJ92 632 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ENO3P13929 434 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ZNF18P17022 549 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 TNFRSF4P43489 277 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 RPS18P62269 152 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 EGR4Q05215 589 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PPA1Q15181 289 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PCGF3Q3KNV8 242 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 TCTE1Q5JU00 501 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PLPP4Q5VZY2 271 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 JADE1Q6IE81 842 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ANKRD54Q6NXT1 300 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ALKAL1Q6UXT8 129 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 RBM43Q6ZSC3 357 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SLC9B2Q86UD5 537 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CCDC60Q8IWA6 550 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SAMD14Q8IZD0 417 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CRYBG2Q8N1P7 616 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 BBS5Q8N3I7 341 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 DTX3LQ8TDB6 740 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SLC35F5Q8WV83 523 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ORAI1Q96D31 301 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CDKN2AIPNLQ96HQ2 116 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 IGSF21Q96ID5 467 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ZNF830Q96NB3 372 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 MS4A10Q96PG2 267 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 FRG2BQ96QU4 278 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 NEU1Q99519 415 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 MSTO1Q9BUK6 570 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 TRIM9Q9C026 710 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 LHX5Q9H2C1 402 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SLCO5A1Q9H2Y9 848 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 MRPL44Q9H9J2 332 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 MID1IP1Q9NPA3 183 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 DMAC2Q9NW81 257 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 STRAPQ9Y3F4 350 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 GRIP1Q9Y3R0 1128 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 FNDC1Q4ZHG4 1894 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 GCN1Q92616 2671 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 VPS37CA5D8V6 355 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 TMEM202A6NGA9 273 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 LRRIQ4A6NIV6 560 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PRR23D1E9PI22 279 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 STMND1H3BQB6 276 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms