RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 KHDRBS2Q5VWX1 349 aaKnown RBP11.47□□□□□ -0.57
CCDC57-216ENST00000582885 ASCL5Q7RTU5 278 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 ARHGAP22Q7Z5H3 698 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 VN1R4Q7Z5H5 301 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 ASPGQ86U10 573 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 D2HGDHQ8N465 521 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 ZNF655Q8N720 491 aaPredicted RBP11.47□□□□□ -0.57
CCDC57-216ENST00000582885 CAMKVQ8NCB2 501 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 CHTF18Q8WVB6 975 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 RERGQ96A58 199 aaPredicted RBP11.47□□□□□ -0.57
CCDC57-216ENST00000582885 C11orf24Q96F05 449 aaPredicted RBP11.47□□□□□ -0.57
CCDC57-216ENST00000582885 FCRL1Q96LA6 429 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 PPP1R36Q96LQ0 422 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 ZNF285Q96NJ3 590 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 SLC6A16Q9GZN6 736 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 ZMYND15Q9H091 742 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 KLHL25Q9H0H3 589 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 LRTM1Q9HBL6 345 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 FAM60AQ9NP50 221 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 ASIC5Q9NY37 505 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 AHSPQ9NZD4 102 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 TMEM9Q9P0T7 183 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 HEY2Q9UBP5 337 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 ATXN7L1Q9ULK2 861 aaPredicted RBP11.47□□□□□ -0.57
CCDC57-216ENST00000582885 SLC12A4Q9UP95 1085 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 PLCL2Q9UPR0 1127 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 A0A0J9YVX5 310 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 IGHV5-10-1A0A0J9YXX1 117 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 D6RAR5 112 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 H0YGG7 62 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 ZSCAN9O15535 394 aaPredicted RBP11.46□□□□□ -0.57
CCDC57-216ENST00000582885 PRAMEF10O60809 474 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 PEX11AO75192 247 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 SEC22BO75396 215 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 RASSF9O75901 435 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 ETHE1O95571 254 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 TGFB1P01137 390 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 SLC35G6P0C7Q6 338 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 ADSLP30566 484 aaPredicted RBP11.46□□□□□ -0.57
CCDC57-216ENST00000582885 MLLT3P42568 568 aaPredicted RBP11.46□□□□□ -0.57
CCDC57-216ENST00000582885 TSFMP43897 325 aaKnown RBP11.46□□□□□ -0.57
CCDC57-216ENST00000582885 ATP4BP51164 291 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 EMP3P54852 163 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 ARF3P61204 181 aaPredicted RBP11.46□□□□□ -0.57
CCDC57-216ENST00000582885 STXBP1P61764 594 aaKnown RBP11.46□□□□□ -0.57
CCDC57-216ENST00000582885 ZFP36L1Q07352 338 aaKnown RBP11.46□□□□□ -0.57
CCDC57-216ENST00000582885 RGS1Q08116 209 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 CYP4F3Q08477 520 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 TBL3Q12788 808 aaKnown RBP11.46□□□□□ -0.57
CCDC57-216ENST00000582885 SF3A3Q12874 501 aaKnown RBP eCLIP11.46□□□□□ -0.57
CCDC57-216ENST00000582885 SPIDRQ14159 915 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 GSTA3Q16772 222 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 RFTN2Q52LD8 501 aaPredicted RBP11.46□□□□□ -0.57
CCDC57-216ENST00000582885 TCTE1Q5JU00 501 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 SPDYAQ5MJ70 313 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 NXNQ6DKJ4 435 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 GALNT18Q6P9A2 607 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 TMPRSS9Q7Z410 1059 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 MCATQ8IVS2 390 aaKnown RBP11.46□□□□□ -0.57
CCDC57-216ENST00000582885 SLITRK4Q8IW52 837 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 METTL4Q8N3J2 472 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 RNF175Q8N4F7 328 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 CPSF7Q8N684 471 aaKnown RBP11.46□□□□□ -0.57
CCDC57-216ENST00000582885 SRFBP1Q8NEF9 429 aaKnown RBP11.46□□□□□ -0.57
CCDC57-216ENST00000582885 SLC13A3Q8WWT9 602 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 RGMAQ96B86 450 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 CENPKQ9BS16 269 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 NLNQ9BYT8 704 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 SYNPO2LQ9H987 977 aa11.46□□□□□ -0.57
CCDC57-216ENST00000582885 NOP53Q9NZM5 478 aaKnown RBP11.46□□□□□ -0.57
CCDC57-216ENST00000582885 RUVBL1Q9Y265 456 aaKnown RBP11.46□□□□□ -0.57
CCDC57-216ENST00000582885 PTPRBP23467 1997 aa11.46□□□□□ -0.58
CCDC57-216ENST00000582885 SEC16AO15027 2179 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 SCN2AQ99250 2005 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 LOC105369274A0A096LPK9 316 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 LOC102723532A0A0G2JNH3 316 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 URADA6NGE7 173 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 E9PBE3 544 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 TMX2-CTNND1H3BSU7 103 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 UBDO15205 165 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 SLC22A2O15244 555 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 NDUFS4O43181 175 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 KLHL41O60662 606 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 RFPL3O75679 317 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 SMIM10L1P0DMW3 83 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 PRPS2P11908 318 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 IDO1P14902 403 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 CSRP1P21291 193 aaKnown RBP11.45□□□□□ -0.58
CCDC57-216ENST00000582885 MAPK1P28482 360 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 ARL4DP49703 201 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 CYP4F2P78329 520 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 TGM3Q08188 693 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 ACSM2AQ08AH3 577 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 GALNTL6Q49A17 601 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 ACSM2BQ68CK6 577 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 FRMPD2BQ6IN97 320 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 FAM9CQ8IZT9 166 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 OR4N4Q8N0Y3 316 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 FNDC5Q8NAU1 212 aa11.45□□□□□ -0.58
CCDC57-216ENST00000582885 OR2L5Q8NG80 312 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms