RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	TRAV17	A0A0B4J275	112 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TCRBV16S1A1N1	A0A5B0	115 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	WASHC1	A8K0Z3	465 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CXorf49	A8MYA2	514 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	DNALI1	O14645	258 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MAP3K7	O43318	606 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PHF2	O75151	1096 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	IPO7	O95373	1038 aa	Known RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CAT	P04040	527 aa	Known RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	HEXB	P07686	556 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CCDC175	P0C221	793 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ZNF888	P0CJ79	500 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	C8orf89	P0DMQ9	161 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MAOA	P21397	527 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	VARS	P26640	1264 aa	Known RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TPP2	P29144	1249 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	HNRNPH1	P31943	449 aa	Known RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PTGER1	P34995	402 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SOX18	P35713	384 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	GDF5	P43026	501 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SLC6A12	P48065	614 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SLC26A5	P58743	744 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TAS2R39	P59534	338 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ABAT	P80404	500 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	REEP5	Q00765	189 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	OCA2	Q04671	838 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ZNF33B	Q06732	778 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TFF3	Q07654	80 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	DLG1	Q12959	904 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ART3	Q13508	389 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TSTA3	Q13630	321 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PTK6	Q13882	451 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	USP10	Q14694	798 aa	Known RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TRADD	Q15628	312 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	LONRF1	Q17RB8	773 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ZNF630	Q2M218	657 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	DEFB134	Q4QY38	66 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SFT2D3	Q587I9	215 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CMPK2	Q5EBM0	449 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	FBXO48	Q5FWF7	155 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	XKR6	Q5GH73	641 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	RNF187	Q5TA31	235 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	HECTD2	Q5U5R9	776 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ARMC3	Q5W041	872 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CCDC137	Q6PK04	289 aa	Known RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ADGRD1	Q6QNK2	874 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	LCTL	Q6UWM7	567 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	LYPD8	Q6UX82	237 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	C4orf22	Q6V702	233 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	C3P1	Q6ZMU1	363 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	DGAT2L6	Q6ZPD8	337 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SLCO4C1	Q6ZQN7	724 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	RIPOR1	Q6ZS17	1223 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MDGA2	Q7Z553	956 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ASPG	Q86U10	573 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	HOOK3	Q86VS8	718 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ZC3HC1	Q86WB0	502 aa	Known RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	DOLPP1	Q86YN1	238 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CREG2	Q8IUH2	290 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SCUBE1	Q8IWY4	988 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MCEMP1	Q8IX19	187 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	KLHDC8A	Q8IYD2	350 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SLC35F6	Q8N357	371 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CPSF7	Q8N684	471 aa	Known RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	BCORP1	Q8N888	145 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ZNF321P	Q8N8H1	164 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	NT5C	Q8TCD5	201 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ACTRT1	Q8TDG2	376 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SKA2	Q8WVK7	121 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MAGOHB	Q96A72	148 aa	Known RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	NTNG2	Q96CW9	530 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	LINGO1	Q96FE5	620 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SNF8	Q96H20	258 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PEX11G	Q96HA9	241 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	OSBPL9	Q96SU4	736 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CSF3R	Q99062	836 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	EBNA1BP2	Q99848	306 aa	Known RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TMEM79	Q9BSE2	394 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TUBB6	Q9BUF5	446 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	LIN28A	Q9H9Z2	209 aa	Known RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PARVB	Q9HBI1	364 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	XAB2	Q9HCS7	855 aa	Known RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MMP25	Q9NPA2	562 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	KLHL1	Q9NR64	748 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	C20orf96	Q9NUD7	363 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	C14orf105	Q9NVL8	296 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	RIC8B	Q9NVN3	520 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	STMN3	Q9NZ72	180 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MOCS1	Q9NZB8	636 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	KCMF1	Q9P0J7	381 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	COPG2	Q9UBF2	871 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ANAPC5	Q9UJX4	755 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ZNF490	Q9ULM2	529 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PPIE	Q9UNP9	301 aa	Known RBP	4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SLC22A7	Q9Y694	548 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MED12	Q93074	2177 aa		4.17	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PRRC2A	P48634	2157 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	NIPBL	Q6KC79	2804 aa	eCLIP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329		A0A0G2JN53	185 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MYOCOS	A0A1B0GUC4	107 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms