RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 GDF5P43026 501 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 HNMTP50135 292 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 MFAP5Q13361 173 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 KBTBD12Q3ZCT8 623 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 CRB2Q5IJ48 1285 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 LANCL3Q6ZV70 420 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 AFAP1L2Q8N4X5 818 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 FAM26EQ8N5C1 309 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 ANKRD53Q8N9V6 530 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 OR5T3Q8NGG3 340 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 DNAJB14Q8TBM8 379 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 BRIX1Q8TDN6 353 aaKnown RBP20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 PPP4R1Q8TF05 950 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 METTL21AQ8WXB1 218 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 RHBDF1Q96CC6 855 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 C16orf45Q96MC5 204 aaPredicted RBP20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 CYTH2Q99418 400 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 EPS8L2Q9H6S3 715 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 PELI2Q9HAT8 420 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 LRRC4CQ9HCJ2 640 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 RIC8BQ9NVN3 520 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 ZFP69BQ9UJL9 534 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 KCNE2Q9Y6J6 123 aa20.27■□□□□ 0.84
PPP4R1-228ENST00000584074 IGHV3-20A0A0C4DH32 117 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 DNAJB6O75190 326 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 FAM155BO75949 473 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 WDR47O94967 919 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 STMN1P16949 149 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 GLRBP48167 497 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 REEP5Q00765 189 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 RGS1Q08116 209 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 MRPL49Q13405 166 aaKnown RBP20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 HERC3Q15034 1050 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 TGFBIQ15582 683 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 DEFB134Q4QY38 66 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 SIRT6Q8N6T7 355 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 PPM1NQ8N819 430 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 NT5CQ8TCD5 201 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 CNDP1Q96KN2 507 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 LMF1Q96S06 567 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 AIF1LQ9BQI0 150 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 LRRC1Q9BTT6 524 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 RBCK1Q9BYM8 510 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 PTGFRNQ9P2B2 879 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 NTNG1Q9Y2I2 539 aa20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 COPG1Q9Y678 874 aaKnown RBP20.26■□□□□ 0.83
PPP4R1-228ENST00000584074 GALR3O60755 368 aaPredicted RBP20.25■□□□□ 0.83
PPP4R1-228ENST00000584074 SEC24DO94855 1032 aaPredicted RBP20.25■□□□□ 0.83
PPP4R1-228ENST00000584074 ZNF888P0CJ79 500 aaPredicted RBP20.25■□□□□ 0.83
PPP4R1-228ENST00000584074 ALOX12P18054 663 aa20.25■□□□□ 0.83
PPP4R1-228ENST00000584074 AHRP35869 848 aa20.25■□□□□ 0.83
PPP4R1-228ENST00000584074 GMPRP36959 345 aa20.25■□□□□ 0.83
PPP4R1-228ENST00000584074 SLC6A12P48065 614 aa20.25■□□□□ 0.83
PPP4R1-228ENST00000584074 CKAP4Q07065 602 aaKnown RBP20.25■□□□□ 0.83
PPP4R1-228ENST00000584074 RBBP5Q15291 538 aaKnown RBP20.25■□□□□ 0.83
PPP4R1-228ENST00000584074 OR4D1Q15615 310 aa20.25■□□□□ 0.83
PPP4R1-228ENST00000584074 GPSM1Q86YR5 675 aa20.25■□□□□ 0.83
PPP4R1-228ENST00000584074 FBF1Q8TES7 1133 aa20.25■□□□□ 0.83
PPP4R1-228ENST00000584074 PEX11GQ96HA9 241 aa20.25■□□□□ 0.83
PPP4R1-228ENST00000584074 IMMP1LQ96LU5 166 aa20.25■□□□□ 0.83
PPP4R1-228ENST00000584074 LRRK2Q5S007 2527 aa20.25■□□□□ 0.83
PPP4R1-228ENST00000584074 TAPBPO15533 448 aa20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 CDC123O75794 336 aaPredicted RBP20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 URI1O94763 535 aaPredicted RBP20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 ITGAMP11215 1152 aa20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 CD1DP15813 335 aa20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 SPRP35270 261 aaPredicted RBP20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 SOX11P35716 441 aa20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 HNF4AP41235 474 aa20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 RAB10P61026 200 aa20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 OLR1P78380 273 aa20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 ZKSCAN8Q15776 578 aaPredicted RBP20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 GRTP1Q5TC63 336 aa20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 C8orf74Q6P047 294 aa20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 SLCO4C1Q6ZQN7 724 aa20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 RIPOR1Q6ZS17 1223 aa20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 CPEB2Q7Z5Q1 589 aaKnown RBP20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 KLHDC8AQ8IYD2 350 aa20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 CATSPER1Q8NEC5 780 aa20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 UTP15Q8TED0 518 aaKnown RBP20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 UBXN10Q96LJ8 280 aa20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 TUBB6Q9BUF5 446 aa20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 SLC29A3Q9BZD2 475 aa20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 LANCL2Q9NS86 450 aa20.24■□□□□ 0.83
PPP4R1-228ENST00000584074 UTP20O75691 2785 aaKnown RBP20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 WFS1O76024 890 aa20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 CYC1P08574 325 aa20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 GNAZP19086 355 aa20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 STX2P32856 288 aa20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 RAB8AP61006 207 aa20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 ATP6V0D1P61421 351 aa20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 GUCY2DQ02846 1103 aa20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 HYAL2Q12891 473 aa20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 ZNF169Q14929 603 aaPredicted RBP20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 EFTUD2Q15029 972 aaKnown RBP eCLIP20.23■□□□□ 0.832e-9■■■□□ 18.9
PPP4R1-228ENST00000584074 NR6A1Q15406 480 aa20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 EIF2S3LQ2VIR3 472 aaKnown RBP20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 FBXO48Q5FWF7 155 aa20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 B3GNTL1Q67FW5 361 aaPredicted RBP20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 ANKRD37Q7Z713 158 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms