RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 KIF2BQ8N4N8 673 aa8.41□□□□□ -1.06
GGA3-207ENST00000578896 GPATCH11Q8N954 259 aa8.41□□□□□ -1.06
GGA3-207ENST00000578896 MFSD9Q8NBP5 474 aa8.41□□□□□ -1.06
GGA3-207ENST00000578896 CALML6Q8TD86 181 aa8.41□□□□□ -1.06
GGA3-207ENST00000578896 CFAP36Q96G28 342 aa8.41□□□□□ -1.06
GGA3-207ENST00000578896 PBKQ96KB5 322 aa8.41□□□□□ -1.06
GGA3-207ENST00000578896 ZNF354BQ96LW1 612 aa8.41□□□□□ -1.06
GGA3-207ENST00000578896 OR4K3Q96R72 315 aa8.41□□□□□ -1.06
GGA3-207ENST00000578896 FAM167BQ9BTA0 163 aa8.41□□□□□ -1.06
GGA3-207ENST00000578896 SGPP1Q9BX95 441 aa8.41□□□□□ -1.06
GGA3-207ENST00000578896 RHBGQ9H310 441 aa8.41□□□□□ -1.06
GGA3-207ENST00000578896 CDCP1Q9H5V8 836 aa8.41□□□□□ -1.06
GGA3-207ENST00000578896 PARVBQ9HBI1 364 aa8.41□□□□□ -1.06
GGA3-207ENST00000578896 PLAC1Q9HBJ0 212 aa8.41□□□□□ -1.06
GGA3-207ENST00000578896 LANCL2Q9NS86 450 aa8.41□□□□□ -1.06
GGA3-207ENST00000578896 C19orf25Q9UFG5 118 aaPredicted RBP8.41□□□□□ -1.06
GGA3-207ENST00000578896 TINAGQ9UJW2 476 aa8.41□□□□□ -1.06
GGA3-207ENST00000578896 NPIPA1Q9UND3 350 aa8.41□□□□□ -1.06
GGA3-207ENST00000578896 OTOGQ6ZRI0 2925 aa8.41□□□□□ -1.06
GGA3-207ENST00000578896 ADGRG4Q8IZF6 3080 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 GABRR3A8MPY1 467 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 PGRMC1O00264 195 aaKnown RBP8.4□□□□□ -1.06
GGA3-207ENST00000578896 DNALI1O14645 258 aaPredicted RBP8.4□□□□□ -1.06
GGA3-207ENST00000578896 NDUFS4O43181 175 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 CHST10O43529 356 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 TSPAN12O95859 305 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 CRYABP02511 175 aaKnown RBP8.4□□□□□ -1.06
GGA3-207ENST00000578896 C8GP07360 202 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 HIST1H2AGP0C0S8 130 aaPredicted RBP8.4□□□□□ -1.06
GGA3-207ENST00000578896 ZNF888P0CJ79 500 aaPredicted RBP8.4□□□□□ -1.06
GGA3-207ENST00000578896 HIST1H2ADP20671 130 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 SAT1P21673 171 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 HRH2P25021 359 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 HTR1EP28566 365 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 CA7P43166 264 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 RGS4P49798 205 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 OR4D2P58180 307 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 RAB8AP61006 207 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 BTG2P78543 158 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 ADORA2A-AS1P86434 159 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 HSF1Q00613 529 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 OC90Q02509 493 aaPredicted RBP8.4□□□□□ -1.06
GGA3-207ENST00000578896 HYAL2Q12891 473 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 PTK6Q13882 451 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 USP10Q14694 798 aaKnown RBP8.4□□□□□ -1.06
GGA3-207ENST00000578896 PPP1R7Q15435 360 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 OR1C1Q15619 314 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 INAQ16352 499 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 DEFB134Q4QY38 66 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 HECTD2Q5U5R9 776 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 UGT3A1Q6NUS8 523 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 H3F3CQ6NXT2 135 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 TRMT10BQ6PF06 316 aaKnown RBP8.4□□□□□ -1.06
GGA3-207ENST00000578896 LCTLQ6UWM7 567 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 GALNTL5Q7Z4T8 443 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.4□□□□□ -1.06
GGA3-207ENST00000578896 PALM2Q8IXS6 379 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 LMNTD2Q8IXW0 634 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 SLC34A3Q8N130 599 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 MDS2Q8NDY4 140 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 PLPP5Q8NEB5 264 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 DNAJB8Q8NHS0 232 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 M1APQ8TC57 530 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 SREK1Q8WXA9 508 aaKnown RBP8.4□□□□□ -1.06
GGA3-207ENST00000578896 THAP11Q96EK4 314 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 SNF8Q96H20 258 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 HIST1H2AHQ96KK5 128 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 TSNARE1Q96NA8 513 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 OSBPL9Q96SU4 736 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 OLFM1Q99784 485 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 HIST1H2AJQ99878 128 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 UTP23Q9BRU9 249 aaKnown RBP8.4□□□□□ -1.06
GGA3-207ENST00000578896 H2AFJQ9BTM1 129 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 RNF32Q9H0A6 362 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 DDX47Q9H0S4 455 aaKnown RBP8.4□□□□□ -1.06
GGA3-207ENST00000578896 KLHL31Q9H511 634 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 PPANQ9NQ55 473 aaKnown RBP8.4□□□□□ -1.06
GGA3-207ENST00000578896 ARL15Q9NXU5 204 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 TAS2R13Q9NYV9 303 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 SUCOQ9UBS9 1254 aaKnown RBP8.4□□□□□ -1.06
GGA3-207ENST00000578896 ASIC3Q9UHC3 531 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 TEKT2Q9UIF3 430 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 CHMP2BQ9UQN3 213 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 JRKLQ9Y4A0 524 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 COMMD10Q9Y6G5 202 aa8.4□□□□□ -1.06
GGA3-207ENST00000578896 MTORP42345 2549 aa8.4□□□□□ -1.07
GGA3-207ENST00000578896 MED13LQ71F56 2210 aa8.39□□□□□ -1.07
GGA3-207ENST00000578896 SETD2Q9BYW2 2564 aaPredicted RBP8.39□□□□□ -1.07
GGA3-207ENST00000578896 CELSR1Q9NYQ6 3014 aa8.39□□□□□ -1.07
GGA3-207ENST00000578896 A0A0G2JN53 185 aa8.39□□□□□ -1.07
GGA3-207ENST00000578896 C4orf51C9J302 202 aa8.39□□□□□ -1.07
GGA3-207ENST00000578896 C19orf84I3L1E1 186 aa8.39□□□□□ -1.07
GGA3-207ENST00000578896 EIF3FO00303 357 aaPredicted RBP8.39□□□□□ -1.07
GGA3-207ENST00000578896 NDC80O14777 642 aa8.39□□□□□ -1.07
GGA3-207ENST00000578896 SLC16A5O15375 505 aa8.39□□□□□ -1.07
GGA3-207ENST00000578896 TTI1O43156 1089 aa8.39□□□□□ -1.07
GGA3-207ENST00000578896 GALR3O60755 368 aaPredicted RBP8.39□□□□□ -1.07
GGA3-207ENST00000578896 SLC19A2O60779 497 aa8.39□□□□□ -1.07
GGA3-207ENST00000578896 FHP07954 510 aa8.39□□□□□ -1.07
GGA3-207ENST00000578896 SLC35G6P0C7Q6 338 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms