RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 SERPINA6P08185 405 aa15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 FGF5P12034 268 aa15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 ITIH1P19827 911 aa15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 HOXD11P31277 338 aaPredicted RBP15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 ETV5P41161 510 aa15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 IL11RAQ14626 422 aa15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 PRTGQ2VWP7 1150 aa15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 SCIMPQ6UWF3 145 aa15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 TRIM46Q7Z4K8 759 aa15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 MARCH9Q86YJ5 346 aa15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 AFAP1L2Q8N4X5 818 aa15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 ZNF655Q8N720 491 aaPredicted RBP15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 OR8K5Q8NH50 307 aa15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 CCT6BQ92526 530 aa15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 CMTM7Q96FZ5 175 aa15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 FAR2Q96K12 515 aa15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 SLC6A16Q9GZN6 736 aa15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 BRF2Q9HAW0 419 aa15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 MARCOQ9UEW3 520 aaPredicted RBP15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 RARRES3Q9UL19 164 aa15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 RUVBL1Q9Y265 456 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-212ENST00000580061 PMS2P1A4D2B8 440 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 LRIT2A6NDA9 550 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 SLCO1B7G3V0H7 640 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 ZSCAN9O15535 394 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 SKAP2O75563 359 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 ETHE1O95571 254 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 JUNP05412 331 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 JMJD7P0C870 316 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 KITP10721 976 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 HSD3B1P14060 373 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 PTX3P26022 381 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 HSD3B2P26439 372 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 ID4P47928 161 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 HK2P52789 917 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 RGS1Q08116 209 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 CSTF3Q12996 717 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 GRM7Q14831 915 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 ADPRMQ3LIE5 342 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 C3orf38Q5JPI3 329 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 TMEM214Q6NUQ4 689 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 TLDC1Q6P9B6 456 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 DGLUCYQ7Z3D6 616 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 PPP1R3BQ86XI6 285 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 GPR135Q8IZ08 494 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 ARHGEF39Q8N4T4 335 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 GBP7Q8N8V2 638 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 KCT2Q8NC54 265 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 ZNF317Q96PQ6 595 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 CTRCQ99895 268 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 NLNQ9BYT8 704 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 AICDAQ9GZX7 198 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 PRM3Q9NNZ6 103 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 IRAK4Q9NWZ3 460 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 SLC39A1Q9NY26 324 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 PISDQ9UG56 409 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 SATB2Q9UPW6 733 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 PTGDR2Q9Y5Y4 395 aa15.15■□□□□ 0.02
CSNK1D-212ENST00000580061 SCN3AQ9NY46 2000 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 HYKKA2RU49 373 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 PIP5K1BO14986 540 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 HDAC3O15379 428 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 TIAF1O95411 115 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 VIMP08670 466 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 HNRNPH1P31943 449 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 LSP1P33241 339 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 GCGRP47871 477 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 MAPK10P53779 464 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 EMP3P54852 163 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 RAB15P59190 212 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 STXBP1P61764 594 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 BTKQ06187 659 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 CUL3Q13618 768 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 PDCD2Q16342 344 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 TOR1AIP1Q5JTV8 583 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 DEPDC1Q5TB30 811 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 GARNL3Q5VVW2 1013 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 KHDRBS2Q5VWX1 349 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 WDR75Q8IWA0 830 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 TTC29Q8NA56 475 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 PMEPA1Q969W9 287 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 MS4A6EQ96DS6 147 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 F2RL3Q96RI0 385 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 SERPINI1Q99574 410 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 CCT7Q99832 543 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 ACPTQ9BZG2 426 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 REXO4Q9GZR2 422 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 OR51B5Q9H339 312 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 KLHL31Q9H511 634 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 VTI1BQ9UEU0 232 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 CCL27Q9Y4X3 112 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 PCDHGA8Q9Y5G5 932 aa15.14■□□□□ 0.01
CSNK1D-212ENST00000580061 URADA6NGE7 173 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 SLC28A1O00337 649 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 ZNF195O14628 629 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 ZNF749O43361 778 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 SH3BGRLO75368 114 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 SCRG1O75711 98 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 MED26O95402 600 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 LINC00032P0C843 101 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms