RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 NBPF5PQ86XG9 351 aaPredicted RBP3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 FAM71AQ8IYT1 594 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 GRK7Q8WTQ7 553 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 PSPC1Q8WXF1 523 aaKnown RBP3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 USP6NLQ92738 828 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 ARHGEF2Q92974 986 aaKnown RBP3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 SAAL1Q96ER3 474 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 SCRN2Q96FV2 425 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 THOC1Q96FV9 657 aaKnown RBP3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 SLC41A2Q96JW4 573 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 QRFPRQ96P65 431 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 FAM110AQ9BQ89 295 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 SELENOSQ9BQE4 189 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 NEURL2Q9BR09 285 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 CCDC77Q9BR77 488 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 FUZQ9BT04 418 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 MAK16Q9BXY0 300 aaKnown RBP3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 DEFB129Q9H1M3 183 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 ST6GALNAC4Q9H4F1 302 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 DNAJC18Q9H819 358 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 BRF2Q9HAW0 419 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 CCDC177Q9NQR7 707 aaPredicted RBP3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 SAR1AQ9NR31 198 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 TAS2R14Q9NYV8 317 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 ADAM22Q9P0K1 906 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 LNPEPQ9UIQ6 1025 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 NAALADL1Q9UQQ1 740 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 COQ4Q9Y3A0 265 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 L3MBTL1Q9Y468 752 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 LYVE1Q9Y5Y7 322 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 WNK3Q9BYP7 1800 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 BAZ2BQ9UIF8 2168 aaKnown RBP3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 COL24A1Q17RW2 1714 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 DOT1LQ8TEK3 1739 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 CDK5RAP2Q96SN8 1893 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 NHSQ6T4R5 1651 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 FOCADQ5VW36 1801 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 ARFGEF1Q9Y6D6 1849 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 IGLV3-22A0A075B6J6 115 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 TEX13CA0A0J9YWL9 993 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 TMEM120BA0PK00 339 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 TRIM64A6NGJ6 449 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 TRIM64BA6NI03 449 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 RSPH10B2B2RC85 870 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 HHLA1C9JL84 531 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 FAM86B1E9PN63 330 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 NDC80O14777 642 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 SEC14L5O43304 696 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 CIDEAO60543 219 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 DIAPH2O60879 1101 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 CDH16O75309 829 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 GJB3O75712 270 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 DCTN3O75935 186 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 NEBLO76041 1014 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 GCNT3O95395 438 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 ADRB2P07550 413 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 SPARCP09486 303 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 FAM86B2P0C5J1 330 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 RSPH10BP0C881 870 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 FAM106CPP0CH98 169 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 UBL4AP11441 157 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 PAX7P23759 505 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 NFKBIAP25963 317 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 EPHA8P29322 1005 aaPredicted RBP3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 ADSSP30520 456 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 ABCD1P33897 745 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 RFC4P35249 363 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 HADHAP40939 763 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 EIF2DP41214 584 aaKnown RBP3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 SLC1A1P43005 524 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 CSNK2A1P68400 391 aaPredicted RBP3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 IL9RQ01113 521 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 RUNX1T1Q06455 604 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 FOXM1Q08050 763 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 EPS8Q12929 822 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 BFSP1Q12934 665 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 CALCOCO2Q13137 446 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 PTK6Q13882 451 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 QRICH1Q2TAL8 776 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 CRY2Q49AN0 593 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 CBWD6Q4V339 395 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 CBWD3Q5JTY5 395 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 C1orf220Q5T0J3 134 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 SEL1L2Q5TEA6 688 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 FAM53AQ6NSI3 398 aaPredicted RBP3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 CGB2Q6NT52 195 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 TATDN1Q6P1N9 297 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 PQLC2Q6ZP29 291 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 DNAAF5Q86Y56 855 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 NDUFAF2Q8N183 169 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 BEST3Q8N1M1 668 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 ARL10Q8N8L6 244 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 KCTD6Q8NC69 237 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 GMCL1P1Q8NEA9 526 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 CSNK2A3Q8NEV1 391 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 ZCCHC10Q8TBK6 192 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 ZFAND2BQ8WV99 257 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 FCAMRQ8WWV6 532 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 SHC3Q92529 594 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 KRT35Q92764 455 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms